prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	0	21975	DBSCAN-SWA	tRNA	Planktothrix_phage(33.33%)	39	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	35900	38813	DBSCAN-SWA		Clostridium_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	59731	63177	DBSCAN-SWA		Bacillus_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	67499	77454	DBSCAN-SWA	protease	Clostridium_phage(40.0%)	9	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	87253	91050	DBSCAN-SWA		Emiliania_huxleyi_virus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	98704	99721	DBSCAN-SWA	tRNA	Moraxella_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	109057	111816	DBSCAN-SWA		Clostridioides_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	123427	125341	DBSCAN-SWA		Tupanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	132361	133549	DBSCAN-SWA		Orpheovirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	139279	143813	DBSCAN-SWA		Clostridium_phage(33.33%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	149984	156116	DBSCAN-SWA		uncultured_virus(50.0%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	161028	164457	DBSCAN-SWA		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	174603	190789	DBSCAN-SWA		Synechococcus_phage(23.08%)	14	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	209055	210147	DBSCAN-SWA		Moumouvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	229361	230063	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	235098	237036	DBSCAN-SWA		Catovirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	253315	255532	DBSCAN-SWA		Clostridium_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	262495	264007	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	277824	280600	DBSCAN-SWA		Streptococcus_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	288891	291598	DBSCAN-SWA		Staphylococcus_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	296955	302980	DBSCAN-SWA		Staphylococcus_phage(33.33%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	310838	311510	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	315268	316006	DBSCAN-SWA		Clostridioides_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	339938	340937	DBSCAN-SWA		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	353759	362176	DBSCAN-SWA	transposase	Paenibacillus_phage(33.33%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	376507	385286	DBSCAN-SWA		Streptococcus_phage(33.33%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	389304	389967	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	402157	402544	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	407106	414920	DBSCAN-SWA		Bacillus_phage(50.0%)	7	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	418592	422383	DBSCAN-SWA		Acanthocystis_turfacea_Chlorella_virus(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	425466	427501	DBSCAN-SWA		Bacillus_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	431854	433099	DBSCAN-SWA		Erythrobacter_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	439612	446181	DBSCAN-SWA		Hokovirus(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	455750	462990	DBSCAN-SWA		Streptococcus_phage(25.0%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	468312	469302	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	476146	477418	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	486286	487123	DBSCAN-SWA		Bodo_saltans_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	491050	493288	DBSCAN-SWA		Bodo_saltans_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	502399	507373	DBSCAN-SWA	tRNA,transposase	Tupanvirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	510779	512120	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	518420	520988	DBSCAN-SWA		Hokovirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	533127	542730	DBSCAN-SWA	coat	Streptococcus_phage(100.0%)	10	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	547340	548450	DBSCAN-SWA	transposase	Geobacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	552362	553700	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	557564	558317	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	566036	569282	DBSCAN-SWA		Clostridioides_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	572684	574370	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	588350	590267	DBSCAN-SWA		Bacillus_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	605023	608123	DBSCAN-SWA		Streptococcus_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	617138	617879	DBSCAN-SWA	holin	Clostridium_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	626833	627394	DBSCAN-SWA		Lactobacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	631205	636427	DBSCAN-SWA		Staphylococcus_phage(25.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	655509	658299	DBSCAN-SWA		Ostreococcus_tauri_virus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	675543	676563	DBSCAN-SWA	tRNA	Tupanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	681104	695951	DBSCAN-SWA	tRNA	Phage_TP(25.0%)	9	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	710533	711919	DBSCAN-SWA		Erysipelothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	738152	748300	DBSCAN-SWA		Pseudomonas_phage(25.0%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	754568	760752	DBSCAN-SWA		Tetraselmis_virus(66.67%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	767335	768454	DBSCAN-SWA	transposase	Geobacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	771879	772644	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	787570	789121	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	793175	798739	DBSCAN-SWA		Streptococcus_phage(33.33%)	7	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	823528	826224	DBSCAN-SWA		Bacillus_phage(33.33%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	834369	835479	DBSCAN-SWA		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	841526	848955	DBSCAN-SWA	protease	