assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002787215.1_ASM278721v1	NZ_CP024851	Escherichia coli strain AR_0006, complete genome	1	1537572-1537721	1	CRISPRCasFinder	no		PD-DExK,csa3,cas3,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	54	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,csa3,cas3,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA|532aa|up_6|NZ_CP024851.1_1528878_1530474_+,NA	NA|238aa|up_9|NZ_CP024851.1_1526781_1527495_-	PRK12742, PRK12742, SDR family oxidoreductase	NA|198aa|up_8|NZ_CP024851.1_1527565_1528159_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|151aa|up_7|NZ_CP024851.1_1528303_1528756_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|532aa|up_6|NZ_CP024851.1_1528878_1530474_+	NA	NA|335aa|up_5|NZ_CP024851.1_1530529_1531534_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|NZ_CP024851.1_1531695_1532112_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|NZ_CP024851.1_1532157_1532661_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_2|NZ_CP024851.1_1532853_1534050_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|NZ_CP024851.1_1534105_1536961_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|NZ_CP024851.1_1536960_1537404_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|NZ_CP024851.1_1537757_1539269_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|NZ_CP024851.1_1539535_1540636_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|NZ_CP024851.1_1540635_1541718_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|501aa|down_3|NZ_CP024851.1_1541878_1543381_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|333aa|down_4|NZ_CP024851.1_1543458_1544457_-	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|440aa|down_5|NZ_CP024851.1_1544523_1545843_-	TIGR00791, Gluconate_permease, gluconate transporter	NA|255aa|down_6|NZ_CP024851.1_1545905_1546670_-	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|344aa|down_7|NZ_CP024851.1_1546693_1547725_-	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|188aa|down_8|NZ_CP024851.1_1547941_1548505_+	PRK09825, idnK, gluconokinase	NA|340aa|down_9|NZ_CP024851.1_1548508_1549528_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)
GCF_002787215.1_ASM278721v1	NZ_CP024851	Escherichia coli strain AR_0006, complete genome	2	4863705-4864340	1,1,2	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	PD-DExK,csa3,cas3,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	TTTATCCCCGCTGGCGCGGGGAACAC,CGATTTATCCCCGCTGGCGCGGGGAACAC,TTTATCCCCGCTGGCGCGGGGAACAC	26,29,26	0	0	NA	NA	I-E:I-E:I-E	10,9,9	10	TypeI-E	PD-DExK,csa3,cas3,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA	NA|254aa|up_9|NZ_CP024851.1_4855575_4856337_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP024851.1_4856317_4857367_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP024851.1_4857363_4857843_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP024851.1_4857842_4858553_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP024851.1_4858571_4858883_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP024851.1_4859076_4859400_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP024851.1_4859449_4860055_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP024851.1_4860054_4861482_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP024851.1_4861483_4862392_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP024851.1_4862643_4863681_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP024851.1_4864436_4864730_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP024851.1_4864726_4865650_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP024851.1_4865646_4866297_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP024851.1_4866278_4867025_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP024851.1_4867035_4868091_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP024851.1_4868105_4868642_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP024851.1_4868638_4870201_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP024851.1_4870298_4872998_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP024851.1_4873192_4873345_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP024851.1_4873609_4874344_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_002787215.1_ASM278721v1	NZ_CP024851	Escherichia coli strain AR_0006, complete genome	3	4891478-4891811	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no		PD-DExK,csa3,cas3,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,4	5	Orphan	PD-DExK,csa3,cas3,DEDDh,c2c9_V-U4,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA	NA|87aa|up_9|NZ_CP024851.1_4879949_4880210_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_8|NZ_CP024851.1_4880226_4880802_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|450aa|up_7|NZ_CP024851.1_4880936_4882285_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|287aa|up_6|NZ_CP024851.1_4882384_4883245_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP024851.1_4883241_4884021_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP024851.1_4883998_4885336_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP024851.1_4885429_4886884_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP024851.1_4886953_4887739_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP024851.1_4888057_4889335_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP024851.1_4889361_4890840_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP024851.1_4892149_4892821_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|291aa|down_1|NZ_CP024851.1_4893114_4893987_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_2|NZ_CP024851.1_4894046_4895345_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_CP024851.1_4895431_4897069_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_CP024851.1_4897296_4898088_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NZ_CP024851.1_4898159_4898495_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NZ_CP024851.1_4898494_4898743_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NZ_CP024851.1_4898820_4901055_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_CP024851.1_4901102_4902404_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_CP024851.1_4902460_4905217_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
