assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	1	725037-725122	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CAATGCGAGTTGGGGTGGGGCCCCAACA	28	1	1	725065-725094	NZ_CP017679.1_766129-766100	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|69aa|up_9|NZ_CP017679.1_711880_712087_+,NA|34aa|down_1|NZ_CP017679.1_726565_726667_+,NA|52aa|down_8|NZ_CP017679.1_734831_734987_+	NA|69aa|up_9|NZ_CP017679.1_711880_712087_+	NA	NA|237aa|up_8|NZ_CP017679.1_712183_712894_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_CP017679.1_712877_713882_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_CP017679.1_714355_716296_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_CP017679.1_716566_718450_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP017679.1_718461_720243_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP017679.1_720464_721442_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP017679.1_721434_722949_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP017679.1_723188_724247_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP017679.1_724405_724948_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_CP017679.1_725555_726473_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_CP017679.1_726565_726667_+	NA	NA|502aa|down_2|NZ_CP017679.1_726744_728250_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|down_3|NZ_CP017679.1_728589_729090_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_4|NZ_CP017679.1_729109_729976_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|133aa|down_5|NZ_CP017679.1_730776_731175_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_6|NZ_CP017679.1_731137_733243_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_7|NZ_CP017679.1_733360_734332_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|52aa|down_8|NZ_CP017679.1_734831_734987_+	NA	NA|324aa|down_9|NZ_CP017679.1_735025_735997_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	2	916970-917127	1,2	PILER-CR,CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCATTGCTTGTAGAATCTCTTTTCGAAATTCT,TCTTTTCGAAATTCTCTGTGTTGGGGCCC	39,29	1	13	917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095|917077-917095	NZ_CP017679.1_771445-771463|NZ_CP017679.1_780614-780632|NZ_CP017679.1_1303370-1303388|NZ_CP017679.1_1303428-1303446|NZ_CP017679.1_1303486-1303504|NZ_CP017679.1_1954501-1954519|NZ_CP017679.1_2294494-2294476|NZ_CP017679.1_138758-138776|NZ_CP017679.1_571213-571195|NZ_CP017679.1_896804-896786|NZ_CP017679.1_1160236-1160218|NZ_CP017679.1_1377467-1377485|NZ_CP017679.1_1674284-1674302	NA:NA	2,1	2	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|192aa|up_9|NZ_CP017679.1_903408_903984_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|175aa|up_8|NZ_CP017679.1_903988_904513_+	TIGR02227, Inactive_signal_peptidase_IA	NA|192aa|up_7|NZ_CP017679.1_904528_905104_+	TIGR02227, Inactive_signal_peptidase_IA	NA|1159aa|up_6|NZ_CP017679.1_905263_908740_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1218aa|up_5|NZ_CP017679.1_908740_912394_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|301aa|up_4|NZ_CP017679.1_912559_913462_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|130aa|up_3|NZ_CP017679.1_913789_914179_+	PRK13673, PRK13673, hypothetical protein; Provisional	NA|439aa|up_2|NZ_CP017679.1_914350_915667_-	PRK13512, PRK13512, coenzyme A disulfide reductase; Provisional	NA|275aa|up_1|NZ_CP017679.1_915718_916543_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|103aa|up_0|NZ_CP017679.1_916656_916965_+	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only]	NA|605aa|down_0|NZ_CP017679.1_917618_919433_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|870aa|down_1|NZ_CP017679.1_919635_922245_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|290aa|down_2|NZ_CP017679.1_922303_923173_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|382aa|down_3|NZ_CP017679.1_923282_924428_+	