Clostridioides_phage(66.67%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	859953	860979	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	869685	870546	DBSCAN-SWA		Tupanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	875310	882608	DBSCAN-SWA		Indivirus(66.67%)	7	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	886619	889532	DBSCAN-SWA	transposase	Geobacillus_virus(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	901467	904010	DBSCAN-SWA		Cyanophage(33.33%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	908843	909962	DBSCAN-SWA	transposase	Geobacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	915045	916182	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	927823	928270	DBSCAN-SWA		Clostridioides_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	935913	947166	DBSCAN-SWA		Bacillus_virus(50.0%)	7	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	951567	954258	DBSCAN-SWA		Bacillus_phage(66.67%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	962440	963928	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	967338	970965	DBSCAN-SWA		Bacillus_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	976837	977881	DBSCAN-SWA		Mycoplasma_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	983544	984801	DBSCAN-SWA		Catovirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	988080	990257	DBSCAN-SWA		Catovirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	995787	997806	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1009079	1017678	DBSCAN-SWA		Bacillus_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1024785	1025658	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1035317	1036693	DBSCAN-SWA		Clostridium_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1052624	1053530	DBSCAN-SWA		Lactobacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1057223	1058924	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1063557	1070082	DBSCAN-SWA		Clostridioides_phage(25.0%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1077094	1078213	DBSCAN-SWA	transposase	Geobacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1081666	1088658	DBSCAN-SWA		Bacillus_phage(66.67%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1092188	1093463	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1123958	1124525	DBSCAN-SWA	integrase	Bacillus_phage(100.0%)	1	1122314:1122328	1126177:1126191
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1130331	1131723	DBSCAN-SWA		Tupanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1140554	1144793	DBSCAN-SWA		Trichoplusia_ni_ascovirus(33.33%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1160012	1162325	DBSCAN-SWA		Bodo_saltans_virus(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1170859	1171684	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1177953	1193937	DBSCAN-SWA	transposase,integrase	Paenibacillus_phage(25.0%)	14	1177148:1177164	1186581:1186597
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1198875	1199259	DBSCAN-SWA		Clostridioides_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1204056	1205158	DBSCAN-SWA		Clostridium_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1209319	1210030	DBSCAN-SWA		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1226199	1229224	DBSCAN-SWA		Clostridioides_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1233704	1234640	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1239937	1251864	DBSCAN-SWA	tRNA	Catovirus(20.0%)	9	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1259269	1260433	DBSCAN-SWA		Stx2-converting_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1263567	1354891	DBSCAN-SWA	plate,integrase,tail,tRNA,protease,portal	Clostridium_phage(38.24%)	87	1276710:1276728	1319858:1319876
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1366356	1367424	DBSCAN-SWA		Oenococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1380218	1388304	DBSCAN-SWA		Tupanvirus(66.67%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1391823	1393080	DBSCAN-SWA		Pseudomonas_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1397777	1398713	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1403299	1408083	DBSCAN-SWA	transposase	Bacillus_phage(66.67%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1413179	1413854	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1419970	1426093	DBSCAN-SWA		Bacillus_phage(33.33%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1433688	1447312	DBSCAN-SWA		Pandoravirus(22.22%)	15	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1454506	1456508	DBSCAN-SWA		Bacillus_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1460725	1463767	DBSCAN-SWA		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1467031	1470643	DBSCAN-SWA		Bacillus_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1478156	1478888	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1483715	1490823	DBSCAN-SWA	transposase	Geobacillus_virus(33.33%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1496142	1497027	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1500294	1501170	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1510426	1511254	DBSCAN-SWA		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1530544	1531219	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1534557	1535325	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1545715	1546462	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1554103	1554280	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1560157	1560826	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1571497	1628674	DBSCAN-SWA	plate,capsid,terminase,integrase,tail,portal,holin	Clostridium_phage(77.19%)	68	1563427:1563442	1574771:1574786
