The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	35501	41839	2247350		Synechococcus_phage(33.33%)	6	NA	NA
WP_009908857.1|35501_36956_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	9.4e-58
WP_009908859.1|37011_38034_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	41.1	3.0e-58
WP_009908860.1|38030_38582_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.5	2.1e-26
WP_002935323.1|38591_40139_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.0	8.5e-73
WP_002935322.1|40203_41034_+	DNA adenine methylase	NA	A0A1S5PRR3	Streptococcus_phage	59.3	7.7e-89
WP_032499218.1|41023_41839_+	site-specific DNA-methyltransferase	NA	A0A1W6JJW1	Lactococcus_phage	33.5	1.1e-26
>prophage 2
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	325144	394396	2247350	tRNA,protease,holin,transposase	Streptococcus_phage(27.27%)	58	NA	NA
WP_002937468.1|325144_325894_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_002937466.1|325883_326645_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_002937464.1|326634_327120_+	membrane protein	NA	NA	NA	NA	NA
WP_099425908.1|327100_327667_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_002937456.1|327666_328281_+	DUF1349 domain-containing protein	NA	NA	NA	NA	NA
WP_002937454.1|328553_328985_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_002937449.1|329064_330066_+	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002937445.1|330091_330937_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002937439.1|330929_331799_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002937437.1|331791_333003_+	NADH:flavin oxidoreductase/NADH oxidase family protein	NA	NA	NA	NA	NA
WP_074394221.1|333269_333788_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002937435.1|333921_335040_+	pectin acetylesterase	NA	NA	NA	NA	NA
WP_013730135.1|335049_336069_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002937432.1|336290_337574_+	trigger factor	NA	NA	NA	NA	NA
WP_002937351.1|338618_339539_+	zinc ABC transporter solute-binding protein	NA	NA	NA	NA	NA
WP_002937350.1|339572_342728_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA	NA
WP_099425909.1|342808_344159_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	9.7e-65
WP_011921912.1|345258_345840_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_009909339.1|346032_347637_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	46.6	4.4e-141
WP_024409215.1|348248_349130_+	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_001140948.1|349524_349713_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_099425910.1|355801_357820_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_053338568.1|357992_359297_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	72.5	2.9e-167
WP_014636805.1|359361_360321_-	asparaginase	NA	NA	NA	NA	NA
WP_004194297.1|360390_361236_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_004194296.1|361237_361756_+	haloacid dehalogenase	NA	A0A0H3UZF4	Geobacillus_virus	35.5	8.9e-19
WP_004194294.1|361771_362224_-	universal stress protein	NA	NA	NA	NA	NA
WP_002937606.1|362378_363593_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_013730143.1|364063_364852_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_024376330.1|364853_365405_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	38.7	9.5e-27
WP_099425911.1|365687_366890_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	94.2	2.2e-214
WP_011921928.1|367447_367795_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_013730145.1|367976_368651_+	hydrolase	NA	NA	NA	NA	NA
WP_002939046.1|368868_369171_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_002939044.1|369170_370637_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_002939042.1|370636_372076_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_074390696.1|372393_372549_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_002939037.1|372851_373850_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	25.7	5.0e-10
WP_002939036.1|373982_375155_+	galactokinase	NA	NA	NA	NA	NA
WP_009909376.1|375164_376646_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002939032.1|376720_377629_+	EamA family transporter	NA	NA	NA	NA	NA
WP_009909358.1|377816_379019_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	97.5	4.2e-221
WP_002935152.1|379301_379931_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_002935151.1|380137_380512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002935150.1|380695_381223_+	YqeG family HAD IIIA-type phosphatase	NA	NA	NA	NA	NA
WP_011922650.1|381223_382330_+	ribosome biogenesis GTPase YqeH	NA	NA	NA	NA	NA
WP_024379048.1|382648_382960_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA	NA
WP_002935147.1|382972_383605_+	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	33.8	2.0e-20
WP_002935146.1|383601_384189_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002935141.1|384643_385153_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002935140.1|385154_385514_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_009909388.1|385970_386717_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_099425968.1|386729_388499_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002935136.1|388542_389631_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_002935135.1|389632_390013_+	TipAS antibiotic-recognition domain-containing protein	NA	NA	NA	NA	NA
