assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	1	596174-596261	1	CRISPRCasFinder	no		cas3,DEDDh,RT,DinG,csa3,WYL	Orphan	AAAAGAAATTCTACAGGCAATGCAAGTTGG	30	1	1	596204-596231	NZ_CP022291.1_1903422-1903395	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,csa3,WYL	NA|34aa|up_5|NZ_CP022291.1_590600_590702_+,NA|36aa|down_5|NZ_CP022291.1_601170_601278_+	NA|359aa|up_9|NZ_CP022291.1_587147_588224_+	TIGR01220, phosphomevalonate_kinase, phosphomevalonate kinase, ERG8-type, Gram-positive branch	NA|114aa|up_8|NZ_CP022291.1_588400_588742_+	pfam07293, DUF1450, Protein of unknown function (DUF1450)	NA|441aa|up_7|NZ_CP022291.1_588793_590116_-	PRK07251, PRK07251, FAD-containing oxidoreductase	NA|147aa|up_6|NZ_CP022291.1_590102_590543_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|34aa|up_5|NZ_CP022291.1_590600_590702_+	NA	NA|465aa|up_4|NZ_CP022291.1_591166_592561_+	pfam04740, LXG, LXG domain of WXG superfamily	NA|212aa|up_3|NZ_CP022291.1_592561_593197_+	pfam04276, DUF443, Protein of unknown function (DUF443)	NA|207aa|up_2|NZ_CP022291.1_593243_593864_+	pfam04276, DUF443, Protein of unknown function (DUF443)	NA|211aa|up_1|NZ_CP022291.1_594003_594636_+	pfam04276, DUF443, Protein of unknown function (DUF443)	NA|313aa|up_0|NZ_CP022291.1_595083_596022_+	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|179aa|down_0|NZ_CP022291.1_596519_597056_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|down_1|NZ_CP022291.1_597224_597701_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|down_2|NZ_CP022291.1_597740_599036_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|down_3|NZ_CP022291.1_599063_599585_+	pfam08741, YwhD, YwhD family	NA|337aa|down_4|NZ_CP022291.1_600083_601094_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|36aa|down_5|NZ_CP022291.1_601170_601278_+	NA	NA|139aa|down_6|NZ_CP022291.1_601370_601787_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|down_7|NZ_CP022291.1_601783_603445_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|212aa|down_8|NZ_CP022291.1_603778_604414_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|296aa|down_9|NZ_CP022291.1_604786_605674_+	cd01143, YvrC, Periplasmic binding protein YvrC
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	2	880185-880269	2	CRISPRCasFinder	no		cas3,DEDDh,RT,DinG,csa3,WYL	Orphan	TTTTCGAAATTCTCTGTGTTTGGGCCC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,csa3,WYL	NA,NA	NA|192aa|up_9|NZ_CP022291.1_866556_867132_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|up_8|NZ_CP022291.1_867136_867661_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|up_7|NZ_CP022291.1_867676_868252_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|up_6|NZ_CP022291.1_868411_871888_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|up_5|NZ_CP022291.1_871888_875542_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|up_4|NZ_CP022291.1_875705_876608_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|130aa|up_3|NZ_CP022291.1_876932_877322_+	PRK13673, PRK13673, hypothetical protein; Provisional	NA|439aa|up_2|NZ_CP022291.1_877492_878809_-	PRK13512, PRK13512, coenzyme A disulfide reductase; Provisional	NA|275aa|up_1|NZ_CP022291.1_878860_879685_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|103aa|up_0|NZ_CP022291.1_879798_880107_+	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|605aa|down_0|NZ_CP022291.1_880761_882576_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|870aa|down_1|NZ_CP022291.1_882779_885389_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|290aa|down_2|NZ_CP022291.1_885447_886317_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|382aa|down_3|NZ_CP022291.1_886426_887572_+	COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]	NA|214aa|down_4|NZ_CP022291.1_887555_888197_+	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|374aa|down_5|NZ_CP022291.1_888189_889311_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|172aa|down_6|NZ_CP022291.1_889288_889804_+	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|145aa|down_7|NZ_CP022291.1_890114_890549_+	pfam03642, MAP, MAP domain	NA|62aa|down_8|NZ_CP022291.1_890805_890991_-	pfam11151, DUF2929, Protein of unknown function (DUF2929)	NA|314aa|down_9|NZ_CP022291.1_891285_892227_+	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	3	1152972-1153063	