The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019489	Bartonella sp. 1-1C chromosome, complete genome	1600621	101988	111749	1600621	integrase	Iodobacteriophage(22.22%)	14	98372:98390	116900:116918
98372:98390	attL	TAGCTCAGTTGGTAGAGCA	NA	NA	NA	NA
WP_100692856.1|101988_102468_-	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	63.4	1.4e-47
WP_035006123.1|102457_102790_-	hypothetical protein	NA	F8TV45	EBPR_siphovirus	51.5	7.7e-24
WP_148664920.1|104040_104334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100692858.1|104411_104726_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_100692860.1|104964_105345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100692861.1|105402_106143_+	phage regulatory protein/antirepressor Ant	NA	B5AX29	Iodobacteriophage	37.9	7.0e-25
WP_100692862.1|106225_107017_+	phage recombination protein Bet	NA	A0A0M3LR26	Mannheimia_phage	39.7	9.7e-41
WP_100692863.1|107018_107642_+	exonuclease	NA	A0A0U2BXF3	Paracoccus_phage	45.9	3.5e-46
WP_100692864.1|107758_107977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693915.1|107984_109028_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A291AUF0	Sinorhizobium_phage	29.3	1.2e-30
WP_100692865.1|109227_109431_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_100692866.1|109509_110133_-	exonuclease	NA	A0A0U2BXF3	Paracoccus_phage	45.9	1.0e-45
WP_100692867.1|110134_110926_-	phage recombination protein Bet	NA	A0A0M3LR26	Mannheimia_phage	39.7	7.4e-41
WP_100692861.1|111008_111749_-	phage regulatory protein/antirepressor Ant	NA	B5AX29	Iodobacteriophage	37.9	7.0e-25
116900:116918	attR	TGCTCTACCAACTGAGCTA	NA	NA	NA	NA
>prophage 2
NZ_CP019489	Bartonella sp. 1-1C chromosome, complete genome	1600621	377376	445433	1600621	tRNA,capsid,tail,terminase,integrase,portal,protease,head,plate	Acidithiobacillus_phage(19.51%)	83	382102:382118	447906:447922
WP_100693019.1|377376_378507_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_100693020.1|378509_379433_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_100693021.1|379562_381044_+	Do family serine endopeptidase	NA	A0A1B1IT49	uncultured_Mediterranean_phage	28.4	8.5e-22
WP_100693022.1|381118_381994_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
382102:382118	attL	AATATTTTATTTTAGTT	NA	NA	NA	NA
WP_100693023.1|382269_383391_+	AAA family ATPase	NA	A0A291LA07	Bordetella_phage	52.9	7.4e-103
WP_100693024.1|383470_384205_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_100693025.1|384702_385119_+	hypothetical protein	NA	Q94M22	Bartonella_quintana_phage	36.0	1.9e-11
WP_158521540.1|385175_385514_+	porin family protein	NA	O11861	Bartonella_henselae_phage	45.8	6.4e-18
WP_148664923.1|386935_388561_+	BID domain-containing T4SS effector	NA	NA	NA	NA	NA
WP_100693029.1|389816_390011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693030.1|390677_391589_+	YopJ family type III secretion system effector serine/threonine acetyltransferase	NA	NA	NA	NA	NA
WP_100693928.1|392913_394077_+|integrase	site-specific integrase	integrase	A0A1X9HVL9	Ruegeria_phage	40.0	2.9e-73
WP_100693031.1|394123_396190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693032.1|396580_396856_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_100693929.1|396868_397150_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_100693034.1|397351_397579_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693035.1|397575_398238_-	glycoside hydrolase family protein	NA	A0A141GEY9	Brucella_phage	64.9	9.6e-50
WP_100693036.1|398538_399447_+	type II restriction endonuclease	NA	NA	NA	NA	NA
WP_100693037.1|399448_400372_+	DNA cytosine methyltransferase	NA	Q6DMX0	Streptococcus_phage	63.4	3.1e-107
WP_100693038.1|400383_401691_-	late control protein	NA	K4HZC6	Acidithiobacillus_phage	37.9	2.4e-68
WP_100693039.1|401687_401912_-|tail	phage tail protein	tail	E5FFI3	Burkholderia_phage	42.1	9.2e-05
WP_100693040.1|401908_402289_-|tail	phage tail protein	tail	D5LGY3	Escherichia_phage	42.3	9.8e-23