WP_013730152.1|390072_391452_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004194216.1|391471_391882_+	peptide deformylase	NA	A0A2I7QLT9	Vibrio_phage	34.2	2.1e-10
WP_013730153.1|392296_394396_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.1	7.4e-120
>prophage 3
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	434132	470008	2247350	transposase,integrase,portal	Streptococcus_phage(97.62%)	43	434309:434323	442685:442699
WP_002937018.1|434132_435533_+	Cof-type HAD-IIB family hydrolase	NA	A0A1V0S9I2	Catovirus	43.5	2.3e-24
434309:434323	attL	TTTGGTGCCAGAAAT	NA	NA	NA	NA
WP_002937017.1|435534_435906_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002937015.1|435932_436859_-	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	100.0	9.9e-170
WP_024409220.1|437088_438246_-|integrase	site-specific integrase	integrase	A0A1X9I5C3	Streptococcus_phage	100.0	2.2e-219
WP_013730164.1|438442_439174_-	hypothetical protein	NA	A0A1X9I5E4	Streptococcus_phage	100.0	3.7e-103
WP_013730165.1|439221_439605_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1X9I5R2	Streptococcus_phage	100.0	2.9e-67
WP_002937004.1|439611_439992_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5A1	Streptococcus_phage	100.0	3.9e-64
WP_002937001.1|440176_440377_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I583	Streptococcus_phage	100.0	9.6e-30
WP_013730166.1|440446_440773_+	hypothetical protein	NA	A0A1X9I594	Streptococcus_phage	100.0	8.0e-58
WP_013730167.1|440846_441101_+	hypothetical protein	NA	A0A1X9I581	Streptococcus_phage	100.0	9.7e-43
WP_013730168.1|441141_441390_+	hypothetical protein	NA	A0A1X9I6Q0	Streptococcus_phage	100.0	1.1e-38
WP_022540561.1|441379_441532_+	hypothetical protein	NA	A0A1X9I663	Streptococcus_phage	100.0	2.0e-19
WP_013730169.1|441536_441878_+	hypothetical protein	NA	A0A1X9I5G6	Streptococcus_phage	100.0	2.1e-56
WP_013730170.1|441877_442357_+	siphovirus Gp157 family protein	NA	A0A1X9I5D2	Streptococcus_phage	100.0	4.8e-67
WP_013730171.1|442353_442599_+	hypothetical protein	NA	A0A1X9I5F0	Streptococcus_phage	100.0	4.3e-40
WP_013730172.1|442579_443044_+	hypothetical protein	NA	A0A1X9I5S7	Streptococcus_phage	100.0	7.1e-84
442685:442699	attR	TTTGGTGCCAGAAAT	NA	NA	NA	NA
WP_099425969.1|443246_444185_+	hypothetical protein	NA	A0A1X9I5A6	Streptococcus_phage	100.0	1.4e-182
WP_013730175.1|444534_445233_+	ERF family protein	NA	A0A1X9I5A9	Streptococcus_phage	100.0	2.2e-113
WP_022540564.1|445232_445529_+	hypothetical protein	NA	A0A1X9I5B1	Streptococcus_phage	100.0	1.6e-52
WP_022540565.1|445525_445924_+	single-stranded DNA-binding protein	NA	A0A1X9I6R5	Streptococcus_phage	100.0	2.7e-68
WP_013730177.1|445934_446762_+	replication protein	NA	A0A1X9I684	Streptococcus_phage	100.0	4.6e-158
WP_079253058.1|446745_448125_+	helicase	NA	A0A1X9I5H6	Streptococcus_phage	99.8	3.8e-266
WP_013730180.1|448633_448942_+	DUF1372 family protein	NA	A0A1X9I5G5	Streptococcus_phage	100.0	3.8e-49
WP_013730181.1|448943_449159_+	hypothetical protein	NA	A0A1X9I5W1	Streptococcus_phage	100.0	9.7e-36
WP_013730182.1|449347_449662_+	hypothetical protein	NA	A0A1X9I5C1	Streptococcus_phage	100.0	5.2e-54
WP_002937915.1|449734_450169_+	DUF1492 domain-containing protein	NA	A0A1X9I5B5	Streptococcus_phage	100.0	2.0e-72
WP_013730183.1|450265_450613_+	HNH endonuclease	NA	A0A1X9I5C9	Streptococcus_phage	100.0	1.3e-61
WP_029694150.1|450694_451063_+	hypothetical protein	NA	A0A1X9I6S2	Streptococcus_phage	100.0	1.3e-40
WP_013730185.1|451059_452325_+|portal	phage portal protein	portal	A0A1X9I693	Streptococcus_phage	100.0	5.4e-243
WP_022540567.1|453542_453776_+	hypothetical protein	NA	A0A1X9I5G0	Streptococcus_phage	100.0	1.6e-39
WP_079714049.1|453977_455180_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	93.8	4.2e-213
WP_009909540.1|456894_457533_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	100.0	4.6e-126
WP_009909541.1|457640_460109_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	100.0	0.0e+00
WP_013730270.1|460270_461347_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	100.0	2.1e-195
WP_009909544.1|461411_462650_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	100.0	1.2e-223
WP_009909545.1|462659_463445_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	100.0	1.6e-136
WP_013730271.1|463467_463872_-	TetR/AcrR family transcriptional regulator	NA	A0A1X9I6A2	Streptococcus_phage	100.0	1.1e-64
WP_013730272.1|463998_464850_+	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	100.0	6.3e-155
WP_024409272.1|464948_466208_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	100.0	7.0e-243
WP_012775019.1|466329_467064_+	peroxide stress protein YaaA	NA	A0A1X9I5I0	Streptococcus_phage	99.5	1.5e-120
WP_024409273.1|467168_468614_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	99.8	1.6e-227
WP_011922111.1|468631_469321_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	96.1	1.3e-110
WP_009909562.1|469330_470008_+	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	100.0	1.6e-121
>prophage 4
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	548595	564372	2247350	transposase	Streptococcus_phage(100.0%)	18	NA	NA