COG0119, LeuA, Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]	NA|214aa|down_4|NZ_CP017679.1_924411_925053_+	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|172aa|down_5|NZ_CP017679.1_926147_926663_+	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|145aa|down_6|NZ_CP017679.1_926973_927408_+	pfam03642, MAP, MAP domain	NA|62aa|down_7|NZ_CP017679.1_927664_927850_-	pfam11151, DUF2929, Protein of unknown function (DUF2929)	NA|314aa|down_8|NZ_CP017679.1_928144_929086_+	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|415aa|down_9|NZ_CP017679.1_929097_930342_+	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	3	1035462-1035554	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAAAGCCCCTAACAACTAAAGGTTGTAAGG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|45aa|down_0|NZ_CP017679.1_1035563_1035698_-,NA|432aa|down_1|NZ_CP017679.1_1035849_1037145_+	NA|224aa|up_9|NZ_CP017679.1_1023256_1023928_+	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ	NA|730aa|up_8|NZ_CP017679.1_1023920_1026110_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_7|NZ_CP017679.1_1026088_1027573_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_6|NZ_CP017679.1_1027565_1028594_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_5|NZ_CP017679.1_1028596_1029163_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_4|NZ_CP017679.1_1029177_1030656_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_3|NZ_CP017679.1_1030677_1031925_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_2|NZ_CP017679.1_1032190_1032997_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_1|NZ_CP017679.1_1032989_1034390_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_0|NZ_CP017679.1_1034404_1034980_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|45aa|down_0|NZ_CP017679.1_1035563_1035698_-	NA	NA|432aa|down_1|NZ_CP017679.1_1035849_1037145_+	NA	NA|391aa|down_2|NZ_CP017679.1_1037569_1038742_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_3|NZ_CP017679.1_1038795_1039338_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_4|NZ_CP017679.1_1039491_1039758_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_5|NZ_CP017679.1_1039760_1041479_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_6|NZ_CP017679.1_1041715_1041949_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_7|NZ_CP017679.1_1042146_1043508_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_8|NZ_CP017679.1_1043504_1044524_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]	NA|221aa|down_9|NZ_CP017679.1_1044656_1045319_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	4	1240640-1240732	4	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,WYL	Unclear	TAAGAAACAGTAATCAATAAATTGATAACT	30	0	0	NA	NA	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|214aa|up_9|NZ_CP017679.1_1229251_1229893_+	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism]	NA|63aa|up_8|NZ_CP017679.1_1230273_1230462_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|125aa|up_7|NZ_CP017679.1_1230904_1231279_+	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown]	NA|549aa|up_6|NZ_CP017679.1_1231293_1232940_+	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only]	NA|549aa|up_5|NZ_CP017679.1_1232976_1234623_-	COG3666, COG3666, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas3|687aa|up_4|NZ_CP017679.1_1235044_1237105_+	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|191aa|up_3|NZ_CP017679.1_1237306_1237879_+	PRK04424, PRK04424, transcription factor FapR	NA|329aa|up_2|NZ_CP017679.1_1237883_1238870_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|309aa|up_1|NZ_CP017679.1_1238862_1239789_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|245aa|up_0|NZ_CP017679.1_1239781_1240516_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|78aa|down_0|NZ_CP017679.1_1240821_1241055_+	PRK00982, acpP, acyl carrier protein; Provisional	NA|244aa|down_1|NZ_CP017679.1_1241170_1241902_+	PRK00102, rnc, ribonuclease