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1636672	1645870	DBSCAN-SWA		Bacillus_phage(50.0%)	7	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1654986	1656483	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1661693	1665541	DBSCAN-SWA		Streptococcus_phage(100.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1673266	1676191	DBSCAN-SWA		Brazilian_cedratvirus(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1683177	1683972	DBSCAN-SWA		Brazilian_cedratvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1688804	1689530	DBSCAN-SWA		Staphylococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1696886	1714056	DBSCAN-SWA		Bacillus_phage(25.0%)	14	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1724508	1727160	DBSCAN-SWA		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1737258	1743970	DBSCAN-SWA		Prochlorococcus_phage(66.67%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1750471	1751023	DBSCAN-SWA		Thermoanaerobacterium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1758108	1762019	DBSCAN-SWA		Anomala_cuprea_entomopoxvirus(33.33%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1773987	1777243	DBSCAN-SWA		Bacillus_phage(33.33%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1782298	1788809	DBSCAN-SWA		Staphylococcus_phage(60.0%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1835725	1842589	DBSCAN-SWA	protease	Clostridium_phage(25.0%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1859353	1866215	DBSCAN-SWA		Tupanvirus(25.0%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1871897	1873331	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1879660	1880635	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1888006	1893520	DBSCAN-SWA		Pseudomonas_phage(25.0%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1901511	1903079	DBSCAN-SWA		Clostridium_virus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1913691	1916349	DBSCAN-SWA		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1919764	1931420	DBSCAN-SWA	protease	Micromonas_pusilla_virus(25.0%)	9	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1936661	1940099	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1948822	1949557	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1952759	1958959	DBSCAN-SWA		Clostridium_phage(50.0%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1981307	1989540	DBSCAN-SWA	integrase	Bacillus_virus(25.0%)	9	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	1999402	2005563	DBSCAN-SWA		Planktothrix_phage(33.33%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2011500	2012187	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2016004	2017783	DBSCAN-SWA		Bacillus_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2033704	2039423	DBSCAN-SWA		Wolbachia_phage(33.33%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2043831	2044950	DBSCAN-SWA	transposase	Geobacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2049721	2051158	DBSCAN-SWA		Clostridioides_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2056320	2057388	DBSCAN-SWA	integrase	Lactococcus_phage(50.0%)	3	2049069:2049085	2057722:2057738
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2066757	2067696	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2071367	2072545	DBSCAN-SWA		Clostridium_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2076008	2081258	DBSCAN-SWA		Cronobacter_phage(50.0%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2087164	2088352	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2098146	2098431	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2112455	2114120	DBSCAN-SWA	tRNA	Escherichia_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2117222	2127356	DBSCAN-SWA	transposase,integrase	Clostridioides_phage(60.0%)	10	2114204:2114220	2136355:2136371
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2149577	2150048	DBSCAN-SWA		Acinetobacter_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2157541	2161820	DBSCAN-SWA		Acidithiobacillus_phage(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2164824	2165274	DBSCAN-SWA		Acinetobacter_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2171002	2174597	DBSCAN-SWA		Staphylococcus_phage(33.33%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2177982	2178657	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2181866	2189101	DBSCAN-SWA		Bacillus_phage(25.0%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2206741	2206945	DBSCAN-SWA		Erysipelothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2211377	2212112	DBSCAN-SWA		Flavobacterium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2215628	2226845	DBSCAN-SWA		Erythrobacter_phage(20.0%)	9	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2235158	2236478	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2242832	2246098	DBSCAN-SWA		Clostridium_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2251734	2252484	DBSCAN-SWA		Indivirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2257962	2267246	DBSCAN-SWA		Escherichia_phage(25.0%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2271583	2272477	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2279436	2280879	DBSCAN-SWA		Clostridioides_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2288463	2289567	DBSCAN-SWA		Pacmanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2301097	2307594	DBSCAN-SWA		Bacillus_phage(66.67%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2310660	2311293	DBSCAN-SWA		Brazilian_cedratvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2322560	2323364	DBSCAN-SWA		Vibrio_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2331179	2338605	DBSCAN-SWA	tRNA	Moumouvirus(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2344636	2346019	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2353043	2356481	DBSCAN-SWA		Acinetobacter_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2372196	2374317	DBSCAN-SWA		Indivirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2377988	2379047	DBSCAN-SWA		Tupanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2386212	2386581	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2390825	2395243	DBSCAN-SWA		Bacillus_phage(66.67%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2398267	2415972	DBSCAN-SWA	