WP_009909666.1|548595_550833_+	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	94.0	1.4e-97
WP_002935351.1|550834_550978_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_002935353.1|551156_551813_+	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	99.1	2.1e-113
WP_002935354.1|551906_552734_+	hypothetical protein	NA	M1PFV6	Streptococcus_phage	97.8	6.6e-133
WP_002935355.1|552739_554011_+	hypothetical protein	NA	M1PLC8	Streptococcus_phage	100.0	1.7e-212
WP_002935357.1|554047_554914_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	99.7	4.6e-153
WP_002935358.1|555088_555727_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	98.6	2.6e-113
WP_002935359.1|555723_556608_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	98.3	3.6e-153
WP_002935361.1|556627_556945_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	100.0	3.1e-54
WP_002935362.1|556946_557810_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	99.7	2.1e-158
WP_002935363.1|558279_559371_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	98.6	1.5e-204
WP_002935364.1|559370_559928_+	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	98.4	4.5e-93
WP_002935365.1|560301_561483_+	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	99.7	2.7e-220
WP_002935366.1|561485_561992_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	97.0	1.2e-92
WP_002935368.1|561975_562329_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	100.0	1.9e-60
WP_009909675.1|562345_563245_-	cation transporter	NA	M1Q1N9	Streptococcus_phage	98.3	1.3e-161
WP_013730326.1|563426_563525_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002935370.1|563544_564372_-	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	99.6	8.3e-152
>prophage 5
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	845358	879956	2247350	capsid,terminase,transposase,protease,holin	Streptococcus_phage(93.1%)	35	NA	NA
WP_004194720.1|845358_846522_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	64.7	2.1e-140
WP_004194719.1|846518_847193_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	64.6	7.7e-79
WP_004194717.1|847196_848363_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	34.9	3.5e-39
WP_013730266.1|848370_849474_+	prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_002938966.1|849483_849822_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	100.0	1.9e-54
WP_002935153.1|850124_851327_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	93.8	3.2e-213
WP_024390460.1|851601_851856_+	hypothetical protein	NA	A0A1X9I5Y1	Streptococcus_phage	100.0	1.2e-40
WP_024390459.1|851855_852086_+	hypothetical protein	NA	A0A1X9I6E9	Streptococcus_phage	100.0	4.8e-33
WP_024409245.1|852169_853585_+|terminase	terminase	terminase	A0A1X9I637	Streptococcus_phage	100.0	1.2e-267
WP_024409244.1|853665_854130_+	DUF4355 domain-containing protein	NA	A0A1X9I604	Streptococcus_phage	100.0	5.5e-76
WP_024390456.1|854133_855024_+|capsid	phage major capsid protein	capsid	M1PF50	Streptococcus_phage	100.0	6.8e-168
WP_024409243.1|855025_855244_+	hypothetical protein	NA	A0A1X9I6Q1	Streptococcus_phage	100.0	8.6e-32
WP_024409242.1|855247_855643_+	hypothetical protein	NA	A0A1X9I730	Streptococcus_phage	100.0	3.7e-65
WP_024409241.1|855629_855968_+	hypothetical protein	NA	A0A1X9I5Z3	Streptococcus_phage	100.0	4.7e-61
WP_024409240.1|855960_856200_+	hypothetical protein	NA	A0A1X9I5Y4	Streptococcus_phage	100.0	4.8e-36
WP_024409239.1|856196_856532_+	hypothetical protein	NA	A0A1X9I5X7	Streptococcus_phage	100.0	6.5e-55
WP_024409238.1|856547_857135_+	hypothetical protein	NA	A0A1X9I5X2	Streptococcus_phage	100.0	3.3e-102
WP_024415622.1|857145_857424_+	hypothetical protein	NA	M1Q1D2	Streptococcus_phage	100.0	3.6e-43
WP_044666863.1|857420_857804_+	DUF5361 domain-containing protein	NA	M1PS20	Streptococcus_phage	100.0	3.6e-65
WP_002937855.1|857793_860376_+	hypothetical protein	NA	M1NRZ6	Streptococcus_phage	100.0	6.2e-262
WP_002937853.1|860375_861071_+	adenylosuccinate synthetase	NA	M1PFK1	Streptococcus_phage	100.0	5.8e-130
WP_024409235.1|861067_866374_+	hypothetical protein	NA	A0A1X9I6P1	Streptococcus_phage	100.0	0.0e+00
WP_024409234.1|866373_866589_+	hypothetical protein	NA	A0A1X9I729	Streptococcus_phage	100.0	4.3e-28
WP_024409233.1|866591_866936_+	hypothetical protein	NA	A0A1X9I5X6	Streptococcus_phage	100.0	6.7e-63
WP_029743088.1|866981_867368_+|holin	holin	holin	A0A1X9I5Y2	Streptococcus_phage	100.0	1.1e-61
WP_024409231.1|867464_868202_+	CHAP domain-containing protein	NA	A0A1X9I5W6	Streptococcus_phage	100.0	1.9e-139
WP_024394270.1|868266_868644_+	hypothetical protein	NA	A0A1X9I733	Streptococcus_phage	100.0	1.9e-63
WP_002935295.1|869135_870338_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	99.8	1.4e-224
WP_002935451.1|870552_872343_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	100.0	0.0e+00
WP_002935455.1|872509_872848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002935458.1|873032_874400_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_009909707.1|874689_876969_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.0	1.2e-128
WP_009909709.1|877410_878151_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013730335.1|878429_879113_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA	NA
WP_013730336.1|879191_879956_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 6
