assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002812525.1_ASM281252v1	NZ_CP025043	Streptococcus suis strain AH681 chromosome, complete genome	1	736056-736175	1	CRISPRCasFinder	no		cas3,csa3,DinG,RT,WYL,DEDDh	Orphan	GTATACTGTTATAAAAAACAAACTGGAGGATTT	33	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,RT,WYL,DEDDh	NA|174aa|up_5|NZ_CP025043.1_730731_731253_+,NA|140aa|up_4|NZ_CP025043.1_731206_731626_+,NA|263aa|up_3|NZ_CP025043.1_731622_732411_+,NA|62aa|down_0|NZ_CP025043.1_736179_736365_+	NA|500aa|up_9|NZ_CP025043.1_725580_727080_+	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|284aa|up_8|NZ_CP025043.1_727066_727918_+	pfam04991, LicD, LicD family	NA|515aa|up_7|NZ_CP025043.1_727931_729476_+	cd05151, ChoK-like, Choline Kinase and similar proteins	NA|352aa|up_6|NZ_CP025043.1_729568_730624_+	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|174aa|up_5|NZ_CP025043.1_730731_731253_+	NA	NA|140aa|up_4|NZ_CP025043.1_731206_731626_+	NA	NA|263aa|up_3|NZ_CP025043.1_731622_732411_+	NA	NA|497aa|up_2|NZ_CP025043.1_732494_733985_+	PRK15057, PRK15057, UDP-glucose 6-dehydrogenase; Provisional	NA|307aa|up_1|NZ_CP025043.1_734034_734955_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|230aa|up_0|NZ_CP025043.1_734966_735656_+	COG4750, LicC, CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes [Cell envelope biogenesis, outer membrane]	NA|62aa|down_0|NZ_CP025043.1_736179_736365_+	NA	NA|69aa|down_1|NZ_CP025043.1_736747_736954_+	pfam13007, LZ_Tnp_IS66, Transposase C of IS166 homeodomain	NA|451aa|down_2|NZ_CP025043.1_736907_738260_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|311aa|down_3|NZ_CP025043.1_738652_739585_+	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|371aa|down_4|NZ_CP025043.1_739603_740716_+	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]	NA|182aa|down_5|NZ_CP025043.1_740760_741306_-	COG0431, COG0431, Predicted flavoprotein [General function prediction only]	NA|150aa|down_6|NZ_CP025043.1_741368_741818_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|166aa|down_7|NZ_CP025043.1_742031_742529_+	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown]	NA|394aa|down_8|NZ_CP025043.1_742525_743707_+	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|449aa|down_9|NZ_CP025043.1_743721_745068_+	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated
GCF_002812525.1_ASM281252v1	NZ_CP025043	Streptococcus suis strain AH681 chromosome, complete genome	2	878633-878714	2	CRISPRCasFinder	no		cas3,csa3,DinG,RT,WYL,DEDDh	Orphan	AACTTCGTTCGCTTTATTTCCAACCCCC	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,RT,WYL,DEDDh	NA|135aa|up_5|NZ_CP025043.1_872255_872660_+,NA|123aa|up_0|NZ_CP025043.1_877746_878115_+,NA	NA|334aa|up_9|NZ_CP025043.1_869032_870034_+	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|289aa|up_8|NZ_CP025043.1_870055_870922_+	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|253aa|up_7|NZ_CP025043.1_870918_871677_+	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|162aa|up_6|NZ_CP025043.1_871764_872250_+	cd04335, PrdX_deacylase, This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences	NA|135aa|up_5|NZ_CP025043.1_872255_872660_+	NA	NA|388aa|up_4|NZ_CP025043.1_872956_874120_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|554aa|up_3|NZ_CP025043.1_874476_876138_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|259aa|up_2|NZ_CP025043.1_876198_876975_+	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|232aa|up_1|NZ_CP025043.1_877040_877736_+	COG5549, COG5549, Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones]	NA|123aa|up_0|NZ_CP025043.1_877746_878115_+	NA	NA|91aa|down_0|NZ_CP025043.1_878967_879240_-	pfam04531, Phage_holin_1, Bacteriophage holin	NA|299aa|down_1|NZ_CP025043.1_879318_880215_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|291aa|down_2|NZ_CP025043.1_880214_881087_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|300aa|down_3|NZ_CP025043.1_881076_881976_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|333aa|down_4|NZ_CP025043.1_881989_882988_-	PRK09814, PRK09814, sugar transferase	NA|773aa|down_5|NZ_CP025043.1_883068_885387_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|544aa|down_6|NZ_CP025043.1_885449_887081_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|560aa|down_7|NZ_CP025043.1_887090_888770_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|830aa|down_8|NZ_CP025043.1_889599_892089_-	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family	NA|296aa|down_9|NZ_CP025043.1_892124_893012_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2
GCF_002812525.1_ASM281252v1	NZ_CP025043	Streptococcus suis strain AH681 chromosome, complete genome	3	957364-957441	3	CRISPRCasFinder	no		cas3,csa3,DinG,RT,WYL,DEDDh	Orphan	TCAAACTGTCTCCCAGACAGTTT	23	1	1	957387-957418	NZ_CP025043.1_172905-172936	NA	1	1	Orphan	cas3,csa3,DinG,RT,WYL,DEDDh	NA,NA	NA|1121aa|up_9|NZ_CP025043.1_941925_945288_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|490aa|up_8|NZ_CP025043.1_945502_946972_+	pfam14253, AbiH, Bacteriophage abortive infection AbiH	NA|392aa|up_7|NZ_CP025043.1_947044_948220_+	cd17522, RMtype1_S_MjaORF1531P-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Methanocaldococcus jannaschii DSM 2661 S subunit (S	NA|532aa|up_6|NZ_CP025043.1_948944_950540_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|225aa|up_5|NZ_CP025043.1_950618_951293_+	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|404aa|up_4|NZ_CP025043.1_951620_952832_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|119aa|up_3|NZ_CP025043.1_952831_953188_+	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|270aa|up_2|NZ_CP025043.1_953199_954009_+	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional	NA|238aa|up_1|NZ_CP025043.1_954041_954755_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|756aa|up_0|NZ_CP025043.1_954894_957162_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|4461aa|down_0|NZ_CP025043.1_958048_971431_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|379aa|down_1|NZ_CP025043.1_971625_972762_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|247aa|down_2|NZ_CP025043.1_972777_973518_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|302aa|down_3|NZ_CP025043.1_974105_975011_+	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	NA|2033aa|down_4|NZ_CP025043.1_975065_981164_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|374aa|down_5|NZ_CP025043.1_981381_982503_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|206aa|down_6|NZ_CP025043.1_983138_983756_+	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|258aa|down_7|NZ_CP025043.1_983765_984539_+	TIGR01457, HAD-SF-IIA-hyp2, HAD-superfamily subfamily IIA hydrolase, TIGR01457	NA|210aa|down_8|NZ_CP025043.1_984528_985158_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|59aa|down_9|NZ_CP025043.1_985236_985413_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed
GCF_002812525.1_ASM281252v1	NZ_CP025043	Streptococcus suis strain AH681 chromosome, complete genome	4	2162949-2163101	4	CRISPRCasFinder	no		cas3,csa3,DinG,RT,WYL,DEDDh	Orphan	CAAAGCGAGTCAACGAAGTAATAAAAGAAAAACTAAATGACGATATA	47	1	2	2162996-2163054|2162996-2163054	NZ_CP025043.1_2059148-2059206|NZ_CP025043.1_2323379-2323437	NA	1	1	Orphan	cas3,csa3,DinG,RT,WYL,DEDDh	NA,NA|209aa|down_7|NZ_CP025043.1_2179778_2180405_+	NA|108aa|up_9|NZ_CP025043.1_2148829_2149153_-	PRK06531, yajC, preprotein translocase subunit YajC; Validated	NA|431aa|up_8|NZ_CP025043.1_2149262_2150555_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|744aa|up_7|NZ_CP025043.1_2150918_2153150_+	PRK02471, PRK02471, bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA|1040aa|up_6|NZ_CP025043.1_2153684_2156804_+	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|289aa|up_5|NZ_CP025043.1_2156883_2157750_+	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|335aa|up_4|NZ_CP025043.1_2157742_2158747_+	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|163aa|up_3|NZ_CP025043.1_2158836_2159325_-	cd02167, NMNAT_NadR, Nicotinamide/nicotinate mononucleotide adenylyltransferase of bifunctional NadR-like proteins	NA|283aa|up_2|NZ_CP025043.1_2160104_2160953_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|288aa|up_1|NZ_CP025043.1_2160952_2161816_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|304aa|up_0|NZ_CP025043.1_2161793_2162705_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|285aa|down_0|NZ_CP025043.1_2163242_2164097_-	pfam17802, SpaA, Prealbumin-like fold domain	NA|639aa|down_1|NZ_CP025043.1_2164120_2166037_-	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|344aa|down_2|NZ_CP025043.1_2166077_2167109_-	pfam17802, SpaA, Prealbumin-like fold domain	NA|166aa|down_3|NZ_CP025043.1_2175752_2176250_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|817aa|down_4|NZ_CP025043.1_2176258_2178709_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|153aa|down_5|NZ_CP025043.1_2178712_2179171_-	COG4463, CtsR, Transcriptional repressor of class III stress genes [Transcription]	NA|113aa|down_6|NZ_CP025043.1_2179440_2179779_+	TIGR01295, Pediocin_PA-1_biosynthesis_protein_PedC, bacteriocin transport accessory protein, putative	NA|209aa|down_7|NZ_CP025043.1_2179778_2180405_+	NA	NA|347aa|down_8|NZ_CP025043.1_2180957_2181998_-	PRK09377, tsf, elongation factor Ts; Provisional	NA|259aa|down_9|NZ_CP025043.1_2182265_2183042_-	PRK05299, rpsB, 30S ribosomal protein S2; Provisional