transposase	Paenibacillus_phage(20.0%)	19	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2421893	2422544	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2429375	2430875	DBSCAN-SWA		Klosneuvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2452808	2453756	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2458565	2459318	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2488270	2488648	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2492074	2492452	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2496066	2496573	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2499765	2517657	DBSCAN-SWA	tRNA,transposase,coat	Escherichia_phage(14.29%)	15	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2550576	2551692	DBSCAN-SWA		Pseudomonas_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2554799	2555243	DBSCAN-SWA		Xanthomonas_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2559472	2561881	DBSCAN-SWA		Clostridioides_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2566238	2574855	DBSCAN-SWA		Mycoplasma_phage(25.0%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2579611	2582905	DBSCAN-SWA	tRNA	unidentified_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2592883	2600841	DBSCAN-SWA	tRNA	Clostridium_botulinum_C_phage(25.0%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2607652	2612379	DBSCAN-SWA		Hokovirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2620722	2624523	DBSCAN-SWA		Faustovirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2641257	2645761	DBSCAN-SWA	tRNA	Staphylococcus_phage(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2654784	2656895	DBSCAN-SWA		Planktothrix_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2666459	2667878	DBSCAN-SWA		Pseudomonas_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2683082	2683580	DBSCAN-SWA		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2698234	2701259	DBSCAN-SWA		Bacillus_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2706297	2708313	DBSCAN-SWA		Bodo_saltans_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2713059	2719316	DBSCAN-SWA	tRNA	Prochlorococcus_phage(25.0%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2724667	2727830	DBSCAN-SWA		Streptococcus_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2734514	2741799	DBSCAN-SWA		Clostridioides_phage(75.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2747625	2755945	DBSCAN-SWA	transposase,tRNA	Streptococcus_phage(33.33%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2779508	2784729	DBSCAN-SWA		Bacillus_phage(75.0%)	7	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2802964	2805531	DBSCAN-SWA		Bacillus_virus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2816783	2818733	DBSCAN-SWA		Bacillus_virus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2829144	2830071	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2839145	2842287	DBSCAN-SWA		Bacillus_virus(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2845540	2846542	DBSCAN-SWA		Heterosigma_akashiwo_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2857399	2858743	DBSCAN-SWA		Moraxella_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2872309	2874217	DBSCAN-SWA		Tupanvirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2894311	2895556	DBSCAN-SWA		Heliothis_zea_nudivirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2906766	2911065	DBSCAN-SWA	tRNA	Acanthocystis_turfacea_Chlorella_virus(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2915140	2925336	DBSCAN-SWA		Bacillus_phage(40.0%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2932894	2941367	DBSCAN-SWA		Paramecium_bursaria_Chlorella_virus(25.0%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	2945227	3062307	DBSCAN-SWA	tRNA,transposase,protease,integrase	Streptococcus_phage(42.0%)	99	2987567:2987586	3075105:3075124
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3068113	3072316	DBSCAN-SWA		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3079467	3084472	DBSCAN-SWA	tRNA	uncultured_Mediterranean_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3094305	3095820	DBSCAN-SWA		Tupanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3112410	3115369	DBSCAN-SWA		Planktothrix_phage(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3128525	3129308	DBSCAN-SWA		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3140254	3144202	DBSCAN-SWA		Bacillus_virus(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3184063	3184810	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3189024	3199435	DBSCAN-SWA	transposase	Bacillus_virus(20.0%)	10	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3212354	3213743	DBSCAN-SWA		Erysipelothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3234010	3234610	DBSCAN-SWA		Tetraselmis_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3240937	3241255	DBSCAN-SWA		Streptomyces_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3247350	3249894	DBSCAN-SWA		Bacillus_phage(100.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3267139	3267892	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3289899	3297108	DBSCAN-SWA		Leptospira_phage(50.0%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3308918	3310073	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3326225	3327659	DBSCAN-SWA		Pandoravirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3340235	3340877	DBSCAN-SWA		Synechococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3347363	3348482	DBSCAN-SWA	transposase	Geobacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3354759	3356214	DBSCAN-SWA		Pandoravirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3360222	3365633	DBSCAN-SWA		Cryptophlebia_leucotreta_granulosis_virus(33.33%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3380966	3381638	DBSCAN-SWA		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3394565	3395558	DBSCAN-SWA		Mycoplasma_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3400556	3401519	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3411121	3413245	DBSCAN-SWA	transposase,integrase	Paenibacillus_phage(66.67%)	3	3406494:3406510	3418796:3418812