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	1036364	1049803	2247350		Streptococcus_phage(71.43%)	10	NA	NA
WP_024383728.1|1036364_1037057_+	helix-turn-helix transcriptional regulator	NA	A0A1B0RXB1	Streptococcus_phage	72.5	1.3e-86
WP_099425924.1|1037059_1037194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024383729.1|1037199_1038615_+	Y-family DNA polymerase	NA	Q6DMX4	Streptococcus_phage	71.8	1.2e-198
WP_024383730.1|1038611_1038962_+	hypothetical protein	NA	M1PLN9	Streptococcus_phage	51.6	4.3e-25
WP_024383731.1|1038948_1039242_+	hypothetical protein	NA	E4ZFJ0	Streptococcus_phage	64.6	6.3e-30
WP_024383732.1|1039288_1039927_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_024406080.1|1039923_1047195_-	DEAD/DEAH box helicase family protein	NA	A0A248SL14	Klebsiella_phage	37.4	4.1e-287
WP_024383734.1|1047213_1047666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024406079.1|1047662_1048622_-	DNA cytosine methyltransferase	NA	D2IZY5	Enterococcus_phage	49.5	7.3e-75
WP_029742340.1|1048618_1049803_-	DNA (cytosine-5-)-methyltransferase	NA	A0A141E1L1	Streptococcus_phage	58.4	1.4e-123
>prophage 7
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	1136324	1146526	2247350		Streptococcus_phage(33.33%)	12	NA	NA
WP_099425929.1|1136324_1137680_-	DNA (cytosine-5-)-methyltransferase	NA	A0A141E1L1	Streptococcus_phage	56.3	4.7e-128
WP_099425930.1|1137731_1137827_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053338596.1|1137828_1138647_-	replication initiator protein A	NA	A0A286QNA4	Streptococcus_phage	35.5	4.9e-11
WP_032499127.1|1138649_1138817_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002936483.1|1139017_1139383_-	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_002936486.1|1139448_1139943_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_024409355.1|1140519_1142613_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	36.5	3.1e-102
WP_009909860.1|1142705_1143548_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	44.3	4.7e-33
WP_009909862.1|1143606_1144164_-	sugar O-acetyltransferase	NA	A0A191KBJ5	Streptococcus_virus	38.6	4.9e-07
WP_009909865.1|1144174_1144435_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_002936495.1|1144553_1144877_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_002936496.1|1144873_1146526_+	pyridine nucleotide-disulfide oxidoreductase family protein	NA	A0A2K5B2C5	Erysipelothrix_phage	24.3	6.2e-13
>prophage 8
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	1335849	1386459	2247350	tRNA,protease,transposase	Streptococcus_phage(30.0%)	49	NA	NA
WP_002935153.1|1335849_1337052_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	93.8	3.2e-213
WP_009910073.1|1337344_1340839_-	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_009910076.1|1340935_1341244_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_002936073.1|1341250_1342066_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_002936077.1|1342052_1342829_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_002936080.1|1342848_1343340_-	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_002936082.1|1343349_1344540_-	glucuronyl hydrolase	NA	NA	NA	NA	NA
WP_032505201.1|1344551_1344986_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_022540650.1|1345271_1345913_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_002936090.1|1345923_1346925_-	sugar kinase	NA	NA	NA	NA	NA
WP_002936092.1|1346941_1347583_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA	NA
WP_002936093.1|1347634_1348450_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002936094.1|1349360_1350455_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_002936095.1|1350562_1351237_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002936096.1|1351246_1351564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012775187.1|1351573_1352263_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_012028277.1|1352288_1352507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013730414.1|1352516_1353275_-	DUF3169 family protein	NA	NA	NA	NA	NA
WP_009910096.1|1353271_1353487_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013730415.1|1353499_1354066_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_002938096.1|1354216_1354411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002938097.1|1354614_1355067_-	cytidine deaminase	NA	NA	NA	NA	NA
WP_009910105.1|1355141_1357760_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.2	1.5e-61
WP_002938099.1|1358039_1358525_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002938100.1|1358790_1359792_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA	NA
WP_009910106.1|1359852_1360572_-	O-methyltransferase	NA	NA	NA	NA	NA
WP_002938103.1|1360646_1361195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002938105.1|1361210_1361651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009910108.1|1361652_1363455_-	oligoendopeptidase F	NA	NA	NA	NA	NA
WP_002938107.1|1363686_1364628_-	competence protein CoiA	NA	NA	NA	NA	NA
WP_074390814.1|1364691_1366749_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SEZ7	Hokovirus	31.1	5.8e-85
WP_002938116.1|1366848_1367442_+	DUF1361 domain-containing protein	NA	NA	NA	NA	NA
WP_002938119.1|1367742_1368780_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	34.3	2.2e-45
