The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP024923	Sphingomonas sp. Cra20 chromosome, complete genome	4882990	3540611	3584597	4882990	tail,head,portal,tRNA,holin,protease	Catovirus(23.08%)	50	NA	NA
WP_100283107.1|3540611_3542198_-|holin	glucose-methanol-choline oxidoreductase	holin	A0A1V0S9J5	Catovirus	30.1	9.0e-54
WP_100283108.1|3542131_3543091_-	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_100283109.1|3543101_3543491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100283110.1|3543487_3543916_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_100283111.1|3543912_3545685_-	DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	35.1	6.3e-72
WP_100283112.1|3545801_3547253_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_100283113.1|3547317_3547929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100283114.1|3547892_3548858_-	alpha/beta fold hydrolase	NA	A0A249XU20	Mycobacterium_phage	25.0	5.4e-09
WP_100283115.1|3548938_3549211_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_100283116.1|3549212_3551033_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	28.5	4.5e-41
WP_100283117.1|3551126_3551366_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284466.1|3551374_3552304_-	phytoene/squalene synthase family protein	NA	NA	NA	NA	NA
WP_100283118.1|3552312_3552894_-	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.4	1.7e-13
WP_100283119.1|3552890_3554369_-	phytoene desaturase	NA	NA	NA	NA	NA
WP_100283120.1|3554365_3555523_-	lycopene beta-cyclase CrtY	NA	NA	NA	NA	NA
WP_158298920.1|3555640_3556255_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_158298921.1|3556344_3556923_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_100284467.1|3556964_3557486_+	DUF2585 domain-containing protein	NA	NA	NA	NA	NA
WP_100283123.1|3557516_3558293_+	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_100284468.1|3558246_3558645_+	DUF2141 domain-containing protein	NA	NA	NA	NA	NA
WP_100283124.1|3558680_3559178_-	calcium-binding protein	NA	NA	NA	NA	NA
WP_100283125.1|3559188_3560214_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_100284469.1|3560232_3560892_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	45.0	7.4e-26
WP_100283126.1|3561000_3561507_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	49.0	9.6e-34
WP_100283127.1|3561503_3562412_-	farnesyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_100283128.1|3562416_3562662_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_100283129.1|3562749_3564129_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_100283130.1|3564157_3565834_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	23.5	9.0e-28
WP_100283131.1|3565866_3566073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100283132.1|3566125_3567808_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.6	4.8e-13
WP_100283133.1|3567916_3569116_+	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_100283134.1|3569105_3570173_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_100283135.1|3570176_3572324_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_100284470.1|3572408_3572753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100283136.1|3572982_3573495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100283137.1|3573484_3574819_+	DNA-packaging protein	NA	A0A0K1LMR9	Caulobacter_phage	38.7	4.7e-64
WP_100284471.1|3574993_3575434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100283138.1|3575948_3576617_+	spermidine synthase	NA	NA	NA	NA	NA
WP_100283139.1|3576684_3576954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100283140.1|3577174_3578284_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	35.9	2.6e-47
WP_100283141.1|3578497_3578806_+	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	47.4	7.2e-08
WP_100283142.1|3578802_3579174_+|head,protease	HK97 family phage prohead protease	head,protease	NA	NA	NA	NA
WP_100283143.1|3579237_3580638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100283144.1|3581941_3582496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158298922.1|3582492_3582699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158298923.1|3582695_3583097_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_100283145.1|3583107_3583515_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_100283146.1|3583511_3583853_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_100283147.1|3583852_3584041_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_100283148.1|3584033_3584597_+|tail	tail tape measure protein	tail	D6PEW0	uncultured_phage	36.6	3.6e-05
>prophage 2
NZ_CP024923	Sphingomonas sp. Cra20 chromosome, complete genome	4882990	4856856	4865217	4882990		Bacillus_phage(16.67%)	9	NA	NA
WP_100284090.1|4856856_4857717_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	49.3	2.0e-68
WP_100284091.1|4858018_4858468_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_100284601.1|4858550_4858814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158299032.1|4859247_4859784_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284092.1|4860074_4861421_-	nucleotide sugar dehydrogenase	NA	A7IWZ0	Paramecium_bursaria_Chlorella_virus	31.0	4.2e-36
WP_100284093.1|4861476_4862487_-	NAD-dependent epimerase/dehydratase family protein	NA	M1IBX1	Acanthocystis_turfacea_Chlorella_virus	26.8	2.0e-22
WP_100284094.1|4862729_4863533_-	molybdopterin-synthase adenylyltransferase MoeB	NA	A0A1V0SAV8	Catovirus	30.4	7.1e-15
WP_100284095.1|4863529_4863979_-	dUTP diphosphatase	NA	K4JSC8	Caulobacter_phage	53.7	2.9e-34
WP_100284096.1|4863996_4865217_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	34.4	1.4e-38
>prophage 1
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	0	38810	155488	integrase	Bacillus_phage(100.0%)	36	NA	NA
WP_100284604.1|322_499_+	DUF3606 domain-containing protein	NA	NA	NA	NA	NA
WP_100284605.1|571_769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284606.1|4131_5691_-	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_100284607.1|7045_7246_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158299049.1|7316_7490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284608.1|7492_8110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284609.1|8113_8989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284610.1|9141_10047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284611.1|10046_11138_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284613.1|11645_13343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284614.1|13513_14515_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_100284615.1|14578_15631_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_100284616.1|15627_16341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284617.1|16495_16696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284618.1|16702_19528_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_100284739.1|19550_20951_-	conjugal transfer protein TraH	NA	NA	NA	NA	NA
WP_100284619.1|21016_21820_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_100284620.1|22050_22383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284621.1|22423_24256_-	conjugal transfer protein TraN	NA	NA	NA	NA	NA
WP_100284622.1|24252_24996_-	type-F conjugative transfer system pilin assembly protein TrbC	NA	NA	NA	NA	NA
WP_100284623.1|25006_26023_-	conjugal transfer pilus assembly protein TraU	NA	NA	NA	NA	NA
WP_100284624.1|26025_26292_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284625.1|26291_26948_-	type-F conjugative transfer system protein TraW	NA	NA	NA	NA	NA
WP_100284626.1|26944_27481_-	type VI secretion protein	NA	NA	NA	NA	NA
WP_100284627.1|27461_28139_-	TrbI F-type domain-containing protein	NA	NA	NA	NA	NA
WP_100284628.1|28131_28491_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284629.1|28495_31087_-	type IV secretion system protein TraC	NA	NA	NA	NA	NA
WP_100284740.1|31088_32063_-	type IV conjugative transfer system lipoprotein TraV	NA	NA	NA	NA	NA
WP_100284630.1|32074_32959_-	DsbC family protein	NA	NA	NA	NA	NA
WP_100284631.1|32945_34271_-	conjugal transfer protein TraB	NA	NA	NA	NA	NA
WP_100284632.1|34272_35079_-	type-F conjugative transfer system secretin TraK	NA	NA	NA	NA	NA
WP_100284633.1|35075_35642_-	conjugal transfer protein TraE	NA	NA	NA	NA	NA
WP_100284634.1|35643_35934_-	type IV conjugative transfer system protein TraL	NA	NA	NA	NA	NA
WP_100284635.1|35992_36313_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284741.1|37344_37779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284636.1|37817_38810_-	transglycosylase SLT domain-containing protein	NA	A0A0S2SXN2	Bacillus_phage	39.8	3.1e-12
>prophage 2
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	43239	44229	155488		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_100284641.1|43239_44229_+	zinc-dependent alcohol dehydrogenase family protein	NA	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	26.8	8.8e-07
>prophage 3
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	52421	61241	155488		Pandoravirus(33.33%)	9	NA	NA
WP_100284649.1|52421_52973_-	hypothetical protein	NA	S4VXZ7	Pandoravirus	30.7	1.9e-11
WP_100284650.1|53124_53478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100284651.1|53630_54980_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.4	5.2e-10
WP_100284652.1|54976_55651_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.9	2.4e-24
WP_100284653.1|55912_56794_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_100284654.1|57141_57882_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	34.1	2.3e-20
WP_100284655.1|58031_58994_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100284656.1|59001_59466_+	cupin domain-containing protein	NA	A0A291AU44	Pandoravirus	40.9	1.2e-27
WP_100284657.1|59624_61241_-	FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	31.0	6.4e-31
>prophage 4
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	69070	69913	155488		Mycobacterium_phage(100.0%)	1	NA	NA
WP_100284668.1|69070_69913_-	alpha/beta hydrolase	NA	A0A249XU20	Mycobacterium_phage	25.5	9.5e-10
>prophage 5
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	102292	103372	155488		Salmonella_phage(100.0%)	1	NA	NA
WP_100284696.1|102292_103372_-	DNA polymerase IV	NA	I6RSM4	Salmonella_phage	29.9	2.8e-14
>prophage 6
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	110402	113360	155488		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_100284747.1|110402_113360_-	AAA family ATPase	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	34.4	3.0e-10
>prophage 7
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	117091	125356	155488		Aeromonas_phage(33.33%)	4	NA	NA
WP_100284703.1|117091_118294_-	AAA family ATPase	NA	A0A1I9KF58	Aeromonas_phage	33.5	5.4e-43
WP_100284704.1|118458_119541_-	replication initiation protein	NA	NA	NA	NA	NA
WP_100284705.1|120198_121053_+	virulence-associated protein E	NA	A0A2P1JT30	Streptomyces_phage	31.2	1.3e-06
WP_100284706.1|121132_125356_+	methylase	NA	A0A2I7RSW2	Vibrio_phage	28.6	8.1e-09
>prophage 8
NZ_CP024924	Sphingomonas sp. Cra20 plasmid unnamed, complete sequence	155488	128538	129489	155488		Caulobacter_virus(100.0%)	1	NA	NA
WP_100284708.1|128538_129489_+	DUF1738 domain-containing protein	NA	K4JTR8	Caulobacter_virus	47.1	9.8e-64