WP_100693041.1|402294_404178_-|tail	phage tail tape measure protein	tail	A0A0E3U2N9	Fusobacterium_phage	25.9	3.5e-12
WP_100693930.1|404174_404291_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_100693042.1|404287_404572_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_100693043.1|404573_405080_-|tail	phage major tail tube protein	tail	K4I1G5	Acidithiobacillus_phage	40.4	2.4e-29
WP_100693044.1|405079_406315_-|tail	phage tail protein	tail	A0A088FVH5	Escherichia_phage	52.4	9.3e-131
WP_100693045.1|406705_407443_+	phage antirepressor Ant	NA	Q7Y5W2	Haemophilus_phage	42.4	1.6e-50
WP_100693046.1|407439_407718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693047.1|407888_408140_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_100693048.1|408132_408519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693049.1|408528_408825_-	HigA family addiction module antidote protein	NA	NA	NA	NA	NA
WP_100693050.1|409071_409314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693051.1|409325_410435_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693052.1|410448_413592_-	DUF4815 domain-containing protein	NA	K4ICQ5	Acidithiobacillus_phage	34.7	3.7e-152
WP_100693053.1|413593_414700_-|tail	phage tail protein	tail	K4I1F8	Acidithiobacillus_phage	34.2	9.5e-18
WP_100693054.1|414699_415527_-|plate	baseplate assembly protein	plate	A0A219VH98	Ochrobactrum_phage	34.2	9.5e-39
WP_100693055.1|415523_415865_-|plate	baseplate assembly protein W	plate	Q75QM0	Wolbachia_phage	59.6	6.7e-31
WP_100693056.1|415861_416551_-|plate	phage baseplate assembly protein V	plate	V5YUM9	Pseudomonas_phage	37.7	3.1e-19
WP_100693057.1|416543_417068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693058.1|417144_417444_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693059.1|417430_417703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693060.1|417739_418057_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0K2CZV4	Paenibacillus_phage	40.6	2.2e-07
WP_100693061.1|418099_418246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693062.1|418288_418567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693063.1|418563_419295_-	phage antirepressor Ant	NA	Q7Y5W2	Haemophilus_phage	40.2	4.9e-47
WP_100693064.1|419588_420122_-	phage antirepressor Ant	NA	A0A0P0ZDY7	Stx2-converting_phage	45.5	1.0e-30
WP_100693065.1|420423_421011_-	phage regulatory protein/antirepressor Ant	NA	B5AX29	Iodobacteriophage	42.4	3.3e-25
WP_100693066.1|421414_422311_-	hypothetical protein	NA	A0A076G7L7	Bacillus_phage	50.0	5.5e-08
WP_100693067.1|422341_422692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693068.1|422693_423770_-|capsid	major capsid protein	capsid	A0A0A8ILA9	Aurantimonas_phage	34.9	9.4e-55
WP_100693069.1|423782_424151_-|head	head decoration protein	head	A0A0A8IL52	Aurantimonas_phage	48.9	3.0e-13
WP_100693932.1|424147_424414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693931.1|424410_425475_-	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	48.1	5.3e-66
WP_100693070.1|425464_427003_-|portal	phage portal protein	portal	K4I1F2	Acidithiobacillus_phage	41.2	2.4e-96
WP_100693071.1|427002_427251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693072.1|427254_429183_-|terminase	phage terminase large subunit family protein	terminase	K4I3Y9	Acidithiobacillus_phage	52.4	1.6e-166
WP_100693073.1|429213_429765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693074.1|429858_430068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693075.1|430140_430419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693076.1|430415_431147_-	phage antirepressor Ant	NA	Q7Y5W2	Haemophilus_phage	41.1	4.2e-46
WP_100693077.1|432544_433126_-	hypothetical protein	NA	A0A0A8IL87	Aurantimonas_phage	33.1	2.9e-10
WP_100693078.1|433122_433470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693079.1|434021_434444_+	HicB family protein	NA	A0A2H4JFV9	uncultured_Caudovirales_phage	35.0	4.4e-16
WP_100693080.1|434447_434996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693081.1|435006_435453_-	single-stranded DNA-binding protein	NA	A0A1B1IVU7	uncultured_Mediterranean_phage	45.9	3.7e-29