III; Reviewed	NA|1189aa|down_2|NZ_CP017679.1_1242048_1245615_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|417aa|down_3|NZ_CP017679.1_1245614_1246865_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|111aa|down_4|NZ_CP017679.1_1246851_1247184_+	PRK00118, PRK00118, putative DNA-binding protein; Validated	NA|456aa|down_5|NZ_CP017679.1_1247209_1248577_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|92aa|down_6|NZ_CP017679.1_1248922_1249198_+	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis]	NA|168aa|down_7|NZ_CP017679.1_1249385_1249889_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|246aa|down_8|NZ_CP017679.1_1249888_1250626_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|117aa|down_9|NZ_CP017679.1_1250728_1251079_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	5	1448180-1448259	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|68aa|up_5|NZ_CP017679.1_1439660_1439864_-,NA	NA|379aa|up_9|NZ_CP017679.1_1434010_1435147_+	pfam05816, TelA, Toxic anion resistance protein (TelA)	NA|448aa|up_8|NZ_CP017679.1_1435220_1436564_-	COG1114, BrnQ, Branched-chain amino acid permeases [Amino acid transport and metabolism]	NA|629aa|up_7|NZ_CP017679.1_1436788_1438675_-	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism]	NA|264aa|up_6|NZ_CP017679.1_1438688_1439480_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|68aa|up_5|NZ_CP017679.1_1439660_1439864_-	NA	NA|270aa|up_4|NZ_CP017679.1_1439892_1440702_-	cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins	NA|423aa|up_3|NZ_CP017679.1_1441281_1442550_-	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|933aa|up_2|NZ_CP017679.1_1442563_1445362_-	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|452aa|up_1|NZ_CP017679.1_1445650_1447006_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|up_0|NZ_CP017679.1_1447002_1447662_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|205aa|down_0|NZ_CP017679.1_1448803_1449418_-	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|357aa|down_1|NZ_CP017679.1_1449434_1450505_-	PRK12446, PRK12446, undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed	NA|170aa|down_2|NZ_CP017679.1_1450516_1451026_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|497aa|down_3|NZ_CP017679.1_1451425_1452916_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|74aa|down_4|NZ_CP017679.1_1453107_1453329_-	COG4479, COG4479, Uncharacterized protein conserved in bacteria [Function unknown]	NA|167aa|down_5|NZ_CP017679.1_1453328_1453829_-	COG2190, NagE, Phosphotransferase system IIA components [Carbohydrate transport and metabolism]	NA|143aa|down_6|NZ_CP017679.1_1453840_1454269_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|178aa|down_7|NZ_CP017679.1_1454261_1454795_-	PRK13014, PRK13014, methionine sulfoxide reductase A; Provisional	NA|280aa|down_8|NZ_CP017679.1_1454888_1455728_-	TIGR00762, DegV, EDD domain protein, DegV family	NA|160aa|down_9|NZ_CP017679.1_1455742_1456222_-	pfam00186, DHFR_1, Dihydrofolate reductase
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	6	1953048-1953129	6	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,csa3,WYL	Unclear	TGTTGGGGCCCCGCCAACCTGCATT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|92aa|up_6|NZ_CP017679.1_1947245_1947521_+,NA|129aa|up_1|NZ_CP017679.1_1951503_1951890_-,NA|138aa|down_1|NZ_CP017679.1_1954812_1955226_-,NA|37aa|down_2|NZ_CP017679.1_1955254_1955365_-,NA|31aa|down_6|NZ_CP017679.1_1958370_1958463_-	NA|419aa|up_9|NZ_CP017679.1_1945168_1946425_-	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29)	NA|67aa|up_8|NZ_CP017679.1_1946427_1946628_-	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_7|NZ_CP017679.1_1946774_1947239_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|92aa|up_6|NZ_CP017679.1_1947245_1947521_+	NA	NA|406aa|up_5|NZ_CP017679.1_1947798_1949016_+	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair]	