WP_002938121.1|1368789_1369815_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	35.2	3.2e-44
WP_002938123.1|1369860_1370730_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_002938125.1|1370742_1371810_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_014636474.1|1371859_1371958_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002938126.1|1372013_1372814_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.8	9.0e-10
WP_013730419.1|1372823_1373717_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_013730420.1|1373771_1374746_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013730421.1|1374769_1375729_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013730422.1|1376469_1377471_-	tagatose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_013730423.1|1377494_1378640_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_002935153.1|1379019_1380222_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	93.8	3.2e-213
WP_009909534.1|1380770_1381607_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_009909533.1|1381627_1382260_-	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	6.6e-32
WP_013730426.1|1382269_1382911_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_013730427.1|1383084_1384896_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	Q84421	Paramecium_bursaria_Chlorella_virus	37.6	9.5e-100
WP_013730428.1|1385202_1386459_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	56.4	7.5e-128
>prophage 9
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	1474659	1489199	2247350	integrase	Streptococcus_phage(100.0%)	24	1476479:1476495	1485935:1485951
WP_002935693.1|1474659_1474845_+	hypothetical protein	NA	W6LMT3	Streptococcus_phage	68.9	2.3e-17
WP_002935700.1|1474877_1475519_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_009910443.1|1475685_1475946_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	55.8	3.9e-23
WP_012775256.1|1475947_1476169_-	hypothetical protein	NA	A0A1X9I609	Streptococcus_phage	100.0	1.2e-33
1476479:1476495	attL	TTATTTTTTCAAGTTGT	NA	NA	NA	NA
WP_009910447.1|1477275_1477485_-	hypothetical protein	NA	A0A1X9I6N3	Streptococcus_phage	100.0	1.0e-34
WP_009910448.1|1477596_1478049_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A1X9I727	Streptococcus_phage	100.0	1.7e-82
WP_099425937.1|1478088_1478298_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1X9I5W4	Streptococcus_phage	100.0	5.5e-28
WP_009910450.1|1478454_1478841_-	hypothetical protein	NA	A0A1X9I5X3	Streptococcus_phage	100.0	4.6e-60
WP_024409209.1|1478980_1479481_-	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	100.0	1.3e-94
WP_024409208.1|1479550_1479991_-	hypothetical protein	NA	A0A1X9I5V5	Streptococcus_phage	100.0	2.0e-75
WP_024409207.1|1480458_1481304_-	ATP-binding protein	NA	A0A1X9I6C4	Streptococcus_phage	100.0	2.6e-156
WP_079269917.1|1481319_1482114_-	DnaD domain protein	NA	A0A1X9I617	Streptococcus_phage	100.0	1.3e-149
WP_024409205.1|1482127_1482343_-	hypothetical protein	NA	A0A1X9I5W7	Streptococcus_phage	100.0	2.4e-34
WP_024409204.1|1482516_1482783_-	hypothetical protein	NA	A0A1X9I6M4	Streptococcus_phage	100.0	5.6e-41
WP_024409203.1|1482793_1482997_-	hypothetical protein	NA	A0A1X9I725	Streptococcus_phage	100.0	2.8e-29
WP_024409202.1|1482989_1483193_-	hypothetical protein	NA	A0A1X9I5V6	Streptococcus_phage	100.0	4.4e-30
WP_024409201.1|1483182_1483458_-	hypothetical protein	NA	A0A1X9I5W5	Streptococcus_phage	100.0	8.0e-43
WP_024409200.1|1483636_1483825_-	hypothetical protein	NA	A0A1X9I5U7	Streptococcus_phage	100.0	7.2e-27
WP_024409199.1|1483982_1484528_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U6	Streptococcus_phage	100.0	9.5e-96
WP_024415669.1|1484611_1485775_+|integrase	site-specific integrase	integrase	A0A1X9I6A9	Streptococcus_phage	99.7	9.7e-223
WP_002935704.1|1485934_1487242_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	100.0	8.3e-247
1485935:1485951	attR	TTATTTTTTCAAGTTGT	NA	NA	NA	NA
WP_013730449.1|1487391_1487844_+	DUF1694 domain-containing protein	NA	NA	NA	NA	NA
WP_002935708.1|1487853_1488081_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002935718.1|1488071_1489199_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	58.0	5.7e-87
>prophage 10
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	1719353	1782993	2247350	transposase,tRNA,protease,holin,integrase	Streptococcus_phage(50.0%)	57	1717642:1717657	1775778:1775793
1717642:1717657	attL	TAGCTCTCGAATATCT	NA	NA	NA	NA
WP_002938590.1|1719353_1720556_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	93.8	2.5e-213
WP_002937990.1|1721587_1722586_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_002937991.1|1722587_1724837_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_002937992.1|1724836_1725160_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_002937995.1|1725170_1726121_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_002937996.1|1726391_1726580_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002937997.1|1726595_1726796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099425949.1|1727599_1728446_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	25.1	6.8e-08