WP_100693082.1|435647_435947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693083.1|435924_436230_+	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	38.6	9.6e-05
WP_100693084.1|436360_436552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693085.1|436612_437041_+	type II toxin-antitoxin system HicB family antitoxin	NA	F1C593	Cronobacter_phage	36.7	1.8e-12
WP_100693086.1|437037_437472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693914.1|437634_437997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693087.1|438031_439219_-	DUF1376 domain-containing protein	NA	NA	NA	NA	NA
WP_100693088.1|439208_439688_-	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	63.4	2.5e-47
WP_035006123.1|439677_440010_-	hypothetical protein	NA	F8TV45	EBPR_siphovirus	51.5	7.7e-24
WP_100693089.1|440142_440919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100692871.1|440920_441358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693090.1|441347_441551_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693933.1|441927_442545_+	transcriptional regulator	NA	K7PH71	Enterobacterial_phage	27.7	7.9e-06
WP_100693091.1|442755_443136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693092.1|443193_443934_+	phage regulatory protein/antirepressor Ant	NA	B5AX29	Iodobacteriophage	38.9	2.7e-24
WP_100692867.1|444016_444808_+	phage recombination protein Bet	NA	A0A0M3LR26	Mannheimia_phage	39.7	7.4e-41
WP_100693093.1|444809_445433_+	exonuclease	NA	A0A0U2BXF3	Paracoccus_phage	45.9	6.1e-46
447906:447922	attR	AATATTTTATTTTAGTT	NA	NA	NA	NA
>prophage 3
NZ_CP019489	Bartonella sp. 1-1C chromosome, complete genome	1600621	695689	702466	1600621	tRNA	Hokovirus(16.67%)	6	NA	NA
WP_100693282.1|695689_697231_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	38.9	1.4e-96
WP_100693283.1|697294_698350_-	DNA polymerase III subunit delta'	NA	S5WKH4	Pseudomonas_phage	26.7	4.5e-09
WP_100693284.1|698346_698988_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	39.3	7.4e-31
WP_100693285.1|699030_700203_-	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	31.0	4.4e-05
WP_100693286.1|700303_701146_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	55.1	1.2e-20
WP_100693287.1|701818_702466_+	LemA family protein	NA	A0A1X9IGG1	Lactococcus_phage	31.6	1.7e-11
>prophage 4
NZ_CP019489	Bartonella sp. 1-1C chromosome, complete genome	1600621	771320	781160	1600621	tRNA	uncultured_Mediterranean_phage(71.43%)	7	NA	NA
WP_100693336.1|771320_772451_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	54.0	5.0e-99
WP_100693337.1|772867_773380_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	59.6	7.7e-47
WP_100693949.1|773384_773984_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	2.3e-42
WP_100693338.1|773986_774493_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	34.4	2.2e-22
WP_100693339.1|774526_777295_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.9	5.3e-102
WP_035006333.1|777534_778023_-	single-stranded DNA-binding protein	NA	A0A0K1LLZ9	Caulobacter_phage	60.7	8.1e-46
WP_100693340.1|778247_781160_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	61.6	0.0e+00
>prophage 5
NZ_CP019489	Bartonella sp. 1-1C chromosome, complete genome	1600621	1220014	1284445	1600621	holin,tRNA,capsid,tail,terminase,portal	Sinorhizobium_phage(13.33%)	54	NA	NA
WP_100693659.1|1220014_1221502_-|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L6G5	Tupanvirus	26.4	7.7e-31
WP_100693646.1|1222094_1223192_+	DUF3792 family protein	NA	NA	NA	NA	NA
WP_100693647.1|1230109_1230292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693660.1|1230566_1232555_+	M23 family metallopeptidase	NA	A0A2P1JY73	Gordonia_phage	40.3	1.3e-17
WP_100693661.1|1233111_1234530_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_100693662.1|1234751_1235306_-	RNA polymerase sigma factor	NA	A0A0F6TH34	Sinorhizobium_phage	38.0	3.6e-18
WP_100693663.1|1235302_1235518_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693664.1|1235680_1236475_+	response regulator	NA	NA	NA	NA	NA