3	CRISPRCasFinder	no	cas3	cas3,DEDDh,RT,DinG,csa3,WYL	Unclear	TAAGAAACACTAATCAATAAATTGATAA	28	0	0	NA	NA	NA	1	1	Unclear	cas3,DEDDh,RT,DinG,csa3,WYL	NA,NA	NA|215aa|up_9|NZ_CP022291.1_1142803_1143448_+	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]	NA|214aa|up_8|NZ_CP022291.1_1143454_1144096_+	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism]	NA|63aa|up_7|NZ_CP022291.1_1144455_1144644_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|125aa|up_6|NZ_CP022291.1_1145086_1145461_+	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|549aa|up_5|NZ_CP022291.1_1145475_1147122_+	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only]	cas3|687aa|up_4|NZ_CP022291.1_1147311_1149372_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|191aa|up_3|NZ_CP022291.1_1149574_1150147_+	PRK04424, PRK04424, transcription factor FapR	NA|329aa|up_2|NZ_CP022291.1_1150151_1151138_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|309aa|up_1|NZ_CP022291.1_1151130_1152057_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|245aa|up_0|NZ_CP022291.1_1152049_1152784_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|78aa|down_0|NZ_CP022291.1_1153154_1153388_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|244aa|down_1|NZ_CP022291.1_1153503_1154235_+	PRK00102, rnc, ribonuclease III; Reviewed	NA|1189aa|down_2|NZ_CP022291.1_1154381_1157948_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|417aa|down_3|NZ_CP022291.1_1157947_1159198_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|111aa|down_4|NZ_CP022291.1_1159184_1159517_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|456aa|down_5|NZ_CP022291.1_1159542_1160910_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|92aa|down_6|NZ_CP022291.1_1161344_1161620_+	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]	NA|168aa|down_7|NZ_CP022291.1_1161807_1162311_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|246aa|down_8|NZ_CP022291.1_1162310_1163048_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|down_9|NZ_CP022291.1_1163150_1163501_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	4	1869223-1869365	4	CRISPRCasFinder	no		cas3,DEDDh,RT,DinG,csa3,WYL	Orphan	CACCTATACCTCGTTCCGGGAAGGAACGTGTTCTAAAAGTTGAACTACTCCCGCA	55	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,csa3,WYL	NA|132aa|up_9|NZ_CP022291.1_1859154_1859550_-,NA|51aa|up_8|NZ_CP022291.1_1860384_1860537_-,NA|31aa|down_5|NZ_CP022291.1_1882113_1882206_-	NA|132aa|up_9|NZ_CP022291.1_1859154_1859550_-	NA	NA|51aa|up_8|NZ_CP022291.1_1860384_1860537_-	NA	NA|200aa|up_7|NZ_CP022291.1_1860561_1861161_-	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]	NA|157aa|up_6|NZ_CP022291.1_1861319_1861790_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|376aa|up_5|NZ_CP022291.1_1861794_1862922_-	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase	NA|241aa|up_4|NZ_CP022291.1_1863071_1863794_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|486aa|up_3|NZ_CP022291.1_1863786_1865244_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|354aa|up_2|NZ_CP022291.1_1865502_1866564_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|377aa|up_1|NZ_CP022291.1_1867319_1868449_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|151aa|up_0|NZ_CP022291.1_1868428_1868881_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|149aa|down_0|NZ_CP022291.1_1877312_1877759_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|317aa|down_1|NZ_CP022291.1_1877855_1878806_-	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family	NA|152aa|down_2|NZ_CP022291.1_1878811_1879267_-	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|430aa|down_3|NZ_CP022291.1_1879347_1880637_+	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional	NA|365aa|down_4|NZ_CP022291.1_1880929_1882024_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|31aa|down_5|NZ_CP022291.1_1882113_1882206_-	NA	NA|579aa|down_6|NZ_CP022291.1_1882214_1883951_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|181aa|down_7|NZ_CP022291.1_1884242_1884785_-	PRK13662, PRK13662, hypothetical protein; Provisional	NA|346aa|down_8|NZ_CP022291.1_1885086_1886124_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|326aa|down_9|NZ_CP022291.1_1886275_1887253_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	5	1903304-1903393	5	