assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002759155.1_ASM275915v1	NZ_CP020975	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 chromosome, complete genome	1	2170329-2170473	1	CRISPRCasFinder	no		DEDDh,cas3,WYL,csa3,DinG,PD-DExK	Orphan	GCGGGAGAAGGCAATCTCCGTCTGGGTTGAGGATCTGGCGGCC	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA|68aa|up_7|NZ_CP020975.1_2162377_2162581_+,NA|74aa|up_5|NZ_CP020975.1_2164502_2164724_+,NA	NA|91aa|up_9|NZ_CP020975.1_2161217_2161490_-	pfam14415, DUF4424, Domain of unknown function (DUF4424)	NA|188aa|up_8|NZ_CP020975.1_2161810_2162374_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|68aa|up_7|NZ_CP020975.1_2162377_2162581_+	NA	NA|541aa|up_6|NZ_CP020975.1_2162789_2164412_-	cd09002, GH43_XYL-like, Glycosyl hydrolase family 43, beta-D-xylosidase (uncharacterized)	NA|74aa|up_5|NZ_CP020975.1_2164502_2164724_+	NA	NA|337aa|up_4|NZ_CP020975.1_2164720_2165731_+	cd19161, AKR_AKR15A1, Microbacterium luteolum pyridoxal 4-dehydrogenase (PLD) and similar proteins	NA|291aa|up_3|NZ_CP020975.1_2165727_2166600_+	COG3618, COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|257aa|up_2|NZ_CP020975.1_2166596_2167367_+	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs	NA|286aa|up_1|NZ_CP020975.1_2167581_2168439_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|441aa|up_0|NZ_CP020975.1_2168962_2170285_+	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA	NA|120aa|down_0|NZ_CP020975.1_2170729_2171089_-	pfam05336, rhaM, L-rhamnose mutarotase	NA|434aa|down_1|NZ_CP020975.1_2171091_2172393_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|250aa|down_2|NZ_CP020975.1_2172573_2173323_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|376aa|down_3|NZ_CP020975.1_2173448_2174576_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|496aa|down_4|NZ_CP020975.1_2174728_2176216_+	pfam03572, Peptidase_S41, Peptidase family S41	NA|195aa|down_5|NZ_CP020975.1_2176469_2177054_+	COG1971, COG1971, Predicted membrane protein [Function unknown]	NA|1150aa|down_6|NZ_CP020975.1_2177219_2180669_-	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain	NA|881aa|down_7|NZ_CP020975.1_2181356_2183999_+	pfam15979, Glyco_hydro_115, Glycosyl hydrolase family 115	NA|785aa|down_8|NZ_CP020975.1_2184092_2186447_-	cd11748, GH94N_NdvB_like, Glycoside hydrolase family 94 N-terminal-like domain of NdvB-like proteins	NA|461aa|down_9|NZ_CP020975.1_2186494_2187877_-	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily
GCF_002759155.1_ASM275915v1	NZ_CP020975	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 chromosome, complete genome	2	2478674-2478799	2	CRISPRCasFinder	no		DEDDh,cas3,WYL,csa3,DinG,PD-DExK	Orphan	CCCTCTCCCGCAAGCGGGAGAGGGAAAGCGTCT	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA|173aa|up_5|NZ_CP020975.1_2470367_2470886_-,NA|90aa|up_4|NZ_CP020975.1_2471313_2471583_-,NA|111aa|up_3|NZ_CP020975.1_2471878_2472211_+,NA|96aa|down_6|NZ_CP020975.1_2494999_2495287_-	NA|600aa|up_9|NZ_CP020975.1_2465226_2467026_-	PRK08186, PRK08186, allophanate hydrolase; Provisional	NA|159aa|up_8|NZ_CP020975.1_2467375_2467852_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|190aa|up_7|NZ_CP020975.1_2467915_2468485_-	PRK11640, PRK11640, putative transcriptional regulator; Provisional	NA|191aa|up_6|NZ_CP020975.1_2468601_2469174_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|173aa|up_5|NZ_CP020975.1_2470367_2470886_-	NA	NA|90aa|up_4|NZ_CP020975.1_2471313_2471583_-	NA	NA|111aa|up_3|NZ_CP020975.1_2471878_2472211_+	NA	NA|642aa|up_2|NZ_CP020975.1_2472525_2474451_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|463aa|up_1|NZ_CP020975.1_2474800_2476189_-	cd02652, nuc_hydro_2, NH_2: A subgroup of nucleoside hydrolases	NA|97aa|up_0|NZ_CP020975.1_2476543_2476834_-	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|1329aa|down_0|NZ_CP020975.1_2479924_2483911_-	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|1135aa|down_1|NZ_CP020975.1_2483907_2487312_-	TIGR01450, recC, exodeoxyribonuclease V, gamma subunit	NA|1592aa|down_2|NZ_CP020975.1_2487664_2492440_-	pfam03797, Autotransporter, Autotransporter beta-domain	NA|184aa|down_3|NZ_CP020975.1_2492701_2493253_+	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|176aa|down_4|NZ_CP020975.1_2493300_2493828_+	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|183aa|down_5|NZ_CP020975.1_2494432_2494981_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|96aa|down_6|NZ_CP020975.1_2494999_2495287_-	NA	NA|265aa|down_7|NZ_CP020975.1_2495668_2496463_+	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|250aa|down_8|NZ_CP020975.1_2496462_2497212_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|182aa|down_9|NZ_CP020975.1_2497223_2497769_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD
GCF_002759155.1_ASM275915v1	NZ_CP020975	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 chromosome, complete genome	3	2568130-2568430	3,1	CRISPRCasFinder,PILER-CR	no	WYL	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	Unclear	GGCTGGAAACGGTCAACGGCAGCAT,TCACCGGCGGCGTGGAAACGGTCAACGGCAGCAT	25,34	0	0	NA	NA	NA:NA	5,2	5	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA,NA|136aa|down_4|NZ_CP020975.1_2574616_2575024_-,NA|192aa|down_7|NZ_CP020975.1_2577808_2578384_-,NA|124aa|down_8|NZ_CP020975.1_2578427_2578799_-	WYL|242aa|up_9|NZ_CP020975.1_2557582_2558308_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|122aa|up_8|NZ_CP020975.1_2558357_2558723_+	pfam07045, DUF1330, Domain of unknown function (DUF1330)	NA|376aa|up_7|NZ_CP020975.1_2558847_2559975_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|234aa|up_6|NZ_CP020975.1_2560160_2560862_-	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily	NA|447aa|up_5|NZ_CP020975.1_2561141_2562482_-	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|231aa|up_4|NZ_CP020975.1_2562705_2563398_+	pfam01694, Rhomboid, Rhomboid family	NA|107aa|up_3|NZ_CP020975.1_2563504_2563825_+	pfam08850, DUF1820, Domain of unknown function (DUF1820)	NA|336aa|up_2|NZ_CP020975.1_2563824_2564832_+	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases	NA|511aa|up_1|NZ_CP020975.1_2564979_2566512_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|412aa|up_0|NZ_CP020975.1_2566615_2567851_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|599aa|down_0|NZ_CP020975.1_2568829_2570626_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|148aa|down_1|NZ_CP020975.1_2570938_2571382_-	pfam13670, PepSY_2, Peptidase propeptide and YPEB domain	NA|378aa|down_2|NZ_CP020975.1_2571679_2572813_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|351aa|down_3|NZ_CP020975.1_2573434_2574487_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|136aa|down_4|NZ_CP020975.1_2574616_2575024_-	NA	NA|358aa|down_5|NZ_CP020975.1_2575261_2576335_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|353aa|down_6|NZ_CP020975.1_2576642_2577701_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|192aa|down_7|NZ_CP020975.1_2577808_2578384_-	NA	NA|124aa|down_8|NZ_CP020975.1_2578427_2578799_-	NA	NA|494aa|down_9|NZ_CP020975.1_2578795_2580277_-	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial
GCF_002759155.1_ASM275915v1	NZ_CP020977	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pC	1	29248-29354	1	CRISPRCasFinder	no			Orphan	GCGTTCAAGGTCCGTCCGTATTAC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA|96aa|up_8|NZ_CP020977.1_15917_16205_-,NA|107aa|up_0|NZ_CP020977.1_27399_27720_+,NA|91aa|down_0|NZ_CP020977.1_29654_29927_+,NA|84aa|down_3|NZ_CP020977.1_32807_33059_+,NA|92aa|down_5|NZ_CP020977.1_37044_37320_+,NA|171aa|down_8|NZ_CP020977.1_40447_40960_+	NA|363aa|up_9|NZ_CP020977.1_14316_15404_+	pfam00665, rve, Integrase core domain	NA|96aa|up_8|NZ_CP020977.1_15917_16205_-	NA	NA|363aa|up_7|NZ_CP020977.1_16376_17464_-	pfam00665, rve, Integrase core domain	NA|516aa|up_6|NZ_CP020977.1_19012_20560_+	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase	NA|185aa|up_5|NZ_CP020977.1_21674_22229_-	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein	NA|139aa|up_4|NZ_CP020977.1_22242_22659_-	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins	NA|85aa|up_3|NZ_CP020977.1_22655_22910_-	COG4691, StbC, Plasmid stability protein [General function prediction only]	NA|198aa|up_2|NZ_CP020977.1_23121_23715_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|1010aa|up_1|NZ_CP020977.1_23711_26741_+	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	NA|107aa|up_0|NZ_CP020977.1_27399_27720_+	NA	NA|91aa|down_0|NZ_CP020977.1_29654_29927_+	NA	NA|214aa|down_1|NZ_CP020977.1_30239_30881_+	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|190aa|down_2|NZ_CP020977.1_30893_31463_+	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]	NA|84aa|down_3|NZ_CP020977.1_32807_33059_+	NA	NA|1169aa|down_4|NZ_CP020977.1_33459_36966_+	pfam03377, TAL_effector, TAL effector repeat	NA|92aa|down_5|NZ_CP020977.1_37044_37320_+	NA	NA|363aa|down_6|NZ_CP020977.1_38111_39199_-	pfam00665, rve, Integrase core domain	NA|275aa|down_7|NZ_CP020977.1_39570_40395_+	pfam06067, DUF932, Domain of unknown function (DUF932)	NA|171aa|down_8|NZ_CP020977.1_40447_40960_+	NA	NA|74aa|down_9|NZ_CP020977.1_42403_42625_+	pfam10892, DUF2688, Protein of unknown function (DUF2688)
