The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP020987	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R chromosome, complete genome	5124593	405065	414999	5124593	tail	Xanthomonas_virus(66.67%)	8	NA	NA
WP_099828278.1|405065_405719_-	hypothetical protein	NA	C4ML21	Xanthomonas_virus	48.8	1.3e-38
WP_099828279.1|405721_406399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046735379.1|406400_406712_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099828280.1|406708_411121_-	hypothetical protein	NA	C4ML20	Xanthomonas_virus	49.1	0.0e+00
WP_099828281.1|411111_411504_-	C40 family peptidase	NA	Q2NPH1	Xanthomonas_virus	51.2	4.1e-32
WP_099828282.1|411503_411965_-	DUF1833 family protein	NA	Q52PL0	Xanthomonas_phage	46.4	4.2e-36
WP_099828283.1|411961_412318_-	hypothetical protein	NA	Q52PL1	Xanthomonas_phage	46.2	8.6e-21
WP_099828284.1|412317_414999_-|tail	phage tail tape measure protein	tail	C4ML16	Xanthomonas_virus	32.9	1.8e-94
>prophage 2
NZ_CP020987	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R chromosome, complete genome	5124593	1569565	1577588	5124593		Escherichia_phage(28.57%)	7	NA	NA
WP_099804653.1|1569565_1570912_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	27.1	2.0e-33
WP_007962673.1|1570958_1572362_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.8	4.2e-47
WP_089095960.1|1572636_1573803_-	nucleotide sugar dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	58.4	7.2e-117
WP_099804654.1|1574143_1575043_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.8	1.2e-26
WP_007971517.1|1575039_1575597_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.3	3.9e-44
WP_007971516.1|1575593_1576481_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.4	1.5e-93
WP_099804655.1|1576532_1577588_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	45.3	3.2e-79
>prophage 3
NZ_CP020987	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R chromosome, complete genome	5124593	1587363	1597472	5124593	transposase	Shigella_phage(16.67%)	8	NA	NA
WP_099803754.1|1587363_1588514_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	63.3	1.3e-97
WP_099804660.1|1588574_1588709_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_099804661.1|1588780_1589257_-	GtrA family protein	NA	NA	NA	NA	NA
WP_099804662.1|1589335_1590247_-	NAD-dependent epimerase/dehydratase family protein	NA	E5ES47	Bathycoccus_sp._RCC1105_virus	21.6	5.3e-06
WP_089095950.1|1590224_1591259_-	GDP-mannose 4,6-dehydratase	NA	A0A1J0F996	Only_Syngen_Nebraska_virus	56.6	2.3e-106
WP_099804663.1|1591255_1594966_-	glycosyltransferase	NA	A0A218MKE2	uncultured_virus	24.2	1.7e-15
WP_099804664.1|1594965_1596252_-	FkbM family methyltransferase	NA	A0A1V0SAF0	Catovirus	26.4	1.8e-12
WP_089095947.1|1596251_1597472_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.3	8.0e-10
>prophage 4
NZ_CP020987	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R chromosome, complete genome	5124593	2448914	2512681	5124593	tRNA,tail,protease	Bacillus_phage(22.22%)	59	NA	NA
WP_007968272.1|2448914_2449466_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_007968270.1|2449534_2450062_+|tail	phage tail protein	tail	A0A0U4JYA4	Arthrobacter_phage	28.0	1.0e-09
WP_099803320.1|2450122_2450659_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_099803321.1|2450663_2451221_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011257259.1|2451239_2451527_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099803322.1|2451910_2452705_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	27.2	4.9e-08
WP_003482308.1|2452704_2453454_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_022560464.1|2453465_2454011_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
WP_003482305.1|2454007_2454670_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_022560466.1|2454659_2454950_+	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_089142541.1|2454960_2456016_+	VacJ family lipoprotein	NA	NA	NA	NA	NA
WP_089142542.1|2456148_2456529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007968256.1|2456532_2457078_-	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	33.9	2.0e-16
WP_099802889.1|2457231_2457621_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099803323.1|2457839_2459420_-	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_158525792.1|2459556_2459703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033481426.1|2459979_2460210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007968253.1|2460373_2460994_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_007968252.1|2461132_2461513_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007971149.1|2461729_2463145_+	amino acid permease	NA	NA	NA	NA	NA
WP_099803324.1|2463375_2465850_-	glycoside hydrolase family 92 protein	NA	NA	NA	NA	NA
WP_099803325.1|2466702_2467092_-	DUF2628 domain-containing protein	NA	NA	NA	NA	NA
WP_099803326.1|2467212_2468961_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	31.6	5.3e-15
WP_089096453.1|2469052_2470264_-	carbohydrate diacid regulon transcriptional regulator CdaR	NA	NA	NA	NA	NA
WP_099803327.1|2470497_2471667_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	39.0	1.2e-42