NA|210aa|up_4|NZ_CP017679.1_1949128_1949758_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|348aa|up_3|NZ_CP017679.1_1949747_1950791_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|up_2|NZ_CP017679.1_1950787_1951489_-	COG4758, COG4758, Predicted membrane protein [Function unknown]	NA|129aa|up_1|NZ_CP017679.1_1951503_1951890_-	NA	NA|253aa|up_0|NZ_CP017679.1_1952106_1952865_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|329aa|down_0|NZ_CP017679.1_1953393_1954380_+	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|138aa|down_1|NZ_CP017679.1_1954812_1955226_-	NA	NA|37aa|down_2|NZ_CP017679.1_1955254_1955365_-	NA	NA|244aa|down_3|NZ_CP017679.1_1955450_1956182_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|down_4|NZ_CP017679.1_1956183_1957497_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|down_5|NZ_CP017679.1_1957788_1958289_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|down_6|NZ_CP017679.1_1958370_1958463_-	NA	DEDDh|185aa|down_7|NZ_CP017679.1_1958679_1959234_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|down_8|NZ_CP017679.1_1959300_1960371_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|down_9|NZ_CP017679.1_1960617_1961148_-	pfam11667, DUF3267, Putative zincin peptidase
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	7	2012763-2012848	7	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TGTTGAGGCCCCACCCCAACTTACATTGT	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|59aa|up_6|NZ_CP017679.1_2002903_2003080_-,NA|33aa|up_5|NZ_CP017679.1_2003321_2003420_-,NA	NA|227aa|up_9|NZ_CP017679.1_2000408_2001089_-	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein	NA|299aa|up_8|NZ_CP017679.1_2001089_2001986_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|127aa|up_7|NZ_CP017679.1_2001982_2002363_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|59aa|up_6|NZ_CP017679.1_2002903_2003080_-	NA	NA|33aa|up_5|NZ_CP017679.1_2003321_2003420_-	NA	NA|429aa|up_4|NZ_CP017679.1_2003619_2004906_+	PRK08637, PRK08637, hypothetical protein; Provisional	NA|331aa|up_3|NZ_CP017679.1_2007310_2008303_+	TIGR03395, Sphingomyelinase_C, sphingomyelin phosphodiesterase	NA|339aa|up_2|NZ_CP017679.1_2008795_2009812_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|352aa|up_1|NZ_CP017679.1_2009833_2010889_-	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|408aa|up_0|NZ_CP017679.1_2011324_2012548_+	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|436aa|down_0|NZ_CP017679.1_2012988_2014296_+	COG0168, TrkG, Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|539aa|down_1|NZ_CP017679.1_2014836_2016453_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|95aa|down_2|NZ_CP017679.1_2016528_2016813_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|248aa|down_3|NZ_CP017679.1_2016987_2017731_+	pfam02517, Abi, CAAX protease self-immunity	NA|400aa|down_4|NZ_CP017679.1_2017755_2018955_-	PRK10819, PRK10819, transport protein TonB; Provisional	NA|209aa|down_5|NZ_CP017679.1_2019151_2019778_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|262aa|down_6|NZ_CP017679.1_2020138_2020924_+	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|45aa|down_7|NZ_CP017679.1_2021522_2021657_-	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin	NA|190aa|down_8|NZ_CP017679.1_2021892_2022462_+	smart00793, AgrB, Accessory gene regulator B	NA|47aa|down_9|NZ_CP017679.1_2022458_2022599_+	pfam05931, AgrD, Staphylococcal AgrD protein