WP_002938000.1|1728798_1729143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002938001.1|1729132_1729480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002938002.1|1729532_1729961_+	NusG domain II-containing protein	NA	NA	NA	NA	NA
WP_074390602.1|1730268_1731198_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_002938004.1|1731217_1732267_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_002938006.1|1732344_1732824_-	FMN-binding protein	NA	NA	NA	NA	NA
WP_002938008.1|1732902_1733892_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_002938009.1|1733910_1735803_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002938010.1|1735985_1736525_+	Gx transporter family protein	NA	NA	NA	NA	NA
WP_012775311.1|1736657_1736774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099425950.1|1736788_1738138_+	potassium transporter Trk	NA	NA	NA	NA	NA
WP_002938014.1|1738149_1738815_+	TrkA family potassium uptake protein	NA	NA	NA	NA	NA
WP_013730518.1|1739134_1740472_+	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_002939396.1|1740493_1740865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002939394.1|1741003_1741261_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_002939391.1|1741270_1743307_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_002939388.1|1743306_1744224_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_009910673.1|1744429_1744909_-	DUF1398 family protein	NA	NA	NA	NA	NA
WP_002939274.1|1745175_1745880_-	B3/4 domain-containing protein	NA	NA	NA	NA	NA
WP_002939275.1|1746061_1746754_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002939276.1|1746754_1747819_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	1.4e-29
WP_002939279.1|1747811_1749179_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_013730519.1|1749335_1750187_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_013730520.1|1750338_1751028_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_002939179.1|1751407_1753657_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_002939175.1|1753660_1754521_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_002942579.1|1756673_1757486_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_013730522.1|1757707_1758700_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
WP_009910688.1|1758731_1759541_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
WP_009910689.1|1759558_1760470_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_012027688.1|1760529_1760901_+	DUF956 family protein	NA	NA	NA	NA	NA
WP_012775316.1|1761118_1762393_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.6	2.0e-91
WP_009910694.1|1762443_1764033_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	51.5	2.2e-132
WP_004194690.1|1765303_1765972_-	Fic family protein	NA	D7RWK9	Brochothrix_phage	26.6	2.0e-10
WP_009910696.1|1765984_1766581_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_009910698.1|1766688_1769895_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_024382875.1|1769887_1770463_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_012028462.1|1770584_1771511_+|integrase	site-specific integrase	integrase	A8ATM2	Listeria_phage	46.5	1.9e-75
WP_024390446.1|1771590_1771989_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_029176883.1|1773107_1773623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044686576.1|1774008_1775415_-|holin	holin	holin	M1Q1X7	Streptococcus_phage	80.5	3.4e-177
WP_024390532.1|1775502_1775745_-|holin	phage holin	holin	M1PSK5	Streptococcus_phage	98.8	2.5e-40
WP_024387693.1|1775750_1776029_-	hypothetical protein	NA	M1NSI3	Streptococcus_phage	100.0	2.8e-43
1775778:1775793	attR	TAGCTCTCGAATATCT	NA	NA	NA	NA
WP_153308505.1|1776032_1776188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024402957.1|1776210_1776645_-	DUF1366 domain-containing protein	NA	A0A2P0VI59	Streptococcus_phage	38.6	1.0e-20
WP_087013714.1|1776657_1778715_-	hypothetical protein	NA	M1IR90	Streptococcus_phage	69.3	2.1e-273
WP_074390744.1|1779920_1780100_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044667207.1|1780111_1781230_-	hypothetical protein	NA	O80182	Streptococcus_virus	61.5	2.1e-121
WP_099425951.1|1781247_1782993_-	hypothetical protein	NA	M1IFB6	Streptococcus_phage	56.2	4.9e-162
>prophage 11
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	1796765	1815874	2247350	terminase,integrase	Streptococcus_phage(95.24%)	24	1786556:1786569	1818101:1818114
1786556:1786569	attL	TTCCTGTCAAAACA	NA	NA	NA	NA
WP_024390511.1|1796765_1798064_-|terminase	PBSX family phage terminase large subunit	terminase	A0A1S5SA45	Streptococcus_phage	86.0	1.5e-224
WP_044752555.1|1799063_1799477_-	DUF722 domain-containing protein	NA	A0A1X9I5N8	Streptococcus_phage	97.8	3.4e-69
WP_044752290.1|1799551_1799869_-	hypothetical protein	NA	A0A1X9I5C1	Streptococcus_phage	97.1	5.8e-53
WP_013730181.1|1800057_1800273_-	hypothetical protein	NA	A0A1X9I5W1	Streptococcus_phage	100.0	9.7e-36
WP_013730180.1|1800274_1800583_-	DUF1372 family protein	NA	A0A1X9I5G5	Streptococcus_phage	100.0	3.8e-49
WP_074390591.1|1800736_1802059_-	DEAD/DEAH box helicase	NA	A7J284	Streptococcus_phage	84.3	2.9e-223
WP_074390590.1|1802045_1802321_-	VRR-NUC domain-containing protein	NA	A7J283	Streptococcus_phage	78.2	7.5e-33
WP_074390651.1|1802688_1805067_-	DNA primase	NA	A7J282	Streptococcus_phage	78.9	6.2e-232
