assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	1	653985-654124	1	CRISPRCasFinder	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	GGCCTACGGCTCGGTTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	53	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA,NA	NA|950aa|up_9|NZ_CP024223.1_631040_633890_-	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC	NA|259aa|up_8|NZ_CP024223.1_634164_634941_-	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|up_7|NZ_CP024223.1_634945_636595_-	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|1465aa|up_6|NZ_CP024223.1_636595_640990_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|208aa|up_5|NZ_CP024223.1_641133_641757_-	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|563aa|up_4|NZ_CP024223.1_641753_643442_-	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|876aa|up_3|NZ_CP024223.1_643590_646218_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|241aa|up_2|NZ_CP024223.1_646364_647087_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|1251aa|up_1|NZ_CP024223.1_647214_650967_-	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|762aa|up_0|NZ_CP024223.1_651662_653948_+	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|377aa|down_0|NZ_CP024223.1_654180_655311_+	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|85aa|down_1|NZ_CP024223.1_655310_655565_+	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|217aa|down_2|NZ_CP024223.1_655618_656269_-	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|397aa|down_3|NZ_CP024223.1_656349_657540_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|293aa|down_4|NZ_CP024223.1_657704_658583_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|360aa|down_5|NZ_CP024223.1_658627_659707_-	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|453aa|down_6|NZ_CP024223.1_659711_661070_-	PRK11273, glpT, glycerol-3-phosphate transporter	NA|543aa|down_7|NZ_CP024223.1_661342_662971_+	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|420aa|down_8|NZ_CP024223.1_662960_664220_+	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|397aa|down_9|NZ_CP024223.1_664216_665407_+	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	2	735084-735227	2	CRISPRCasFinder	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	TGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAG	53	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA,NA	NA|298aa|up_9|NZ_CP024223.1_725863_726757_+	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|297aa|up_8|NZ_CP024223.1_726804_727695_-	PRK09857, PRK09857, recombination-promoting nuclease RpnA	NA|258aa|up_7|NZ_CP024223.1_727891_728665_-	PRK10619, PRK10619, histidine ABC transporter ATP-binding protein HisP	NA|239aa|up_6|NZ_CP024223.1_728672_729389_-	PRK15069, PRK15069, histidine ABC transporter permease HisM	NA|229aa|up_5|NZ_CP024223.1_729385_730072_-	PRK15135, PRK15135, histidine ABC transporter permease HisQ	NA|261aa|up_4|NZ_CP024223.1_730161_730944_-	PRK15437, PRK15437, histidine ABC transporter substrate-binding protein HisJ; Provisional	NA|261aa|up_3|NZ_CP024223.1_731164_731947_-	PRK15010, PRK15010, lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT	NA|190aa|up_2|NZ_CP024223.1_732212_732782_-	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|506aa|up_1|NZ_CP024223.1_732876_734394_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|163aa|up_0|NZ_CP024223.1_734430_734919_-	PRK10845, PRK10845, colicin V production protein; Provisional	NA|221aa|down_0|NZ_CP024223.1_735233_735896_-	PRK11633, PRK11633, cell division protein DedD; Provisional	NA|423aa|down_1|NZ_CP024223.1_735885_737154_-	PRK10846, PRK10846, bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional	NA|305aa|down_2|NZ_CP024223.1_737223_738138_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|220aa|down_3|NZ_CP024223.1_738293_738953_-	PRK10847, PRK10847, DedA family protein	NA|271aa|down_4|NZ_CP024223.1_739035_739848_-	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|338aa|down_5|NZ_CP024223.1_739847_740861_-	PRK08040, PRK08040, putative semialdehyde dehydrogenase; Provisional	NA|379aa|down_6|NZ_CP024223.1_740926_742063_-	PRK15438, PRK15438, erythronate-4-phosphate dehydrogenase PdxB; Provisional	NA|332aa|down_7|NZ_CP024223.1_742161_743157_+	PRK10715, flk, flagella biosynthesis regulator Flk	