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	8	2414739-2414831	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTTCAAATTTATTTGTTAGAAAG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|35aa|up_2|NZ_CP017679.1_2412392_2412497_+,NA|32aa|down_0|NZ_CP017679.1_2415035_2415131_-	NA|200aa|up_9|NZ_CP017679.1_2405869_2406469_-	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|121aa|up_8|NZ_CP017679.1_2406487_2406850_-	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467)	NA|417aa|up_7|NZ_CP017679.1_2407104_2408355_+	pfam02388, FemAB, FemAB family	NA|244aa|up_6|NZ_CP017679.1_2408451_2409183_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|240aa|up_5|NZ_CP017679.1_2409179_2409899_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|260aa|up_4|NZ_CP017679.1_2409879_2410659_-	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|480aa|up_3|NZ_CP017679.1_2410779_2412219_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|35aa|up_2|NZ_CP017679.1_2412392_2412497_+	NA	NA|229aa|up_1|NZ_CP017679.1_2412650_2413337_-	PRK14119, gpmA, phosphoglyceromutase; Provisional	NA|289aa|up_0|NZ_CP017679.1_2413662_2414529_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|32aa|down_0|NZ_CP017679.1_2415035_2415131_-	NA	NA|437aa|down_1|NZ_CP017679.1_2415225_2416536_+	pfam11621, Sbi-IV, C3 binding domain 4 of IgG-bind protein SBI	NA|310aa|down_2|NZ_CP017679.1_2417027_2417957_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|316aa|down_3|NZ_CP017679.1_2418524_2419472_+	pfam07968, Leukocidin, Leukocidin/Hemolysin toxin family	NA|326aa|down_4|NZ_CP017679.1_2419473_2420451_+	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|156aa|down_5|NZ_CP017679.1_2420502_2420970_-	pfam06177, QueT, QueT transporter	NA|231aa|down_6|NZ_CP017679.1_2420980_2421673_-	COG1424, BioW, Pimeloyl-CoA synthetase [Coenzyme metabolism]	NA|372aa|down_7|NZ_CP017679.1_2421683_2422799_-	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]	NA|336aa|down_8|NZ_CP017679.1_2422776_2423784_-	PRK06256, PRK06256, biotin synthase; Validated	NA|453aa|down_9|NZ_CP017679.1_2423785_2425144_-	TIGR00508, hypothetical_protein_DESPIG_00326, adenosylmethionine-8-amino-7-oxononanoate transaminase
GCF_002633845.1_ASM263384v1	NZ_CP017679	Staphylococcus aureus strain CFSAN007883 chromosome, complete genome	9	2752165-2752250	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAACTTGCACATTATTGTAAGCTGACTTT	30	1	12	2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220|2752195-2752220	NZ_CP017679.1_571279-571254|NZ_CP017679.1_1164494-1164469|NZ_CP017679.1_1303303-1303328|NZ_CP017679.1_734523-734498|NZ_CP017679.1_734579-734554|NZ_CP017679.1_780490-780515|NZ_CP017679.1_1819857-1819832|NZ_CP017679.1_2002717-2002742|NZ_CP017679.1_2177977-2178002|NZ_CP017679.1_2294559-2294534|NZ_CP017679.1_2098656-2098631|NZ_CP017679.1_2098994-2098969	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|64aa|up_6|NZ_CP017679.1_2747642_2747834_+,NA|166aa|up_5|NZ_CP017679.1_2748440_2748938_-,NA|64aa|up_4|NZ_CP017679.1_2749394_2749586_+,NA	NA|171aa|up_9|NZ_CP017679.1_2744119_2744632_-	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|253aa|up_8|NZ_CP017679.1_2744921_2745680_+	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|627aa|up_7|NZ_CP017679.1_2745669_2747550_+	pfam02687, FtsX, FtsX-like permease family	NA|64aa|up_6|NZ_CP017679.1_2747642_2747834_+	NA	NA|166aa|up_5|NZ_CP017679.1_2748440_2748938_-	NA	NA|64aa|up_4|NZ_CP017679.1_2749394_2749586_+	NA	NA|67aa|up_3|NZ_CP017679.1_2749977_2750178_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|190aa|up_2|NZ_CP017679.1_2750304_2750874_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|132aa|up_1|NZ_CP017679.1_2751124_2751520_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|118aa|up_0|NZ_CP017679.1_2751587_2751941_-	pfam11345, DUF3147, Protein of unknown function (DUF3147)	NA|280aa|down_0|NZ_CP017679.1_2752550_2753390_-	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein	NA|240aa|down_1|NZ_CP017679.1_2753432_2754152_-	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|626aa|down_2|NZ_CP017679.1_2754151_2756029_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|460aa|down_3|NZ_CP017679.1_2756095_2757475_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|118aa|down_4|NZ_CP017679.1_2757618_2757972_-	PRK00499, rnpA, ribonuclease P; Reviewed	NA|46aa|down_5|NZ_CP017679.1_2758092_2758230_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
