The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP024780	Pectobacterium brasiliense strain BZA12 chromosome, complete genome	4924809	724503	730355	4924809		uncultured_Caudovirales_phage(50.0%)	7	NA	NA
WP_039288018.1|724503_725295_+	urea ABC transporter ATP-binding protein UrtD	NA	A0A2R8FG22	Brazilian_cedratvirus	27.0	1.2e-11
WP_100016819.1|725296_725995_+	urea ABC transporter ATP-binding subunit UrtE	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	1.3e-12
WP_100016820.1|726812_727259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072010037.1|727401_727722_+	metalloregulator ArsR/SmtB family transcription factor	NA	A0A2H4J145	uncultured_Caudovirales_phage	48.5	1.5e-21
WP_100016821.1|727768_729058_+	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	72.8	7.6e-168
WP_100016822.1|729070_729496_+	glutaredoxin-dependent arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	71.4	8.0e-50
WP_014915501.1|729530_730355_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-20
>prophage 2
NZ_CP024780	Pectobacterium brasiliense strain BZA12 chromosome, complete genome	4924809	1060744	1070256	4924809	tRNA	Tupanvirus(33.33%)	10	NA	NA
WP_014915266.1|1060744_1062463_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.0	5.0e-58
WP_100016942.1|1062598_1063024_+	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA	NA
WP_009112984.1|1063084_1063381_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.1e-13
WP_100016943.1|1063385_1065773_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	28.9	5.1e-08
WP_014915263.1|1065787_1066771_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	39.3	4.5e-35
WP_106120997.1|1066954_1066999_-	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_005968887.1|1067089_1067446_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_010275699.1|1067489_1067687_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_071822580.1|1067782_1068325_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.5	4.8e-15
WP_014915262.1|1068327_1070256_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.6	1.0e-128
>prophage 3
NZ_CP024780	Pectobacterium brasiliense strain BZA12 chromosome, complete genome	4924809	1371738	1439939	4924809	tail,integrase,protease,plate,transposase,tRNA	Burkholderia_virus(23.08%)	70	1370513:1370528	1397904:1397919
1370513:1370528	attL	CTCAGCCAGACGCCGC	NA	NA	NA	NA
WP_100017047.1|1371738_1372968_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1V0E8G8	Vibrio_phage	49.0	7.1e-107
WP_100017048.1|1373251_1373893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100017049.1|1374267_1376049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100017050.1|1376266_1376752_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_100018494.1|1377218_1377671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100017051.1|1378199_1379171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157765227.1|1379608_1379941_-	hypothetical protein	NA	A0A2H4J2P5	uncultured_Caudovirales_phage	48.3	6.1e-13
WP_100018495.1|1380006_1380138_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100016765.1|1380212_1381362_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.4	4.1e-48
WP_039554720.1|1382210_1382456_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_039554718.1|1382445_1382730_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_100017052.1|1383134_1383602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100017053.1|1384417_1385296_+	cell envelope biogenesis protein OmpA	NA	NA	NA	NA	NA
WP_100017054.1|1385450_1385915_-	DNA gyrase inhibitor	NA	NA	NA	NA	NA
WP_014914981.1|1386146_1386476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100017055.1|1386547_1387084_-	DUF2892 domain-containing protein	NA	NA	NA	NA	NA
WP_014914979.1|1387473_1388874_+	EmmdR/YeeO family multidrug/toxin efflux MATE transporter	NA	NA	NA	NA	NA
WP_039287132.1|1388918_1390088_-	MFS transporter	NA	NA	NA	NA	NA
WP_155121807.1|1390250_1390400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014914977.1|1390439_1390955_-	outer membrane protein OmpX	NA	A5LH44	Enterobacteria_phage	32.8	1.2e-15
WP_014914976.1|1391331_1392219_+	threonine/homoserine exporter RhtA	NA	NA	NA	NA	NA
WP_039509059.1|1392206_1392758_-	adenylate kinase	NA	A0A097BYE2	Leuconostoc_phage	38.1	9.8e-16
WP_014914974.1|1393120_1393624_+	DNA starvation/stationary phase protection protein Dps	NA	A0A222YYG6	Streptomyces_phage	28.9	1.8e-08
WP_010294862.1|1394014_1394761_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_010294864.1|1394787_1395447_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_014914973.1|1395443_1396166_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	41.8	3.3e-35
WP_100017056.1|1396217_1398086_-	peptidase M3	NA	NA	NA	NA	NA