NA|393aa|down_8|NZ_CP024223.1_743153_744332_-	PRK12382, PRK12382, putative transporter; Provisional	NA|407aa|down_9|NZ_CP024223.1_744615_745836_-	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	3	957496-957617	3	CRISPRCasFinder	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	GGTTCTGTACACTGTAGGCCTGATAAGACGC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA,NA	NA|259aa|up_9|NZ_CP024223.1_949428_950205_-	PRK11611, PRK11611, enhanced serine sensitivity protein SseB; Provisional	NA|428aa|up_8|NZ_CP024223.1_950346_951630_-	PRK05015, PRK05015, aminopeptidase B; Provisional	NA|67aa|up_7|NZ_CP024223.1_951688_951889_-	PRK10721, PRK10721, hypothetical protein; Provisional	NA|112aa|up_6|NZ_CP024223.1_951900_952236_-	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system	NA|617aa|up_5|NZ_CP024223.1_952237_954088_-	PRK05183, hscA, chaperone protein HscA; Provisional	NA|172aa|up_4|NZ_CP024223.1_954104_954620_-	PRK05014, hscB, co-chaperone HscB; Provisional	NA|108aa|up_3|NZ_CP024223.1_954715_955039_-	PRK09502, iscA, iron-sulfur cluster assembly protein IscA	NA|129aa|up_2|NZ_CP024223.1_955055_955442_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_1|NZ_CP024223.1_955469_956684_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|163aa|up_0|NZ_CP024223.1_956795_957284_-	PRK10857, PRK10857, Fe-S cluster assembly transcriptional regulator IscR	NA|247aa|down_0|NZ_CP024223.1_957644_958385_-	PRK15114, PRK15114, tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ; Provisional	NA|268aa|down_1|NZ_CP024223.1_958503_959307_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|285aa|down_2|NZ_CP024223.1_959451_960306_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|427aa|down_3|NZ_CP024223.1_960496_961777_+	PRK11564, PRK11564, stationary phase inducible protein CsiE; Provisional	NA|380aa|down_4|NZ_CP024223.1_961768_962908_-	PRK11128, PRK11128, 3-phenylpropionate MFS transporter	NA|297aa|down_5|NZ_CP024223.1_963067_963958_-	PRK09906, PRK09906, DNA-binding transcriptional regulator HcaR; Provisional	NA|454aa|down_6|NZ_CP024223.1_964093_965455_+	cd08881, RHO_alpha_C_NDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of naphthalene 1,2-dioxygenase (NDO) and related aromatic ring hydroxylating dioxygenases	NA|173aa|down_7|NZ_CP024223.1_965451_965970_+	PRK10069, PRK10069, 3-phenylpropionate/cinnamic acid dioxygenase subunit beta	NA|107aa|down_8|NZ_CP024223.1_965969_966290_+	PRK09965, PRK09965, 3-phenylpropionate dioxygenase ferredoxin subunit; Provisional	NA|271aa|down_9|NZ_CP024223.1_966286_967099_+	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	4	1177665-1177998	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA,NA	NA|254aa|up_9|NZ_CP024223.1_1169477_1170239_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP024223.1_1170219_1171269_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP024223.1_1171265_1171745_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP024223.1_1171744_1172455_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP024223.1_1172473_1172785_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP024223.1_1172978_1173302_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP024223.1_1173351_1173957_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP024223.1_1173956_1175384_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP024223.1_1175385_1176294_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP024223.1_1176545_1177583_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|371aa|down_0|NZ_CP024223.1_1180397_1181510_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|51aa|down_1|NZ_CP024223.1_1181586_1181739_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_2|NZ_CP024223.1_1182003_1182738_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_3|NZ_CP024223.1_1182811_1184524_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|down_4|NZ_CP024223.1_1184523_1186323_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|122aa|down_5|NZ_CP024223.1_1186638_1187004_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|424aa|down_6|NZ_CP024223.1_1187081_1188353_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|down_7|NZ_CP024223.1_1188343_1188604_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|down_8|NZ_CP024223.1_1188620_1189196_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|down_9|NZ_CP024223.1_1189342_1190203_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	