WP_074390652.1|1805070_1806993_-	DNA polymerase	NA	A7J280	Streptococcus_phage	78.3	8.1e-299
WP_074390653.1|1807005_1807566_-	DUF2815 family protein	NA	D2J040	Enterococcus_phage	58.8	4.3e-51
WP_074390654.1|1807577_1808735_-	DUF2800 domain-containing protein	NA	A7J278	Streptococcus_phage	81.3	5.7e-183
WP_074390655.1|1808734_1809046_-	hypothetical protein	NA	A7J277	Streptococcus_phage	42.7	2.3e-09
WP_074390661.1|1809131_1809356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_074390656.1|1809364_1809691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029174152.1|1809702_1809990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_158645946.1|1809999_1810146_-	hypothetical protein	NA	A0A1X9I650	Streptococcus_phage	60.4	1.3e-07
WP_024377134.1|1810135_1810411_-	hypothetical protein	NA	M1PRN0	Streptococcus_phage	72.3	9.2e-31
WP_074390658.1|1810763_1811090_-	hypothetical protein	NA	A0A1X9I594	Streptococcus_phage	88.0	1.4e-49
WP_074390659.1|1811169_1811373_+	hypothetical protein	NA	M1PLB3	Streptococcus_phage	94.0	9.5e-25
WP_024399172.1|1811575_1811782_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5S3	Streptococcus_phage	100.0	9.9e-30
WP_099425953.1|1812339_1813089_+	helix-turn-helix domain-containing protein	NA	A0A1X9I5R4	Streptococcus_phage	97.6	9.0e-137
WP_074390660.1|1813098_1813869_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A3F611	Streptococcus_phage	40.0	4.3e-41
WP_004194675.1|1814225_1814660_+	transcriptional modulator of MazE/toxin, MazF	NA	M1PFU7	Streptococcus_phage	100.0	1.0e-76
WP_099425954.1|1814785_1815874_+|integrase	site-specific integrase	integrase	M1Q1T0	Streptococcus_phage	97.8	8.6e-205
1818101:1818114	attR	TTCCTGTCAAAACA	NA	NA	NA	NA
>prophage 12
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	1950250	2028005	2247350	bacteriocin,transposase,tRNA,protease,integrase	Streptococcus_phage(42.86%)	73	2014876:2014894	2026703:2026721
WP_009910838.1|1950250_1951594_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	35.8	8.5e-53
WP_009910840.1|1951604_1951790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002938844.1|1951783_1952557_-	nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_002938845.1|1952571_1953189_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_002938847.1|1953242_1955462_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_002938849.1|1955764_1956034_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_002938850.1|1956288_1956930_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.1	2.7e-33
WP_002938851.1|1956922_1957654_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002938853.1|1958417_1959182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013730575.1|1959266_1959677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002938352.1|1959910_1961188_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	37.7	3.0e-60
WP_002938355.1|1961610_1962120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099425909.1|1962531_1963883_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.8	9.7e-65
WP_002938364.1|1963965_1964694_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_009910851.1|1964684_1965134_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_053338616.1|1965347_1966511_-	MFS transporter	NA	NA	NA	NA	NA
WP_013730579.1|1966640_1967255_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.5	7.9e-14
WP_009910855.1|1967443_1968229_-	translation factor Sua5	NA	NA	NA	NA	NA
WP_009910856.1|1968291_1968885_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_009910857.1|1968884_1970276_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_009910859.1|1970272_1971325_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_009910861.1|1971333_1972896_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	31.9	3.9e-09
WP_029743083.1|1973354_1974608_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_024409186.1|1974639_1975563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024409187.1|1975719_1976427_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024409188.1|1976523_1976841_-	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_024409189.1|1976850_1977168_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_024409190.1|1977295_1977529_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_024409191.1|1977587_1978829_-	aminopeptidase	NA	NA	NA	NA	NA
WP_024409192.1|1979325_1979928_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_012775351.1|1980162_1980759_-	LemA family protein	NA	NA	NA	NA	NA
WP_009910865.1|1980845_1985237_-	PolC-type DNA polymerase III	NA	A0A0A7RWA3	Clostridium_phage	31.2	1.3e-17
WP_009910866.1|1985360_1986350_-	DhaKLM operon coactivator DhaQ	NA	NA	NA	NA	NA
WP_009910868.1|1986360_1986906_-	dihydroxyacetone kinase transcriptional activator DhaS	NA	NA	NA	NA	NA
WP_024409193.1|1987053_1988043_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA	NA
WP_009910871.1|1988053_1988629_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA	NA
WP_002938758.1|1988625_1989000_+	PTS-dependent dihydroxyacetone kinase phosphotransferase subunit DhaM	NA	NA	NA	NA	NA
WP_002938756.1|1989009_1989720_+	aquaporin family protein	NA	M1HBN0	Acanthocystis_turfacea_Chlorella_virus	34.9	1.0e-28