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,RT,DinG,csa3,WYL	Unclear	CCCCAACTTGCATTGCCTGTAGAATTTCTTTT	32	1	3	1903336-1903361|1903336-1903361|1903336-1903361	NZ_CP022291.1_768264-768289|NZ_CP022291.1_1904796-1904821|NZ_CP022291.1_2258448-2258473	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,csa3,WYL	NA|92aa|up_6|NZ_CP022291.1_1897550_1897826_+,NA|129aa|up_1|NZ_CP022291.1_1901808_1902195_-,NA|37aa|down_1|NZ_CP022291.1_1905557_1905668_-,NA|31aa|down_5|NZ_CP022291.1_1908673_1908766_-	NA|419aa|up_9|NZ_CP022291.1_1895473_1896730_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|NZ_CP022291.1_1896732_1896933_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|NZ_CP022291.1_1897079_1897544_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|NZ_CP022291.1_1897550_1897826_+	NA	NA|406aa|up_5|NZ_CP022291.1_1898103_1899321_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|NZ_CP022291.1_1899433_1900063_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|NZ_CP022291.1_1900052_1901096_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|NZ_CP022291.1_1901092_1901794_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|NZ_CP022291.1_1901808_1902195_-	NA	NA|253aa|up_0|NZ_CP022291.1_1902411_1903170_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|NZ_CP022291.1_1903698_1904685_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|37aa|down_1|NZ_CP022291.1_1905557_1905668_-	NA	NA|244aa|down_2|NZ_CP022291.1_1905753_1906485_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_3|NZ_CP022291.1_1906486_1907800_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_4|NZ_CP022291.1_1908091_1908592_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_5|NZ_CP022291.1_1908673_1908766_-	NA	DEDDh|185aa|down_6|NZ_CP022291.1_1908981_1909536_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_7|NZ_CP022291.1_1909603_1910674_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_8|NZ_CP022291.1_1910920_1911451_-	pfam11667, DUF3267, Putative zincin peptidase	NA|454aa|down_9|NZ_CP022291.1_1911620_1912982_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	6	2151881-2151983	6	CRISPRCasFinder	no	csa3	cas3,DEDDh,RT,DinG,csa3,WYL	Type I-A	AGCATCCAACTGTATTCCTCTATTTTTCAACTTTAGT	37	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,csa3,WYL	NA|77aa|up_5|NZ_CP022291.1_2146713_2146944_-,NA|364aa|up_0|NZ_CP022291.1_2150733_2151825_+,NA|35aa|down_0|NZ_CP022291.1_2152339_2152444_-,NA|53aa|down_1|NZ_CP022291.1_2153120_2153279_+	NA|237aa|up_9|NZ_CP022291.1_2142322_2143033_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP022291.1_2143154_2143598_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP022291.1_2143797_2144211_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP022291.1_2144666_2146040_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP022291.1_2146713_2146944_-	NA	NA|313aa|up_4|NZ_CP022291.1_2146974_2147913_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP022291.1_2148348_2149014_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP022291.1_2149165_2149486_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP022291.1_2149487_2150468_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP022291.1_2150733_2151825_+	NA	NA|35aa|down_0|NZ_CP022291.1_2152339_2152444_-	NA	NA|53aa|down_1|NZ_CP022291.1_2153120_2153279_+	NA	NA|286aa|down_2|NZ_CP022291.1_2153938_2154796_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_3|NZ_CP022291.1_2154863_2155646_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_4|NZ_CP022291.1_2155877_2157683_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_5|NZ_CP022291.1_2158363_2159902_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_6|NZ_CP022291.1_2159936_2162069_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_7|NZ_CP022291.1_2162080_2162515_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_8|NZ_CP022291.1_2162514_2163621_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2439aa|down_9|NZ_CP022291.1_2163939_2171256_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	7	2232126-2232250	7	CRISPRCasFinder	no		cas3,DEDDh,RT,DinG,csa3,WYL	Orphan	CCTCTTTACTCGAAAGCTCACAAAACCCTTGATATCA	37	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,csa3,WYL	NA|93aa|up_7|NZ_CP022291.1_2224220_2224499_+,NA|61aa|up_1|NZ_CP022291.1_2231048_2231231_-,NA|60aa|up_0|NZ_CP022291.1_2231880_2232060_-,NA	