5	1198432-1199192	5,2,2	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	12,12,12	12	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA,NA	NA|122aa|up_9|NZ_CP024223.1_1186638_1187004_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|424aa|up_8|NZ_CP024223.1_1187081_1188353_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_7|NZ_CP024223.1_1188343_1188604_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_6|NZ_CP024223.1_1188620_1189196_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_5|NZ_CP024223.1_1189342_1190203_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_4|NZ_CP024223.1_1190199_1190979_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_3|NZ_CP024223.1_1190956_1192294_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|262aa|up_2|NZ_CP024223.1_1193907_1194693_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP024223.1_1195011_1196289_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP024223.1_1196315_1197794_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP024223.1_1199531_1200203_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|291aa|down_1|NZ_CP024223.1_1200495_1201368_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_2|NZ_CP024223.1_1201427_1202726_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_CP024223.1_1202813_1204451_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_CP024223.1_1204678_1205470_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|745aa|down_5|NZ_CP024223.1_1205565_1207800_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_6|NZ_CP024223.1_1207847_1209149_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_7|NZ_CP024223.1_1209205_1211962_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|447aa|down_8|NZ_CP024223.1_1212194_1213535_-	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|447aa|down_9|NZ_CP024223.1_1213555_1214896_-	TIGR03247, glucar-dehydr, glucarate dehydratase
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	6	1584449-1584550	6	CRISPRCasFinder	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	TACAAAACACAACAACATCAACAA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA|55aa|up_0|NZ_CP024223.1_1584243_1584408_+,NA	NA|102aa|up_9|NZ_CP024223.1_1578586_1578892_+	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]	NA|135aa|up_8|NZ_CP024223.1_1578894_1579299_+	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|100aa|up_7|NZ_CP024223.1_1579288_1579588_+	pfam13997, YqjK, YqjK-like protein	NA|161aa|up_6|NZ_CP024223.1_1579683_1580166_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|329aa|up_5|NZ_CP024223.1_1580235_1581222_+	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|122aa|up_4|NZ_CP024223.1_1581504_1581870_+	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|119aa|up_3|NZ_CP024223.1_1582111_1582468_+	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|299aa|up_2|NZ_CP024223.1_1582518_1583415_-	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|234aa|up_1|NZ_CP024223.1_1583519_1584221_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|55aa|up_0|NZ_CP024223.1_1584243_1584408_+	NA	NA|437aa|down_0|NZ_CP024223.1_1584619_1585930_-	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|444aa|down_1|NZ_CP024223.1_1585957_1587289_-	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|455aa|down_2|NZ_CP024223.1_1587563_1588928_-	PRK15040, PRK15040, L-serine ammonia-lyase	NA|130aa|down_3|NZ_CP024223.1_1588999_1589389_-	PRK11401, PRK11401, enamine/imine deaminase	NA|765aa|down_4|NZ_CP024223.1_1589402_1591697_-	cd01678, PFL1, Pyruvate formate lyase 1	NA|403aa|down_5|NZ_CP024223.1_1592116_1593325_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|444aa|down_6|NZ_CP024223.1_1594302_1595634_-	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|330aa|down_7|NZ_CP024223.1_1595655_1596645_-	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|313aa|down_8|NZ_CP024223.1_1596743_1597682_-	PRK10341, PRK10341, transcriptional regulator TdcA	NA|115aa|down_9|NZ_CP024223.1_1597870_1598215_+	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	7	2944588-2944737	7	CRISPRCasFinder	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	CGCGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	54	