assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002736125.1_ASM273612v1	NZ_CP024085	Pseudomonas putida strain E41 chromosome, complete genome	1	1004840-1004904	1	CRISPRCasFinder	no		WYL,DEDDh,cas3,csa3,DinG,RT	Orphan	TGAGCTCAATTGAGCTGTATTTG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,csa3,DinG,RT	NA,NA	NA|345aa|up_9|NZ_CP024085.1_997373_998408_-	PRK00943, PRK00943, selenide, water dikinase SelD	NA|285aa|up_8|NZ_CP024085.1_998535_999390_+	TIGR04553, ABC_peri_selen, putative selenate ABC transporter periplasmic binding protein	NA|272aa|up_7|NZ_CP024085.1_999386_1000202_+	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|276aa|up_6|NZ_CP024085.1_1000195_1001023_+	COG3639, COG3639, ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism]	NA|256aa|up_5|NZ_CP024085.1_1001019_1001787_+	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|297aa|up_4|NZ_CP024085.1_1001816_1002707_-	COG3781, COG3781, Predicted membrane protein [Function unknown]	NA|57aa|up_3|NZ_CP024085.1_1002883_1003054_+	TIGR02683, Uncharacterized_protein_HI_1419, putative addiction module killer protein	NA|99aa|up_2|NZ_CP024085.1_1003050_1003347_+	TIGR02684, conserved_hypothetical_protein, probable addiction module antidote protein	NA|160aa|up_1|NZ_CP024085.1_1003357_1003837_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|216aa|up_0|NZ_CP024085.1_1003930_1004578_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|444aa|down_0|NZ_CP024085.1_1004922_1006254_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|141aa|down_1|NZ_CP024085.1_1006315_1006738_+	cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins	NA|350aa|down_2|NZ_CP024085.1_1007185_1008235_+	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|372aa|down_3|NZ_CP024085.1_1008249_1009365_+	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|112aa|down_4|NZ_CP024085.1_1009407_1009743_+	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|621aa|down_5|NZ_CP024085.1_1009807_1011670_+	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|303aa|down_6|NZ_CP024085.1_1011680_1012589_+	PRK13022, secF, protein translocase subunit SecF	NA|183aa|down_7|NZ_CP024085.1_1012709_1013258_+	PRK11280, PRK11280, hypothetical protein; Provisional	NA|475aa|down_8|NZ_CP024085.1_1013389_1014814_-	pfam00501, AMP-binding, AMP-binding enzyme	NA|239aa|down_9|NZ_CP024085.1_1015165_1015882_+	pfam03472, Autoind_bind, Autoinducer binding domain
GCF_002736125.1_ASM273612v1	NZ_CP024085	Pseudomonas putida strain E41 chromosome, complete genome	2	1166611-1166704	2	CRISPRCasFinder	no		WYL,DEDDh,cas3,csa3,DinG,RT	Orphan	GGCGCTGGATCACTGATGGGGCCGCTTTGC	30	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,csa3,DinG,RT	NA,NA	NA|421aa|up_9|NZ_CP024085.1_1152247_1153510_-	PRK01388, PRK01388, arginine deiminase; Provisional	NA|476aa|up_8|NZ_CP024085.1_1153542_1154970_-	TIGR03810, arginine-ornithine_antiporter, arginine-ornithine antiporter	NA|476aa|up_7|NZ_CP024085.1_1155403_1156831_+	TIGR03810, arginine-ornithine_antiporter, arginine-ornithine antiporter	NA|138aa|up_6|NZ_CP024085.1_1156810_1157224_-	pfam04304, DUF454, Protein of unknown function (DUF454)	NA|198aa|up_5|NZ_CP024085.1_1157278_1157872_-	COG3230, HemO, Heme oxygenase [Inorganic ion transport and metabolism]	NA|863aa|up_4|NZ_CP024085.1_1158046_1160635_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|321aa|up_3|NZ_CP024085.1_1160785_1161748_-	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms]	NA|171aa|up_2|NZ_CP024085.1_1161839_1162352_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|334aa|up_1|NZ_CP024085.1_1162578_1163580_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|609aa|up_0|NZ_CP024085.1_1163843_1165670_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|242aa|down_0|NZ_CP024085.1_1166849_1167575_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|485aa|down_1|NZ_CP024085.1_1167555_1169010_+	