1397904:1397919	attR	CTCAGCCAGACGCCGC	NA	NA	NA	NA
WP_100017057.1|1398172_1399141_-	DNA-binding protein YbiB	NA	NA	NA	NA	NA
WP_157765228.1|1399432_1399588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100017058.1|1401484_1402102_-|tail	tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	39.9	1.9e-31
WP_100018496.1|1402101_1402527_-|tail	tail fiber protein	tail	K7P7Q7	Enterobacteria_phage	57.1	4.6e-37
WP_100017059.1|1403957_1404539_-|tail	phage tail protein I	tail	A4JWL7	Burkholderia_virus	61.2	1.1e-60
WP_100017060.1|1404531_1405635_-|plate	baseplate protein	plate	A4JWL6	Burkholderia_virus	54.0	5.1e-104
WP_010286901.1|1405625_1405973_-|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	63.0	8.6e-34
WP_100017061.1|1406031_1406613_-|plate	phage baseplate assembly protein V	plate	Q6QIA1	Burkholderia_phage	44.9	7.9e-24
WP_100017062.1|1406609_1407770_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	47.8	2.3e-83
WP_100017063.1|1407757_1407970_-	hypothetical protein	NA	A4JWL2	Burkholderia_virus	58.6	2.6e-17
WP_039509051.1|1407959_1408889_-|tail	phage tail protein	tail	A4JWL1	Burkholderia_virus	46.8	2.1e-42
WP_100017064.1|1408888_1411360_-|tail	phage tail tape measure protein	tail	NA	NA	NA	NA
WP_086002476.1|1411576_1411720_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_100017065.1|1411664_1411985_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_100017067.1|1412123_1412420_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	V5UTY8	Synechococcus_phage	63.8	2.9e-22
WP_010281046.1|1412476_1413001_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	67.2	1.6e-68
WP_010281043.1|1413000_1414428_-|tail	tail protein	tail	A4JWK5	Burkholderia_virus	73.4	1.2e-203
WP_100017068.1|1414417_1414615_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	58.5	2.4e-09
WP_040043083.1|1414611_1415079_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010281036.1|1415309_1415621_-	hypothetical protein	NA	Q6QIC3	Burkholderia_phage	44.6	4.5e-18
WP_010281034.1|1415613_1415943_-	hypothetical protein	NA	Q5ZQY8	Pseudomonas_phage	45.8	1.5e-19
WP_100017069.1|1415932_1416607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100017071.1|1416596_1417208_-	transglycosylase SLT domain-containing protein	NA	J9SHG5	Pseudomonas_phage	59.1	1.0e-58
WP_100017072.1|1417209_1417539_-	hypothetical protein	NA	A4JWP3	Burkholderia_virus	59.3	2.4e-25
WP_100017073.1|1417778_1419146_-	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_100017076.1|1419148_1420477_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_043901842.1|1420504_1422232_-	type I secretion system permease/ATPase	NA	F2Y1V6	Organic_Lake_phycodnavirus	31.6	5.1e-18
WP_010281012.1|1422249_1422561_-|protease	AprI/Inh family metalloprotease inhibitor	protease	NA	NA	NA	NA
WP_014914952.1|1422666_1424097_-|protease	serralysin family metalloprotease	protease	NA	NA	NA	NA
WP_100017077.1|1424617_1426717_-	ATP-dependent DNA helicase DinG	NA	A0A127AW80	Bacillus_phage	25.9	8.6e-44
WP_040043076.1|1426899_1427745_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_100017079.1|1427797_1428445_+	LysE family translocator	NA	NA	NA	NA	NA
WP_039273042.1|1428732_1429272_-	isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_100017081.1|1429372_1431679_-	beta-glucosidase BglX	NA	NA	NA	NA	NA
WP_080163747.1|1432075_1432762_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_100017083.1|1432839_1433787_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_100017085.1|1433936_1434446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_039509035.1|1434508_1434865_-	FMN-binding protein	NA	NA	NA	NA	NA
WP_014914940.1|1434925_1435468_-	class IV adenylate cyclase	NA	NA	NA	NA	NA
WP_100017087.1|1435917_1436448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100017089.1|1436464_1437412_-	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_039519018.1|1437404_1438817_-	S-methylmethionine permease	NA	NA	NA	NA	NA
WP_039499402.1|1439006_1439939_-|tRNA	tRNA dihydrouridine(16) synthase DusC	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP024780	Pectobacterium brasiliense strain BZA12 chromosome, complete genome	4924809	1718071	1726973	4924809		Synechococcus_phage(42.86%)	8	NA	NA
WP_010281382.1|1718071_1719478_-	NADP-dependent phosphogluconate dehydrogenase	NA	A0A1D7RI04	Synechococcus_phage	29.5	4.3e-31
WP_014914740.1|1719708_1720605_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	41.0	1.1e-48
WP_039509315.1|1720897_1722271_-	phosphomannomutase CpsG	NA	A0A127AWJ1	Bacillus_phage	28.9	2.8e-35
WP_100017295.1|1722277_1723024_-	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	34.4	1.7e-07
WP_039468198.1|1723025_1724429_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	32.2	2.0e-57
WP_039468195.1|1724438_1724897_-	GDP-mannose mannosyl hydrolase	NA	NA	NA	NA	NA
WP_014914735.1|1724898_1725861_-	GDP-L-fucose synthase	NA	M4R1H4	Synechococcus_phage	50.8	1.7e-84
WP_014914734.1|1725863_1726973_-	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	65.5	1.7e-128
>prophage 5
NZ_CP024780	Pectobacterium brasiliense strain BZA12 chromosome, complete genome	4924809	3821909	3830630	4924809		Dickeya_phage(42.86%)	7	NA	NA
WP_014916845.1|3821909_3822734_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.9	2.4e-13
WP_039277264.1|3822745_3823555_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.5	2.3e-29
WP_010277593.1|3823762_3824335_+	peptidylprolyl isomerase A	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	35.2	2.0e-11
WP_014916843.1|3824421_3825699_-	pectate lyase	NA	A0A1B1IPS8	uncultured_Mediterranean_phage	33.1	2.9e-34
WP_039277268.1|3825875_3827000_-	pectate lyase	NA	A0A140XB77	Dickeya_phage	76.1	1.9e-58
WP_014916841.1|3827710_3828838_-	polysaccharide lyase	NA	A0A140XB77	Dickeya_phage	70.3	2.0e-55
WP_010277576.1|3829505_3830630_-	polysaccharide lyase	NA	A0A140XB77	Dickeya_phage	71.7	1.7e-54
>prophage 6
NZ_CP024780	Pectobacterium brasiliense strain BZA12 chromosome, complete genome	4924809	4447928	4480121	4924809	transposase,integrase,plate	Enterobacteria_phage(20.0%)	29	4438876:4438891	4480312:4480327
4438876:4438891	attL	TCAGGAGCTGGAAGTC	NA	NA	NA	NA
WP_100018283.1|4447928_4449143_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	54.9	2.7e-130
WP_100018558.1|4449285_4450143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_040038069.1|4450234_4450441_+	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
WP_100018284.1|4450733_4451945_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_100018559.1|4452165_4453299_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_100018285.1|4453291_4455181_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_100018286.1|4455221_4455626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100018287.1|4455728_4456142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139294544.1|4456599_4456902_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_100018288.1|4457002_4457668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100018289.1|4457985_4459278_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA	NA
WP_100018290.1|4459246_4459687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100018291.1|4459885_4460965_-	hypothetical protein	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	34.1	1.1e-07
WP_100016837.1|4461132_4462252_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.4	1.1e-50
WP_100018292.1|4462262_4463996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157765244.1|4464039_4464990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100018294.1|4465957_4467562_+	sporadically distributed, TIGR04141 family protein	NA	NA	NA	NA	NA
WP_039273700.1|4468104_4468299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100018295.1|4468300_4469050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014699424.1|4469310_4469796_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_100018296.1|4470028_4470658_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100018297.1|4471104_4471287_+	DUF4102 domain-containing protein	NA	E5AGD0	Erwinia_phage	52.6	5.7e-13
WP_100018298.1|4472151_4472673_+	DNA mismatch endonuclease Vsr	NA	E5E3X5	Burkholderia_phage	47.6	6.0e-31
WP_014699424.1|4472928_4473414_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_100018301.1|4473855_4474488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010282535.1|4475900_4476404_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_039276617.1|4476436_4477915_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_005972060.1|4477920_4478352_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_100018302.1|4478354_4480121_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
4480312:4480327	attR	TCAGGAGCTGGAAGTC	NA	NA	NA	NA
>prophage 7
NZ_CP024780	Pectobacterium brasiliense strain BZA12 chromosome, complete genome	4924809	4561451	4566884	4924809		Mycobacterium_phage(33.33%)	6	NA	NA
WP_039280691.1|4561451_4561916_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	56.7	3.7e-48
WP_014916298.1|4561971_4562709_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	38.4	8.5e-39
WP_014916297.1|4563081_4564044_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	73.6	3.0e-137
WP_100018323.1|4564068_4566231_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	50.2	7.1e-203
WP_010280810.1|4566227_4566635_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A220BYR7	Staphylococcus_phage	26.5	1.1e-06
WP_014916295.1|4566644_4566884_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	59.5	9.1e-19
