assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002759115.1_ASM275911v1	NZ_CP020967	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 chromosome, complete genome	1	2272309-2272453	1	CRISPRCasFinder	no		DEDDh,cas3,WYL,csa3,DinG,PD-DExK	Orphan	GCGGGAGAAGGCAATCTCCGTCTGGGTTGAGGATCTGGCGGCC	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA|68aa|up_7|NZ_CP020967.1_2264357_2264561_+,NA|74aa|up_5|NZ_CP020967.1_2266482_2266704_+,NA	NA|91aa|up_9|NZ_CP020967.1_2263197_2263470_-	pfam14415, DUF4424, Domain of unknown function (DUF4424)	NA|197aa|up_8|NZ_CP020967.1_2263763_2264354_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|68aa|up_7|NZ_CP020967.1_2264357_2264561_+	NA	NA|541aa|up_6|NZ_CP020967.1_2264769_2266392_-	cd09002, GH43_XYL-like, Glycosyl hydrolase family 43, beta-D-xylosidase (uncharacterized)	NA|74aa|up_5|NZ_CP020967.1_2266482_2266704_+	NA	NA|337aa|up_4|NZ_CP020967.1_2266700_2267711_+	cd19161, AKR_AKR15A1, Microbacterium luteolum pyridoxal 4-dehydrogenase (PLD) and similar proteins	NA|291aa|up_3|NZ_CP020967.1_2267707_2268580_+	COG3618, COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|257aa|up_2|NZ_CP020967.1_2268576_2269347_+	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs	NA|286aa|up_1|NZ_CP020967.1_2269561_2270419_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|441aa|up_0|NZ_CP020967.1_2270942_2272265_+	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA	NA|120aa|down_0|NZ_CP020967.1_2272709_2273069_-	pfam05336, rhaM, L-rhamnose mutarotase	NA|434aa|down_1|NZ_CP020967.1_2273071_2274373_-	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|250aa|down_2|NZ_CP020967.1_2274553_2275303_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|376aa|down_3|NZ_CP020967.1_2275428_2276556_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|496aa|down_4|NZ_CP020967.1_2276708_2278196_+	pfam03572, Peptidase_S41, Peptidase family S41	NA|195aa|down_5|NZ_CP020967.1_2278449_2279034_+	COG1971, COG1971, Predicted membrane protein [Function unknown]	NA|1150aa|down_6|NZ_CP020967.1_2279199_2282649_-	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain	NA|881aa|down_7|NZ_CP020967.1_2283336_2285979_+	pfam15979, Glyco_hydro_115, Glycosyl hydrolase family 115	NA|785aa|down_8|NZ_CP020967.1_2286072_2288427_-	cd11748, GH94N_NdvB_like, Glycoside hydrolase family 94 N-terminal-like domain of NdvB-like proteins	NA|461aa|down_9|NZ_CP020967.1_2288474_2289857_-	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily
GCF_002759115.1_ASM275911v1	NZ_CP020967	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 chromosome, complete genome	2	2581333-2581458	2	CRISPRCasFinder	no		DEDDh,cas3,WYL,csa3,DinG,PD-DExK	Orphan	CCCTCTCCCGCAAGCGGGAGAGGGAAAGCGTCT	33	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA|173aa|up_5|NZ_CP020967.1_2573026_2573545_-,NA|90aa|up_4|NZ_CP020967.1_2573972_2574242_-,NA|111aa|up_3|NZ_CP020967.1_2574537_2574870_+,NA|96aa|down_6|NZ_CP020967.1_2597658_2597946_-	NA|159aa|up_9|NZ_CP020967.1_2570034_2570511_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|190aa|up_8|NZ_CP020967.1_2570574_2571144_-	PRK11640, PRK11640, putative transcriptional regulator; Provisional	NA|191aa|up_7|NZ_CP020967.1_2571260_2571833_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|248aa|up_6|NZ_CP020967.1_2571917_2572661_+	PRK06500, PRK06500, SDR family oxidoreductase	NA|173aa|up_5|NZ_CP020967.1_2573026_2573545_-	NA	NA|90aa|up_4|NZ_CP020967.1_2573972_2574242_-	NA	NA|111aa|up_3|NZ_CP020967.1_2574537_2574870_+	NA	NA|642aa|up_2|NZ_CP020967.1_2575184_2577110_+	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|463aa|up_1|NZ_CP020967.1_2577459_2578848_-	cd02652, nuc_hydro_2, NH_2: A subgroup of nucleoside hydrolases	NA|97aa|up_0|NZ_CP020967.1_2579202_2579493_-	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|1329aa|down_0|NZ_CP020967.1_2582583_2586570_-	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|1135aa|down_1|NZ_CP020967.1_2586566_2589971_-	TIGR01450, recC, exodeoxyribonuclease V, gamma subunit	NA|1592aa|down_2|NZ_CP020967.1_2590323_2595099_-	pfam03797, Autotransporter, Autotransporter beta-domain	NA|184aa|down_3|NZ_CP020967.1_2595360_2595912_+	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|176aa|down_4|NZ_CP020967.1_2595959_2596487_+	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|183aa|down_5|NZ_CP020967.1_2597091_2597640_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|96aa|down_6|NZ_CP020967.1_2597658_2597946_-	NA	NA|265aa|down_7|NZ_CP020967.1_2598327_2599122_+	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|250aa|down_8|NZ_CP020967.1_2599121_2599871_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|182aa|down_9|NZ_CP020967.1_2599882_2600428_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD
GCF_002759115.1_ASM275911v1	NZ_CP020967	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 chromosome, complete genome	3	2670781-2671081	3,1	CRISPRCasFinder,PILER-CR	no	WYL	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	Unclear	GGCTGGAAACGGTCAACGGCAGCAT,TCACCGGCGGCGTGGAAACGGTCAACGGCAGCAT	25,34	0	0	NA	NA	NA:NA	5,2	5	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA,NA|136aa|down_4|NZ_CP020967.1_2677267_2677675_-,NA|192aa|down_7|NZ_CP020967.1_2680459_2681035_-,NA|124aa|down_8|NZ_CP020967.1_2681078_2681450_-	WYL|242aa|up_9|NZ_CP020967.1_2660235_2660961_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|122aa|up_8|NZ_CP020967.1_2661010_2661376_+	pfam07045, DUF1330, Domain of unknown function (DUF1330)	NA|376aa|up_7|NZ_CP020967.1_2661500_2662628_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|234aa|up_6|NZ_CP020967.1_2662813_2663515_-	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily	NA|447aa|up_5|NZ_CP020967.1_2663794_2665135_-	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|231aa|up_4|NZ_CP020967.1_2665356_2666049_+	pfam01694, Rhomboid, Rhomboid family	NA|107aa|up_3|NZ_CP020967.1_2666155_2666476_+	pfam08850, DUF1820, Domain of unknown function (DUF1820)	NA|336aa|up_2|NZ_CP020967.1_2666475_2667483_+	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases	NA|511aa|up_1|NZ_CP020967.1_2667630_2669163_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|412aa|up_0|NZ_CP020967.1_2669266_2670502_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|599aa|down_0|NZ_CP020967.1_2671480_2673277_+	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|148aa|down_1|NZ_CP020967.1_2673589_2674033_-	pfam13670, PepSY_2, Peptidase propeptide and YPEB domain	NA|378aa|down_2|NZ_CP020967.1_2674330_2675464_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|351aa|down_3|NZ_CP020967.1_2676085_2677138_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|136aa|down_4|NZ_CP020967.1_2677267_2677675_-	NA	NA|358aa|down_5|NZ_CP020967.1_2677912_2678986_-	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|353aa|down_6|NZ_CP020967.1_2679293_2680352_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|192aa|down_7|NZ_CP020967.1_2680459_2681035_-	NA	NA|124aa|down_8|NZ_CP020967.1_2681078_2681450_-	NA	NA|494aa|down_9|NZ_CP020967.1_2681446_2682928_-	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial
GCF_002759115.1_ASM275911v1	NZ_CP020969	Xanthomonas phaseoli pv. phaseoli strain CFBP6164 plasmid pC, complete sequence	1	10983-11089	1	CRISPRCasFinder	no			Orphan	TAGTAATACGGACGGACCTTGAAC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,csa3,DinG,PD-DExK	NA|92aa|up_5|NZ_CP020969.1_3011_3287_-,NA|84aa|up_3|NZ_CP020969.1_7279_7531_-,NA|91aa|up_0|NZ_CP020969.1_10411_10684_-,NA|107aa|down_0|NZ_CP020969.1_12618_12939_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|363aa|up_6|NZ_CP020969.1_1130_2218_+	pfam00665, rve, Integrase core domain	NA|92aa|up_5|NZ_CP020969.1_3011_3287_-	NA	NA|1169aa|up_4|NZ_CP020969.1_3365_6872_-	pfam03377, TAL_effector, TAL effector repeat	NA|84aa|up_3|NZ_CP020969.1_7279_7531_-	NA	NA|190aa|up_2|NZ_CP020969.1_8875_9445_-	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]	NA|214aa|up_1|NZ_CP020969.1_9457_10099_-	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|91aa|up_0|NZ_CP020969.1_10411_10684_-	NA	NA|107aa|down_0|NZ_CP020969.1_12618_12939_-	NA	NA|1010aa|down_1|NZ_CP020969.1_13598_16628_-	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	NA|198aa|down_2|NZ_CP020969.1_16624_17218_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|85aa|down_3|NZ_CP020969.1_17429_17684_+	COG4691, StbC, Plasmid stability protein [General function prediction only]	NA|139aa|down_4|NZ_CP020969.1_17680_18097_+	cd18731, PIN_NgFitB-like, VapC-like PIN domain of Neisseria gonorrhoeae FitB and related proteins	NA|185aa|down_5|NZ_CP020969.1_18110_18665_+	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein	NA|516aa|down_6|NZ_CP020969.1_20012_21560_-	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase	NA|89aa|down_7|NZ_CP020969.1_23109_23376_+	pfam01527, HTH_Tnp_1, Transposase	NA|108aa|down_8|NZ_CP020969.1_23396_23720_+	pfam13276, HTH_21, HTH-like domain	NA|363aa|down_9|NZ_CP020969.1_23784_24872_+	pfam00665, rve, Integrase core domain