WP_099803328.1|2471692_2473003_-	MFS transporter	NA	NA	NA	NA	NA
WP_099803329.1|2473482_2474739_-	peptidase M19	NA	NA	NA	NA	NA
WP_022560498.1|2475025_2475346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007968235.1|2475464_2476631_-	class I SAM-dependent rRNA methyltransferase	NA	NA	NA	NA	NA
WP_039571260.1|2476895_2477852_+	TerC family protein	NA	K4F9T9	Cronobacter_phage	30.6	1.0e-31
WP_099803330.1|2478190_2478976_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_099803331.1|2479095_2480190_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
WP_099803332.1|2480429_2482730_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_099206281.1|2482922_2483780_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_099803333.1|2483941_2485282_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
WP_022560505.1|2486859_2488584_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_007968218.1|2488609_2489047_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_002805908.1|2489085_2489226_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_007968215.1|2489468_2490797_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_005912436.1|2491073_2492174_+	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	37.1	1.1e-53
WP_099803334.1|2493217_2494324_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_089094340.1|2494438_2496883_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.7	1.6e-113
WP_022557777.1|2496950_2497787_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_005912440.1|2497971_2498778_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_007968206.1|2499055_2500249_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033480025.1|2500402_2501065_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_099828347.1|2501150_2501912_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005912447.1|2501958_2502381_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_005912449.1|2502384_2502798_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_007971889.1|2503344_2503752_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_007968197.1|2504004_2504772_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_005912451.1|2504779_2505049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099803335.1|2505123_2506584_-	cardiolipin synthase	NA	NA	NA	NA	NA
WP_099803336.1|2506884_2507610_+	YafY family transcriptional regulator	NA	NA	NA	NA	NA
WP_042676190.1|2507658_2508024_+	DUF1330 domain-containing protein	NA	NA	NA	NA	NA
WP_099803337.1|2508147_2509275_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_007971900.1|2509461_2510163_-	2OG-Fe(II) oxygenase	NA	E3SK61	Synechococcus_phage	47.2	1.0e-17
WP_007968187.1|2510428_2511769_-	outer membrane protein transport protein	NA	NA	NA	NA	NA
WP_003482177.1|2511988_2512681_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
>prophage 5
NZ_CP020987	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6994R chromosome, complete genome	5124593	3670721	3745727	5124593	capsid,portal,holin,transposase,integrase,terminase,head,plate,tail,protease	Stenotrophomonas_phage(55.0%)	76	3664582:3664599	3705573:3705590
3664582:3664599	attL	GGCAAGACCACGCTGCTG	NA	NA	NA	NA
WP_099803720.1|3670721_3672803_+|holin	phospholipase C, phosphocholine-specific	holin	NA	NA	NA	NA
WP_099803721.1|3672971_3675131_+	S46 family peptidase	NA	NA	NA	NA	NA
WP_007968929.1|3675224_3675869_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_099803722.1|3676198_3677497_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_099803723.1|3677564_3678647_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_007968935.1|3678860_3679607_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003483730.1|3679637_3681104_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.9	4.1e-85
WP_099803724.1|3681299_3682124_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_099803725.1|3684089_3684509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099803726.1|3684697_3685441_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_007968943.1|3685842_3686385_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_099803727.1|3686365_3687502_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_007973706.1|3687762_3689289_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003483747.1|3689461_3691564_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_099803728.1|3691676_3693020_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	33.3	6.5e-29
WP_003483753.1|3693077_3693767_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_033481216.1|3693949_3695596_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_033481211.1|3695745_3696054_+	glutaredoxin 3	NA	A0A2L0UZG6	Agrobacterium_phage	43.2	2.7e-07
WP_007968963.1|3696050_3696446_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003483762.1|3696672_3697680_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_005927840.1|3697824_3698586_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_099803730.1|3699811_3700462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099828403.1|3700463_3701423_-|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	56.2	9.2e-94