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|429aa|down_2|NZ_CP024085.1_1169155_1170442_+	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|303aa|down_3|NZ_CP024085.1_1170631_1171540_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|282aa|down_4|NZ_CP024085.1_1171532_1172378_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|385aa|down_5|NZ_CP024085.1_1172381_1173536_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|448aa|down_6|NZ_CP024085.1_1173577_1174921_+	COG3659, OprB, Carbohydrate-selective porin [Cell envelope biogenesis, outer membrane]	NA|285aa|down_7|NZ_CP024085.1_1175038_1175893_+	cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like	NA|288aa|down_8|NZ_CP024085.1_1175885_1176749_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|490aa|down_9|NZ_CP024085.1_1176960_1178430_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated
GCF_002736125.1_ASM273612v1	NZ_CP024085	Pseudomonas putida strain E41 chromosome, complete genome	3	2412378-2412525	3	CRISPRCasFinder	no		WYL,DEDDh,cas3,csa3,DinG,RT	Orphan	TTGTCGGCAGACAGGGTGAAGGCAGCCAGGTGCTTGCCTTGGGC	44	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,cas3,csa3,DinG,RT	NA,NA|121aa|down_8|NZ_CP024085.1_2422369_2422732_+	NA|364aa|up_9|NZ_CP024085.1_2401952_2403044_-	TIGR02089, Probable_tartrate_dehydrogenase/decarboxylase, tartrate dehydrogenase	NA|304aa|up_8|NZ_CP024085.1_2403141_2404053_+	cd08479, PBP2_CrgA_like_9, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|161aa|up_7|NZ_CP024085.1_2404104_2404587_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|345aa|up_6|NZ_CP024085.1_2404710_2405745_+	cd10001, HDAC_classII_APAH, Histone deacetylase class IIa	NA|466aa|up_5|NZ_CP024085.1_2405815_2407213_+	PRK11049, PRK11049, D-alanine/D-serine/glycine permease; Provisional	NA|444aa|up_4|NZ_CP024085.1_2407209_2408541_-	PRK02991, PRK02991, D-serine dehydratase; Provisional	NA|291aa|up_3|NZ_CP024085.1_2408728_2409601_-	cd08445, PBP2_BenM_CatM_CatR, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in benzoate catabolism; contains the type 2 periplasmic binding fold	NA|374aa|up_2|NZ_CP024085.1_2409736_2410858_+	cd03318, MLE, Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway	NA|97aa|up_1|NZ_CP024085.1_2410890_2411181_+	TIGR03221, muco_delta, muconolactone delta-isomerase	NA|312aa|up_0|NZ_CP024085.1_2411224_2412160_+	TIGR02439, Catechol_12-dioxygenase_1, catechol 1,2-dioxygenase, proteobacterial	NA|453aa|down_0|NZ_CP024085.1_2412652_2414011_-	cd17328, MFS_spinster_like, Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters	NA|420aa|down_1|NZ_CP024085.1_2414105_2415365_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|415aa|down_2|NZ_CP024085.1_2415435_2416680_-	pfam03573, OprD, outer membrane porin, OprD family	NA|320aa|down_3|NZ_CP024085.1_2416794_2417754_-	cd06185, PDR_like, Phthalate dioxygenase reductase (PDR) is an FMN-dependent reductase that mediates electron transfer from NADH to FMN to an iron sulfur cluster	NA|159aa|down_4|NZ_CP024085.1_2417764_2418241_-	cd00667, ring_hydroxylating_dioxygenases_beta, Ring hydroxylating dioxygenase beta subunit	NA|425aa|down_5|NZ_CP024085.1_2418255_2419530_-	cd08879, RHO_alpha_C_AntDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of Pseudomonas resinovorans strain CA10 anthranilate 1,2-dioxygenase and related aromatic ring hydroxylating dioxygenases	NA|306aa|down_6|NZ_CP024085.1_2419745_2420663_-	cd08426, PBP2_LTTR_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|390aa|down_7|NZ_CP024085.1_2421182_2422352_+	cd01159, NcnH, Naphthocyclinone hydroxylase	NA|121aa|down_8|NZ_CP024085.1_2422369_2422732_+	NA	NA|425aa|down_9|NZ_CP024085.1_2422747_2424022_+	cd08879, RHO_alpha_C_AntDO-like, C-terminal catalytic domain of the oxygenase alpha subunit of Pseudomonas resinovorans strain CA10 anthranilate 1,2-dioxygenase and related aromatic ring hydroxylating dioxygenases