WP_009910872.1|1990057_1991920_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002938752.1|1992203_1993463_-|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_002938748.1|1993472_1994279_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_013730586.1|1994288_1995044_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.3	2.8e-21
WP_013730587.1|1995157_1995481_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_002937782.1|1995590_1996883_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	36.2	2.8e-69
WP_009910876.1|1997247_1999479_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA	NA
WP_013730588.1|2000035_2003155_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_013730589.1|2003234_2004101_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_009910879.1|2004093_2005098_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_009910880.1|2005198_2005690_-	adenylyltransferase/cytidyltransferase family protein	NA	A0A291I9M1	Lactobacillus_phage	38.8	1.9e-23
WP_009910884.1|2005807_2008261_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	40.1	2.2e-123
WP_013730590.1|2008264_2008717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013730591.1|2008884_2009244_+|bacteriocin	bacteriocin transporter	bacteriocin	NA	NA	NA	NA
WP_013730592.1|2009315_2011184_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_009909264.1|2011728_2012931_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	100.0	2.2e-225
WP_144063159.1|2013053_2013236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002936177.1|2013370_2014465_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_002936175.1|2014467_2014851_-	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	94.5	4.6e-36
2014876:2014894	attL	TATCACAAAATGGTATAAT	NA	NA	NA	NA
WP_013730693.1|2014988_2016161_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	96.9	3.1e-216
WP_013730692.1|2016325_2017156_-	KilA-N domain-containing protein	NA	Q4ZC41	Staphylococcus_virus	62.1	1.2e-89
WP_013730691.1|2017519_2018233_-	helix-turn-helix transcriptional regulator	NA	Q708R9	Streptococcus_phage	50.6	3.7e-15
WP_013730690.1|2018386_2018614_+	helix-turn-helix transcriptional regulator	NA	Q38329	Lactococcus_phage	51.6	2.8e-09
WP_013730689.1|2018632_2019379_+	Bro-N domain-containing protein	NA	A0A0A7RW33	Clostridium_phage	50.7	2.1e-24
WP_013730688.1|2019391_2020018_+	hypothetical protein	NA	A0A192Y918	Salmonella_phage	32.8	9.5e-15
WP_013730687.1|2020456_2020846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013730686.1|2020833_2021037_+	hypothetical protein	NA	A0A1X9I5T6	Streptococcus_phage	79.1	7.2e-25
WP_024409270.1|2021194_2021533_+	hypothetical protein	NA	A0A1X9I5Z6	Streptococcus_phage	97.8	5.1e-47
WP_013730683.1|2021522_2021807_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	83.9	8.9e-37
WP_013730682.1|2021793_2022609_+	DnaD domain protein	NA	A0A2I6QQV2	Streptococcus_phage	66.0	2.0e-81
WP_013730681.1|2022621_2023080_+	hypothetical protein	NA	A0A1X9I5V5	Streptococcus_phage	42.0	7.6e-22
WP_013730680.1|2023157_2023706_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	58.1	4.7e-50
WP_009909264.1|2024484_2025687_+|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	100.0	2.2e-225
WP_024381289.1|2025992_2026334_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_099425958.1|2026751_2028005_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	98.8	1.2e-231
2026703:2026721	attR	TATCACAAAATGGTATAAT	NA	NA	NA	NA
>prophage 13
NZ_CP024126	Streptococcus suis strain HA0609 chromosome, complete genome	2247350	2145104	2159315	2247350	integrase	Streptococcus_phage(71.43%)	16	2156154:2156168	2167055:2167069
WP_004298350.1|2145104_2146811_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.1	4.4e-38
WP_004298352.1|2146811_2148596_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	4.4e-41
WP_024417149.1|2149376_2149808_-	DUF1492 domain-containing protein	NA	A0A1S5SFS8	Streptococcus_phage	29.0	5.9e-08
WP_024417151.1|2150753_2151155_-	hypothetical protein	NA	A0A1X9I622	Streptococcus_phage	70.8	4.2e-48
WP_024417152.1|2151214_2151673_-	hypothetical protein	NA	A0A1X9I5V5	Streptococcus_phage	41.7	7.6e-22
WP_024417153.1|2151669_2152530_-	ATP-binding protein	NA	A0A1X9I6C4	Streptococcus_phage	57.1	5.4e-85
WP_044674484.1|2152544_2153363_-	DnaD domain protein	NA	A0A2I6QQV2	Streptococcus_phage	55.0	3.1e-50
WP_044674482.1|2153349_2153631_-	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	76.4	1.3e-32
WP_044674480.1|2153623_2153959_-	hypothetical protein	NA	A0A1X9I5Z6	Streptococcus_phage	88.9	4.9e-42
WP_044686673.1|2153955_2154141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_044674475.1|2154348_2154777_-	hypothetical protein	NA	A0A1X9I5T7	Streptococcus_phage	96.5	8.0e-74
WP_044666638.1|2155273_2155474_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_044674473.1|2155680_2156265_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	43.0	1.7e-21
2156154:2156168	attL	TGTTTTTAAAAAGCT	NA	NA	NA	NA
WP_013730692.1|2156627_2157458_+	KilA-N domain-containing protein	NA	Q4ZC41	Staphylococcus_virus	62.1	1.2e-89
WP_044666645.1|2157628_2158774_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	50.5	4.0e-96
WP_004298354.1|2158871_2159315_+	dUTP diphosphatase	NA	Q332E8	Clostridium_botulinum_C_phage	48.0	1.3e-31
2167055:2167069	attR	AGCTTTTTAAAAACA	NA	NA	NA	NA