WP_089112962.1|3702071_3702275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099828361.1|3702340_3702565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851002.1|3702561_3702834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014091203.1|3702826_3703009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077708921.1|3703001_3703376_-	hypothetical protein	NA	V9IQL6	Stenotrophomonas_phage	46.1	2.4e-18
WP_099828362.1|3703505_3703778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099828363.1|3703777_3704065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099828364.1|3704061_3704280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099828404.1|3704603_3707276_-	bifunctional DNA primase/helicase	NA	V9IQW5	Stenotrophomonas_phage	69.6	0.0e+00
3705573:3705590	attR	CAGCAGCGTGGTCTTGCC	NA	NA	NA	NA
WP_008572770.1|3707309_3707522_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099828365.1|3707518_3707797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099828366.1|3707807_3708128_-	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	57.6	2.6e-24
WP_008572763.1|3708130_3708388_-	DNA-binding protein	NA	A0A2H4JE67	uncultured_Caudovirales_phage	44.6	6.6e-07
WP_099803732.1|3708458_3708896_+	helix-turn-helix transcriptional regulator	NA	E5E3P4	Burkholderia_phage	32.9	6.4e-10
WP_133125215.1|3709125_3709602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099803733.1|3709689_3710676_-	phage late control D family protein	NA	V9IQM7	Stenotrophomonas_phage	52.6	2.4e-89
WP_099803734.1|3710672_3711074_-|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	62.9	3.2e-40
WP_099803735.1|3711086_3713957_-|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	48.7	3.9e-204
WP_005922203.1|3713986_3714100_-|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
WP_008572745.1|3714108_3714411_-|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	67.4	2.2e-25
WP_099803736.1|3714456_3714966_-|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	76.3	8.4e-70
WP_099803737.1|3714995_3716162_-|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	62.1	1.6e-132
WP_099803738.1|3716173_3716533_-|plate	baseplate assembly protein	plate	V9IQW0	Stenotrophomonas_phage	63.6	1.6e-35
WP_099803739.1|3716529_3717093_-|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	47.0	4.8e-26
WP_099803740.1|3717234_3717909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099803741.1|3717911_3718205_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099803742.1|3718277_3720077_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	39.0	2.3e-85
WP_099803743.1|3720089_3720635_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	56.0	4.9e-52
WP_099828367.1|3720627_3721518_-|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	53.0	4.0e-83
WP_133125214.1|3722024_3722441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099803744.1|3722421_3722883_-	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	54.1	6.1e-35
WP_099803745.1|3722870_3723290_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	64.4	9.7e-40
WP_099803746.1|3723286_3723775_-	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	53.6	5.3e-29
WP_099803747.1|3723774_3724416_-	glycoside hydrolase family 19 protein	NA	V9IQK6	Stenotrophomonas_phage	59.8	5.1e-48
WP_005922189.1|3724412_3724688_-|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	1.3e-21
WP_005929454.1|3724680_3725037_-	membrane protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	3.5e-22
WP_039586330.1|3725041_3725251_-|tail	tail protein	tail	K4PAW7	Burkholderia_phage	58.0	2.7e-14
WP_099803748.1|3725250_3725718_-|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	1.8e-31
WP_099803749.1|3725816_3726536_-|terminase	terminase	terminase	Q9ZXM2	Pseudomonas_virus	62.1	3.8e-68
WP_099803750.1|3726539_3727559_-|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	70.6	3.5e-136
WP_099803751.1|3727603_3728446_-|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	53.3	2.2e-67
WP_099803752.1|3728567_3730352_+|terminase	terminase ATPase subunit family protein	terminase	V9IQL5	Stenotrophomonas_phage	76.7	2.1e-272
WP_099803753.1|3730351_3731365_+|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	71.9	1.5e-139
WP_078560558.1|3731390_3731636_+	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	53.8	2.8e-15
WP_089094893.1|3731553_3732255_+	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	76.5	3.8e-105
WP_089094894.1|3732425_3732842_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_099803754.1|3734095_3735245_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	63.3	1.3e-97
WP_099804865.1|3738888_3739878_+	chemotaxis protein CheB	NA	NA	NA	NA	NA
WP_131469915.1|3740039_3740288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099803755.1|3740506_3741775_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_007968966.1|3742303_3743596_+	trigger factor	NA	NA	NA	NA	NA
WP_002806026.1|3743688_3744315_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
WP_003483788.1|3744440_3745727_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.9	5.3e-137
