The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP024970	Erwinia amylovora strain E-2 chromosome, complete genome	3806898	340764	350732	3806898	holin,tail	Shigella_phage(20.0%)	13	NA	NA
WP_013035771.1|340764_341016_-	hypothetical protein	NA	A0A1W6JP35	Morganella_phage	62.8	4.8e-18
WP_004160478.1|341085_341835_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	63.2	3.6e-69
WP_004160476.1|341827_342190_+	antitermination protein	NA	U5P0A5	Shigella_phage	55.4	1.2e-30
WP_004160474.1|342231_342621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004160468.1|343680_344691_-	hypothetical protein	NA	A0A2H4JEI9	uncultured_Caudovirales_phage	28.7	3.5e-27
WP_004160466.1|344744_344969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004160463.1|345706_346120_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0D4DCG1	Acinetobacter_phage	36.3	2.3e-17
WP_071524100.1|346174_346357_-	type II toxin-antitoxin system HicA family toxin	NA	A0A0D4DC32	Acinetobacter_phage	55.9	6.3e-12
WP_004160460.1|346514_346913_+|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	66.4	4.0e-35
WP_004160458.1|347713_348004_+|tail	tail fiber assembly protein	tail	B6SCW7	Bacteriophage	63.6	4.1e-13
WP_004160456.1|348007_349450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004160455.1|349450_350374_-	glycosyltransferase family 2 protein	NA	M1FQW5	Enterobacteria_phage	81.4	1.0e-145
WP_013035778.1|350339_350732_-	GtrA family protein	NA	B9UDL8	Salmonella_phage	52.2	1.8e-27
>prophage 2
NZ_CP024970	Erwinia amylovora strain E-2 chromosome, complete genome	3806898	465326	528556	3806898	protease,tRNA,plate	Tupanvirus(20.0%)	57	NA	NA
WP_004160262.1|465326_467096_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_004160261.1|467059_468142_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_013035793.1|468167_468692_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_004160259.1|468696_471009_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_004160257.1|471010_471565_+	DUF4123 domain-containing protein	NA	A4PE24	Ralstonia_virus	38.4	2.4e-17
WP_013034907.1|471564_472347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013035794.1|472468_472885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004164822.1|472961_473504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160252.1|473548_474292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033477797.1|474317_474794_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_004160250.1|474825_475410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160249.1|475583_475973_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004164818.1|476234_477125_+	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
WP_004160237.1|477856_478309_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_004160233.1|478353_479754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160231.1|479698_480025_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160230.1|480083_480272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160227.1|480566_480959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160224.1|481924_483091_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_004160221.1|483976_484558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160219.1|484654_485710_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_004160217.1|485750_487016_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160215.1|487012_487927_+	ketopantoate reductase	NA	NA	NA	NA	NA
WP_004160213.1|487952_489272_-|tRNA	histidine--tRNA ligase	tRNA	A0A2K9L6G5	Tupanvirus	30.5	1.9e-33
WP_004160211.1|489408_490662_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_004160209.1|490658_491582_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_004160201.1|491643_493233_-	asparagine synthetase B	NA	R4TIC1	Phaeocystis_globosa_virus	28.7	4.2e-35
WP_013035800.1|493474_493879_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_099258368.1|494377_495514_+	MFS transporter	NA	NA	NA	NA	NA
WP_004164816.1|495951_496062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004160193.1|496514_497090_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_004160191.1|497127_498843_-	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_004160189.1|499047_500349_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_004160186.1|500586_502023_-	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_004160185.1|501982_502849_+	FxsA family protein	NA	NA	NA	NA	NA
WP_004160183.1|503067_503361_+	co-chaperone GroES	NA	A0A2C9CWL1	Yersinia_phage	43.8	1.3e-11
WP_004160181.1|503397_505044_+	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	67.4	4.6e-186
WP_004160179.1|505235_505580_+	DUF4156 domain-containing protein	NA	NA	NA	NA	NA
WP_004160178.1|505640_506669_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA	NA
WP_004160177.1|506710_507277_+	elongation factor P	NA	NA	NA	NA	NA
WP_071524097.1|507621_508056_+|protease	cysteine protease	protease	NA	NA	NA	NA
WP_004160172.1|508362_508494_+	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_004160171.1|508539_509070_-	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	51.5	8.8e-46
WP_004160169.1|509253_510231_+	elongation factor P--(R)-beta-lysine ligase	NA	A0A2K9KZX5	Tupanvirus	29.4	2.0e-27
WP_004160165.1|510326_513662_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA	NA
WP_004160162.1|513672_514572_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_004160160.1|514668_515730_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA	NA
WP_013035805.1|515821_516385_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	42.0	9.4e-30
WP_004160147.1|517804_519325_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_004160145.1|519321_519798_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_004160143.1|519797_521453_+	N-acetylmuramoyl-L-alanine amidase AmiB	NA	A0A067ZJB6	Vibrio_phage	29.7	3.0e-15
WP_004160136.1|521467_523309_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.4	7.0e-58
WP_004160135.1|523301_524252_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_004160134.1|524354_524666_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_004160133.1|524896_526177_+	GTPase HflX	NA	NA	NA	NA	NA
WP_004160132.1|526294_527548_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_004160130.1|527551_528556_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 3
NZ_CP024970	Erwinia amylovora strain E-2 chromosome, complete genome	3806898	1097258	1104533	3806898	protease	Bacillus_virus(33.33%)	6	NA	NA
WP_004156298.1|1097258_1097882_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	61.9	4.2e-63
WP_004156300.1|1097978_1099253_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	54.9	3.6e-130
WP_004156303.1|1099325_1099922_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A248SJ97	Salicola_phage	36.8	2.1e-27
WP_004156305.1|1100235_1101510_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.0	3.6e-130
WP_004156306.1|1101697_1104052_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	53.5	1.0e-226
WP_004156308.1|1104260_1104533_+	DNA-binding protein HU-beta	NA	A3E2K9	Sodalis_phage	60.7	1.3e-21
>prophage 4
NZ_CP024970	Erwinia amylovora strain E-2 chromosome, complete genome	3806898	2310100	2317041	3806898		Tupanvirus(33.33%)	7	NA	NA
WP_004158296.1|2310100_2310841_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	5.8e-11
WP_004158298.1|2310840_2311608_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_004158301.1|2311680_2312616_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L5H6	Tupanvirus	25.6	1.0e-17
WP_004158304.1|2312735_2313602_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	66.3	2.3e-107
WP_013036108.1|2313603_2314680_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.8	3.0e-101
WP_004158307.1|2315076_2316090_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	45.3	2.2e-77
WP_013036109.1|2316144_2317041_-	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	40.9	5.6e-45