NA|809aa|up_9|NZ_CP022291.1_2220007_2222434_+	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family	NA|285aa|up_8|NZ_CP022291.1_2222493_2223348_-	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|93aa|up_7|NZ_CP022291.1_2224220_2224499_+	NA	NA|506aa|up_6|NZ_CP022291.1_2224508_2226026_+	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|272aa|up_5|NZ_CP022291.1_2226258_2227074_-	cd02605, HAD_SPP, sucrose-phosphatase, similar to Synechocystis sp PCC 6803 SPP	NA|142aa|up_4|NZ_CP022291.1_2227368_2227794_+	pfam03642, MAP, MAP domain	NA|235aa|up_3|NZ_CP022291.1_2228172_2228877_-	COG3527, AlsD, Alpha-acetolactate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|555aa|up_2|NZ_CP022291.1_2228913_2230578_-	PRK08617, PRK08617, acetolactate synthase AlsS	NA|61aa|up_1|NZ_CP022291.1_2231048_2231231_-	NA	NA|60aa|up_0|NZ_CP022291.1_2231880_2232060_-	NA	NA|133aa|down_0|NZ_CP022291.1_2232648_2233047_-	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|146aa|down_1|NZ_CP022291.1_2233060_2233498_-	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|268aa|down_2|NZ_CP022291.1_2233737_2234541_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|269aa|down_3|NZ_CP022291.1_2234545_2235352_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|287aa|down_4|NZ_CP022291.1_2235341_2236202_-	PRK13646, cbiO, energy-coupling factor transporter ATPase	NA|270aa|down_5|NZ_CP022291.1_2236198_2237008_-	PRK13648, cbiO, cobalt transporter ATP-binding subunit; Provisional	NA|123aa|down_6|NZ_CP022291.1_2237545_2237914_-	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|315aa|down_7|NZ_CP022291.1_2237930_2238875_-	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional	NA|130aa|down_8|NZ_CP022291.1_2238949_2239339_-	PRK05309, PRK05309, 30S ribosomal protein S11; Validated	NA|122aa|down_9|NZ_CP022291.1_2239362_2239728_-	PRK05179, rpsM, 30S ribosomal protein S13; Validated
GCF_002786535.1_ASM278653v1	NZ_CP022291	Staphylococcus aureus subsp. aureus strain EDCC5464 chromosome, complete genome	8	2605778-2605859	8	CRISPRCasFinder	no		cas3,DEDDh,RT,DinG,csa3,WYL	Orphan	TTCTACAGGCAATGCAAGTTGGGG	24	1	1	2605802-2605835	NZ_CP022291.1_977712-977679	NA	1	1	Orphan	cas3,DEDDh,RT,DinG,csa3,WYL	NA|163aa|up_9|NZ_CP022291.1_2596187_2596676_-,NA|43aa|up_3|NZ_CP022291.1_2603559_2603688_-,NA|167aa|up_1|NZ_CP022291.1_2604609_2605110_+,NA	NA|163aa|up_9|NZ_CP022291.1_2596187_2596676_-	NA	NA|256aa|up_8|NZ_CP022291.1_2596850_2597618_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|604aa|up_7|NZ_CP022291.1_2597978_2599790_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|163aa|up_6|NZ_CP022291.1_2600304_2600793_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|234aa|up_5|NZ_CP022291.1_2601068_2601770_-	cd13925, RPF, core lysozyme-like domain of resuscitation-promoting factor proteins	NA|352aa|up_4|NZ_CP022291.1_2602377_2603433_-	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only]	NA|43aa|up_3|NZ_CP022291.1_2603559_2603688_-	NA	NA|190aa|up_2|NZ_CP022291.1_2603842_2604412_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|167aa|up_1|NZ_CP022291.1_2604609_2605110_+	NA	NA|77aa|up_0|NZ_CP022291.1_2605329_2605560_+	COG4224, COG4224, Uncharacterized protein conserved in bacteria [Function unknown]	NA|126aa|down_0|NZ_CP022291.1_2605963_2606341_-	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only]	NA|274aa|down_1|NZ_CP022291.1_2606357_2607179_-	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs	NA|100aa|down_2|NZ_CP022291.1_2607197_2607497_-	COG4367, COG4367, Uncharacterized protein conserved in bacteria [Function unknown]	NA|186aa|down_3|NZ_CP022291.1_2607627_2608185_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|235aa|down_4|NZ_CP022291.1_2608177_2608882_+	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs	NA|337aa|down_5|NZ_CP022291.1_2608979_2609990_+	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|277aa|down_6|NZ_CP022291.1_2610009_2610840_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|342aa|down_7|NZ_CP022291.1_2610980_2612006_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|297aa|down_8|NZ_CP022291.1_2612226_2613117_-	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|447aa|down_9|NZ_CP022291.1_2613216_2614557_-	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]