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA|597aa|up_6|NZ_CP024223.1_2935698_2937489_+,NA|679aa|down_5|NZ_CP024223.1_2952515_2954552_+	NA|238aa|up_9|NZ_CP024223.1_2933601_2934315_-	PRK12742, PRK12742, SDR family oxidoreductase	NA|198aa|up_8|NZ_CP024223.1_2934385_2934979_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|151aa|up_7|NZ_CP024223.1_2935123_2935576_+	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|597aa|up_6|NZ_CP024223.1_2935698_2937489_+	NA	NA|335aa|up_5|NZ_CP024223.1_2937545_2938550_-	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|139aa|up_4|NZ_CP024223.1_2938711_2939128_+	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|168aa|up_3|NZ_CP024223.1_2939173_2939677_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|399aa|up_2|NZ_CP024223.1_2939869_2941066_+	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|952aa|up_1|NZ_CP024223.1_2941121_2943977_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|148aa|up_0|NZ_CP024223.1_2943976_2944420_-	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|504aa|down_0|NZ_CP024223.1_2944773_2946285_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|367aa|down_1|NZ_CP024223.1_2946551_2947652_+	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|361aa|down_2|NZ_CP024223.1_2947651_2948734_+	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|501aa|down_3|NZ_CP024223.1_2948894_2950397_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|340aa|down_4|NZ_CP024223.1_2950526_2951546_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|679aa|down_5|NZ_CP024223.1_2952515_2954552_+	NA	NA|60aa|down_6|NZ_CP024223.1_2954956_2955136_-	COG4930, COG4930, Predicted ATP-dependent Lon-type protease [Posttranslational modification, protein turnover, chaperones]	NA|291aa|down_7|NZ_CP024223.1_2955180_2956053_-	COG3440, COG3440, Predicted restriction endonuclease [Defense mechanisms]	NA|41aa|down_8|NZ_CP024223.1_2956134_2956257_+	COG3183, COG3183, Predicted restriction endonuclease [Defense mechanisms]	NA|327aa|down_9|NZ_CP024223.1_2956264_2957245_-	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase
GCF_002741435.1_ASM274143v1	NZ_CP024223	Escherichia coli O169:H41 strain 2014EL-1345-2 chromosome, complete genome	8	3147745-3147860	8	CRISPRCasFinder	no		DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	Orphan	GATAAGACGCGCCAGCGTCGCATCAGGCGTT	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas14j,cas3,csa3,c2c9_V-U4,WYL	NA,NA|190aa|down_7|NZ_CP024223.1_3156896_3157466_+	NA|126aa|up_9|NZ_CP024223.1_3133750_3134128_-	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|274aa|up_8|NZ_CP024223.1_3134130_3134952_-	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|330aa|up_7|NZ_CP024223.1_3134948_3135938_-	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|429aa|up_6|NZ_CP024223.1_3135937_3137224_-	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|785aa|up_5|NZ_CP024223.1_3137276_3139631_-	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|272aa|up_4|NZ_CP024223.1_3139885_3140701_+	PRK09430, djlA, co-chaperone DjlA	NA|220aa|up_3|NZ_CP024223.1_3140817_3141477_-	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|969aa|up_2|NZ_CP024223.1_3141488_3144395_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|784aa|up_1|NZ_CP024223.1_3144558_3146910_-	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|232aa|up_0|NZ_CP024223.1_3146984_3147680_-	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|501aa|down_0|NZ_CP024223.1_3147879_3149382_-	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|567aa|down_1|NZ_CP024223.1_3149392_3151093_-	PRK04123, PRK04123, ribulokinase; Provisional	NA|293aa|down_2|NZ_CP024223.1_3151431_3152310_+	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|255aa|down_3|NZ_CP024223.1_3152395_3153160_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|233aa|down_4|NZ_CP024223.1_3153273_3153972_-	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|537aa|down_5|NZ_CP024223.1_3153955_3155566_-	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|328aa|down_6|NZ_CP024223.1_3155541_3156525_-	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|190aa|down_7|NZ_CP024223.1_3156896_3157466_+	NA	NA|553aa|down_8|NZ_CP024223.1_3157694_3159353_-	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|44aa|down_9|NZ_CP024223.1_3159441_3159573_+	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT
