assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002706425.1_ASM270642v1	NZ_CP017713	Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 chromosome, complete genome	1	670598-670749	1	CRISPRCasFinder	no	cas3	WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	Unclear	CCGTAACATCAGAGATTTTTTGGTACAAAAAATAACCACGTTTGTGGGGTAGA	53	0	0	NA	NA	NA	1	1	Unclear	WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	NA,NA|54aa|down_1|NZ_CP017713.1_671740_671902_-,NA|72aa|down_2|NZ_CP017713.1_671947_672163_-	NA|562aa|up_9|NZ_CP017713.1_660071_661757_+	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	NA|270aa|up_8|NZ_CP017713.1_661749_662559_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|371aa|up_7|NZ_CP017713.1_662558_663671_+	cd03317, NAAAR, N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids	NA|443aa|up_6|NZ_CP017713.1_663684_665013_-	TIGR00911, High-affinity_methionine_permease, L-type amino acid transporter	NA|322aa|up_5|NZ_CP017713.1_665164_666130_-	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase	NA|282aa|up_4|NZ_CP017713.1_666309_667155_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|120aa|up_3|NZ_CP017713.1_667191_667551_-	pfam16110, DUF4828, Domain of unknown function (DUF4828)	NA|334aa|up_2|NZ_CP017713.1_667855_668857_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	cas3|420aa|up_1|NZ_CP017713.1_668856_670116_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|113aa|up_0|NZ_CP017713.1_670108_670447_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|138aa|down_0|NZ_CP017713.1_670760_671174_+	pfam11687, DUF3284, Domain of unknown function (DUF3284)	NA|54aa|down_1|NZ_CP017713.1_671740_671902_-	NA	NA|72aa|down_2|NZ_CP017713.1_671947_672163_-	NA	NA|417aa|down_3|NZ_CP017713.1_672276_673527_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|205aa|down_4|NZ_CP017713.1_673743_674358_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|450aa|down_5|NZ_CP017713.1_674541_675891_+	pfam13546, DDE_5, DDE superfamily endonuclease	NA|151aa|down_6|NZ_CP017713.1_675971_676424_-	PRK07308, PRK07308, flavodoxin; Validated	NA|295aa|down_7|NZ_CP017713.1_677672_678557_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|108aa|down_8|NZ_CP017713.1_678613_678937_-	PRK00967, PRK00967, hypothetical protein; Provisional	NA|466aa|down_9|NZ_CP017713.1_678993_680391_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]
GCF_002706425.1_ASM270642v1	NZ_CP017713	Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 chromosome, complete genome	2	724334-724445	2	CRISPRCasFinder	no		WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	Orphan	CGGACGAAGTATCGAAGAGCGACCTAAAAGTATTGATCAG	40	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	NA,NA|148aa|down_1|NZ_CP017713.1_725862_726306_-,NA|153aa|down_6|NZ_CP017713.1_732097_732556_+	NA|339aa|up_9|NZ_CP017713.1_698434_699451_+	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|79aa|up_8|NZ_CP017713.1_699621_699858_+	pfam08796, DUF1797, Protein of unknown function (DUF1797)	NA|690aa|up_7|NZ_CP017713.1_700228_702298_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|157aa|up_6|NZ_CP017713.1_709066_709537_+	COG4463, CtsR, Transcriptional repressor of class III stress genes [Transcription]	NA|830aa|up_5|NZ_CP017713.1_709557_712047_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|308aa|up_4|NZ_CP017713.1_712192_713116_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|408aa|up_3|NZ_CP017713.1_713117_714341_+	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|1197aa|up_2|NZ_CP017713.1_714711_718302_+	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|1216aa|up_1|NZ_CP017713.1_718314_721962_+	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|456aa|up_0|NZ_CP017713.1_722147_723515_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|276aa|down_0|NZ_CP017713.1_725031_725859_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|148aa|down_1|NZ_CP017713.1_725862_726306_-	NA	NA|236aa|down_2|NZ_CP017713.1_726596_727304_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|113aa|down_3|NZ_CP017713.1_727606_727945_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|482aa|down_4|NZ_CP017713.1_727996_729442_+	PRK09589, celA, 6-phospho-beta-glucosidase; Reviewed	NA|249aa|down_5|NZ_CP017713.1_729660_730407_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|153aa|down_6|NZ_CP017713.1_732097_732556_+	NA	NA|226aa|down_7|NZ_CP017713.1_732586_733264_-	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain	NA|138aa|down_8|NZ_CP017713.1_733575_733989_+	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|157aa|down_9|NZ_CP017713.1_734061_734532_+	PRK05302, PRK05302, 30S ribosomal protein S7; Validated
GCF_002706425.1_ASM270642v1	NZ_CP017713	Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 chromosome, complete genome	3	2185058-2185216	3	CRISPRCasFinder	no		WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	Orphan	CGATGTCCATTCAACTAAAGCAAAGTCCGCTAAGTTGAAACATGGCTCTACT	52	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	NA|129aa|up_7|NZ_CP017713.1_2172708_2173095_-,NA	NA|334aa|up_9|NZ_CP017713.1_2170519_2171521_-	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|295aa|up_8|NZ_CP017713.1_2171517_2172402_-	PRK05416, PRK05416, RNase adapter RapZ	NA|129aa|up_7|NZ_CP017713.1_2172708_2173095_-	NA	NA|461aa|up_6|NZ_CP017713.1_2173255_2174638_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|407aa|up_5|NZ_CP017713.1_2174641_2175862_-	PRK00509, PRK00509, argininosuccinate synthase; Provisional	NA|952aa|up_4|NZ_CP017713.1_2176072_2178928_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|669aa|up_3|NZ_CP017713.1_2179014_2181021_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|212aa|up_2|NZ_CP017713.1_2181269_2181905_-	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|575aa|up_1|NZ_CP017713.1_2182068_2183793_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|318aa|up_0|NZ_CP017713.1_2184027_2184981_-	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|136aa|down_0|NZ_CP017713.1_2185380_2185788_-	sd00006, TPR, Tetratricopeptide repeat	NA|338aa|down_1|NZ_CP017713.1_2186097_2187111_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|286aa|down_2|NZ_CP017713.1_2187150_2188008_-	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|345aa|down_3|NZ_CP017713.1_2188007_2189042_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|395aa|down_4|NZ_CP017713.1_2189323_2190508_-	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|149aa|down_5|NZ_CP017713.1_2190500_2190947_-	pfam12802, MarR_2, MarR family	NA|116aa|down_6|NZ_CP017713.1_2191072_2191420_-	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|95aa|down_7|NZ_CP017713.1_2191419_2191704_-	COG3887, COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]	NA|88aa|down_8|NZ_CP017713.1_2191703_2191967_-	pfam04024, PspC, PspC domain	NA|491aa|down_9|NZ_CP017713.1_2192054_2193527_-	COG3595, COG3595, Uncharacterized conserved protein [Function unknown]
GCF_002706425.1_ASM270642v1	NZ_CP017713	Lactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001 chromosome, complete genome	4	2699624-2701639	4,1,1	CRISPRCasFinder,CRT,PILER-CR	no	RT,csn2,cas2,cas1,cas9	WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	Type II-A,Type II-C,Type II-B	GGTTCTAAACTCATTGATTTAACACTCTTCTAAAAC,GGTTCTAAACTCATTGATTTAACACTCTTCTAAAAC,GGTTCTAAACTCATTGATTTAACACTCTTCTAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	30,30,10	30	TypeII-A,TypeII-C,TypeII-B	WYL,RT,cas3,csa3,DEDDh,DinG,cas12j,csn2,cas2,cas1,cas9	NA|49aa|up_9|NZ_CP017713.1_2689155_2689302_+,NA|49aa|up_8|NZ_CP017713.1_2689285_2689432_+,NA	NA|49aa|up_9|NZ_CP017713.1_2689155_2689302_+	NA	NA|49aa|up_8|NZ_CP017713.1_2689285_2689432_+	NA	NA|234aa|up_7|NZ_CP017713.1_2689664_2690366_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|383aa|up_6|NZ_CP017713.1_2690505_2691654_-	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate	NA|267aa|up_5|NZ_CP017713.1_2691807_2692608_-	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	RT|461aa|up_4|NZ_CP017713.1_2692906_2694289_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|276aa|up_3|NZ_CP017713.1_2695015_2695843_-	TIGR03729, acc_ester, putative phosphoesterase	NA|487aa|up_2|NZ_CP017713.1_2695953_2697414_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|214aa|up_1|NZ_CP017713.1_2697955_2698597_-	cd05267, SDR_a6, atypical (a) SDRs, subgroup 6	NA|279aa|up_0|NZ_CP017713.1_2698685_2699522_-	pfam01625, PMSR, Peptide methionine sulfoxide reductase	csn2|225aa|down_0|NZ_CP017713.1_2701666_2702341_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|107aa|down_1|NZ_CP017713.1_2702337_2702658_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_2|NZ_CP017713.1_2702620_2703526_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1355aa|down_3|NZ_CP017713.1_2703716_2707781_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|406aa|down_4|NZ_CP017713.1_2707885_2709103_-	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism]	NA|343aa|down_5|NZ_CP017713.1_2709959_2710988_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|587aa|down_6|NZ_CP017713.1_2711865_2713626_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|142aa|down_7|NZ_CP017713.1_2713683_2714109_-	pfam00582, Usp, Universal stress protein family	NA|525aa|down_8|NZ_CP017713.1_2714127_2715702_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|380aa|down_9|NZ_CP017713.1_2716313_2717453_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein