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3418512	3437353	DBSCAN-SWA	integrase	Clostridium_botulinum_C_phage(33.33%)	21	3417077:3417093	3438926:3438942
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3442407	3447530	DBSCAN-SWA		Anomala_cuprea_entomopoxvirus(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3453335	3454628	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3463333	3470216	DBSCAN-SWA		Acinetobacter_phage(50.0%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3486118	3486868	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3491414	3507475	DBSCAN-SWA		Clostridium_phage(14.29%)	14	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3515001	3519968	DBSCAN-SWA		Bacillus_virus(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3536917	3537457	DBSCAN-SWA		uncultured_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3542256	3542892	DBSCAN-SWA		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3555107	3556366	DBSCAN-SWA		Tupanvirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3561976	3565778	DBSCAN-SWA	tRNA	Clostridioides_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3570522	3571287	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3574666	3581424	DBSCAN-SWA		Bacillus_phage(80.0%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3585263	3585929	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3596505	3602340	DBSCAN-SWA		Streptococcus_phage(33.33%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3619545	3625040	DBSCAN-SWA	protease	Moraxella_phage(33.33%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3628647	3630672	DBSCAN-SWA		Ralstonia_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3641123	3656974	DBSCAN-SWA		Clostridium_phage(25.0%)	16	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3662994	3665518	DBSCAN-SWA		Klosneuvirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3669268	3670264	DBSCAN-SWA		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3677204	3685772	DBSCAN-SWA		Bacillus_phage(50.0%)	8	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3695522	3708001	DBSCAN-SWA		Erysipelothrix_phage(25.0%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3714339	3714729	DBSCAN-SWA		Streptococcus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3718855	3721898	DBSCAN-SWA		Bacillus_virus(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3725052	3731343	DBSCAN-SWA		Streptococcus_phage(66.67%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3741376	3743173	DBSCAN-SWA		Phaeocystis_pouchetii_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3746391	3749217	DBSCAN-SWA		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3755809	3756880	DBSCAN-SWA		Bacillus_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3804478	3818310	DBSCAN-SWA	transposase	Clostridioides_phage(81.82%)	16	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3823305	3825135	DBSCAN-SWA		Lactobacillus_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3834174	3838593	DBSCAN-SWA		Bacillus_phage(33.33%)	6	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3844899	3845865	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3853170	3853449	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3856825	3861901	DBSCAN-SWA		Paenibacillus_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3875187	3877612	DBSCAN-SWA		Hokovirus(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3891692	3896319	DBSCAN-SWA		Planktothrix_phage(33.33%)	5	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3900446	3912904	DBSCAN-SWA	tRNA	Bacillus_virus(40.0%)	13	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3918676	3920206	DBSCAN-SWA	tRNA	Tupanvirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3925728	3927699	DBSCAN-SWA	protease	Ostreococcus_tauri_virus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3930756	3931242	DBSCAN-SWA		Bacillus_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3944816	3945386	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3952062	3954494	DBSCAN-SWA		Planktothrix_phage(33.33%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3958392	3959442	DBSCAN-SWA		Halovirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3962958	3964002	DBSCAN-SWA		Halovirus(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3972531	3976105	DBSCAN-SWA	tRNA	Bacillus_phage(66.67%)	4	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3981667	3982396	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	3990035	4008136	DBSCAN-SWA		Streptococcus_phage(85.71%)	22	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4011857	4016768	DBSCAN-SWA	transposase,integrase	Streptococcus_phage(50.0%)	4	4009616:4009629	4021178:4021191
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4022968	4023586	DBSCAN-SWA		Planktothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4027824	4028424	DBSCAN-SWA		Acinetobacter_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4049341	4058153	DBSCAN-SWA		Paenibacillus_phage(20.0%)	7	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4062299	4062734	DBSCAN-SWA		Clostridium_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4070105	4071799	DBSCAN-SWA		Natrialba_phage(50.0%)	2	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4077503	4089634	DBSCAN-SWA		Bacillus_virus(33.33%)	14	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4102107	4106262	DBSCAN-SWA	tRNA	uncultured_Mediterranean_phage(50.0%)	3	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4127093	4129541	DBSCAN-SWA	protease	Escherichia_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4145842	4147573	DBSCAN-SWA		Erysipelothrix_phage(100.0%)	1	NA	NA
GCF_002812585.1_ASM281258v1	NZ_CP025044	Clostridioides difficile strain R0104a chromosome, complete genome	4190038	4159330	4188966	DBSCAN-SWA	tRNA	Bacillus_phage(18.18%)	27	NA	NA