WP_100693665.1|1236490_1237504_+	histidine kinase	NA	NA	NA	NA	NA
WP_100693666.1|1237759_1238053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693667.1|1238182_1238608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693668.1|1238670_1239378_-	DUF4167 domain-containing protein	NA	NA	NA	NA	NA
WP_100693669.1|1240129_1241047_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA	NA
WP_100693670.1|1241290_1241740_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693972.1|1242212_1242434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693671.1|1242460_1243123_-	glycoside hydrolase family protein	NA	A0A141GEY9	Brucella_phage	63.6	2.6e-47
WP_100693973.1|1243346_1243610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693672.1|1244147_1245137_-|tail	tail fiber protein	tail	D5LGZ0	Escherichia_phage	39.4	4.8e-21
WP_100693673.1|1245142_1246258_-|tail	tail fiber domain-containing protein	tail	NA	NA	NA	NA
WP_100693974.1|1246163_1246745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693674.1|1247137_1248601_-	hypothetical protein	NA	D6PEY0	uncultured_phage	27.0	4.6e-44
WP_100693675.1|1248601_1249318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693676.1|1249385_1250516_-|capsid	N4-gp56 family major capsid protein	capsid	I6NV37	Burkholderia_virus	33.2	9.6e-42
WP_100693677.1|1250642_1251512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693678.1|1251716_1253537_-|portal	phage portal protein	portal	A0A248SKZ2	Klebsiella_phage	23.7	3.5e-33
WP_100693679.1|1253536_1254865_-|terminase	PBSX family phage terminase large subunit	terminase	A0A088F6U9	Sulfitobacter_phage	56.7	2.8e-141
WP_100693975.1|1256473_1256818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693680.1|1257852_1260444_-	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	34.5	7.7e-119
WP_158521548.1|1260623_1260788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693976.1|1261111_1261291_-	DNA gyrase inhibitor YacG	NA	NA	NA	NA	NA
WP_100693681.1|1261410_1262061_-	septum formation protein Maf	NA	NA	NA	NA	NA
WP_013545481.1|1262272_1262491_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_100693682.1|1262975_1263485_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	38.1	8.2e-17
WP_100693683.1|1263571_1264687_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_004863016.1|1265478_1265604_+	50S ribosomal protein L36	NA	NA	NA	NA	NA
WP_100693684.1|1265603_1266464_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693685.1|1266758_1267367_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_100693977.1|1267385_1268249_+	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA	NA
WP_100693978.1|1268627_1269920_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_100693686.1|1270726_1271344_-	exonuclease	NA	Q9MC71	Pseudomonas_phage	45.4	2.4e-34
WP_100693687.1|1271556_1271748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693688.1|1271758_1272148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693689.1|1272453_1272774_-	helix-turn-helix transcriptional regulator	NA	A0A2L0V128	Agrobacterium_phage	53.6	1.3e-20
WP_100693690.1|1273231_1274491_+	YdaU family protein	NA	A0A076GD06	Sinorhizobium_phage	40.1	3.7e-18
WP_100693691.1|1276676_1277282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693692.1|1278119_1278728_+	DedA family protein	NA	NA	NA	NA	NA
WP_100693693.1|1278740_1279295_+	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_158521549.1|1279656_1279800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100693694.1|1280011_1280809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100693695.1|1281204_1281756_+	dUTP diphosphatase	NA	K4JSC8	Caulobacter_phage	51.6	3.3e-35
WP_100693696.1|1281944_1282421_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_100693697.1|1282401_1283226_-	biopolymer transporter ExbB	NA	NA	NA	NA	NA
WP_100693698.1|1283683_1284004_+	DUF883 family protein	NA	NA	NA	NA	NA
WP_100693699.1|1284007_1284445_+|holin	phage holin family protein	holin	NA	NA	NA	NA
