The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	358013	376405	2786129	integrase,terminase,transposase,coat	Staphylococcus_phage(95.0%)	25	354738:354752	369046:369060
354738:354752	attL	TATTACTAAAACAAA	NA	NA	NA	NA
WP_001052484.1|358013_358205_-	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	1.1e-22
WP_001261460.1|358448_358745_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_000934799.1|358765_359269_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_000897044.1|359320_359563_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_031765313.1|360703_361918_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	95.8	2.0e-218
WP_000668215.1|362181_362907_-	helix-turn-helix transcriptional regulator	NA	Q4ZE79	Staphylococcus_phage	28.1	3.1e-17
WP_001245562.1|363079_363292_+	helix-turn-helix transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	87.1	6.6e-29
WP_001138300.1|363292_363565_+	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	94.4	7.2e-44
WP_000784875.1|363576_363723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058486.1|363715_363925_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_001103945.1|363927_364251_+	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	58.2	6.6e-20
WP_031765319.1|364315_365185_+	mobile element-associated protein	NA	A0A1W6JQL5	Staphylococcus_phage	98.6	2.4e-165
WP_031765320.1|365201_366659_+	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	96.5	3.5e-278
WP_031765322.1|366959_367322_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	94.2	6.0e-62
WP_000998179.1|367323_367608_+	hypothetical protein	NA	A0A1W6JQE4	Staphylococcus_phage	100.0	1.2e-49
WP_031765326.1|367604_368246_+	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	88.3	4.5e-105
WP_001288441.1|368953_369298_+	hypothetical protein	NA	A0A1W6JQF3	Staphylococcus_phage	100.0	1.4e-57
369046:369060	attR	TATTACTAAAACAAA	NA	NA	NA	NA
WP_031769358.1|369332_369911_+	hypothetical protein	NA	A0A1W6JQG0	Staphylococcus_phage	100.0	9.2e-81
WP_031765331.1|370139_370667_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	95.4	4.3e-85
WP_031769360.1|370669_371011_+	hypothetical protein	NA	A0A1W6JQM3	Staphylococcus_phage	99.1	4.9e-58
WP_001293088.1|371007_371577_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.4	7.9e-101
WP_001035599.1|371731_372436_-	toxic shock syndrome toxin TSST-1	NA	NA	NA	NA	NA
WP_153153625.1|372846_373011_+	hypothetical protein	NA	U3PG28	Staphylococcus_phage	44.4	1.9e-07
WP_000609031.1|373630_374401_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_099130504.1|374686_376405_+|transposase	IS1182 family transposase	transposase	A0ZS58	Staphylococcus_virus	77.9	1.5e-240
>prophage 2
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	726523	734344	2786129		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|726523_727579_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|727578_728265_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|728239_728713_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|729055_729496_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|729775_730360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|730458_731172_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|731175_731595_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|731596_732265_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|732615_733209_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217796.1|733192_734344_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
>prophage 3
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	746315	760678	2786129		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|746315_747374_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197262.1|747712_748255_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|748855_749773_-	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031760357.1|749863_749965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|750042_751548_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|751888_752389_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068501.1|752408_753275_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|754075_754474_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|754436_756542_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|756659_757631_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|757811_757967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|758005_758977_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|758963_759920_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|759916_760678_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 4
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	846440	902494	2786129	head,tail,plate,integrase,capsid,transposase,terminase,portal,holin	Staphylococcus_phage(70.0%)	72	844528:844544	878315:878331
844528:844544	attL	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_099130519.1|846440_847682_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.4e-110
WP_001010508.1|847671_848136_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074405.1|848286_849684_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_031764589.1|849751_850801_-|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	99.7	5.9e-203
WP_031790428.1|850863_851379_-	hypothetical protein	NA	I1W624	Staphylococcus_phage	99.4	7.2e-37
WP_000896616.1|851382_851883_-	hypothetical protein	NA	B7T094	Staphylococcus_virus	100.0	1.1e-71
WP_000874711.1|851933_852572_-	LexA family transcriptional regulator	NA	I1W622	Staphylococcus_phage	100.0	1.5e-116
WP_031790429.1|852761_853016_+	helix-turn-helix transcriptional regulator	NA	B7T095	Staphylococcus_virus	100.0	1.8e-41
WP_000394020.1|853031_853235_+	hypothetical protein	NA	A0A0E3XBM9	Staphylococcus_phage	100.0	4.7e-32
WP_001148575.1|853422_854214_+	phage antirepressor KilAC domain-containing protein	NA	Q8SDX0	Staphylococcus_phage	99.6	2.5e-145
WP_031790430.1|854214_854439_+	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	98.6	5.5e-34
WP_031790431.1|854478_854928_+	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	98.7	1.5e-78
WP_000977379.1|854941_855172_+	hypothetical protein	NA	E0Y3P2	Staphylococcus_virus	100.0	1.2e-31
WP_000066005.1|855155_855317_+	DUF1270 family protein	NA	A0A2I6PDF7	Staphylococcus_phage	96.2	4.3e-20
WP_099130520.1|855408_855669_+	DUF1108 family protein	NA	A0A0H4IP62	Staphylococcus_phage	95.3	6.4e-42
WP_001205732.1|855677_855941_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700562.1|855949_857893_+	AAA family ATPase	NA	A0A2I6PDH3	Staphylococcus_phage	99.2	0.0e+00
WP_000138475.1|857894_858815_+	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_071621397.1|858895_859513_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000934770.1|859513_859984_+	single-stranded DNA-binding protein	NA	A0A0E3T9H6	Staphylococcus_phage	99.4	4.8e-80
WP_000148301.1|860013_860898_+	DnaD domain protein	NA	S4V6D4	Staphylococcus_phage	95.9	3.1e-136
WP_000338528.1|860904_861123_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401965.1|861131_861587_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A1P8L6F2	Staphylococcus_phage	99.3	5.9e-83
WP_000131381.1|861973_862216_+	hypothetical protein	NA	A0A1P8L6E3	Staphylococcus_phage	100.0	3.0e-41
WP_025174939.1|862230_862482_+	DUF1024 family protein	NA	E0Y3Q8	Staphylococcus_virus	100.0	1.4e-38
WP_000454994.1|862645_862927_+	hypothetical protein	NA	A0A2I6PDX3	Staphylococcus_phage	100.0	8.5e-48
WP_025920701.1|863103_863637_+	dUTPase	NA	E0Y3R2	Staphylococcus_virus	99.4	1.3e-94
WP_000195826.1|863673_863880_+	DUF1381 domain-containing protein	NA	Q4ZCV6	Staphylococcus_virus	97.1	2.7e-19
WP_000592207.1|863876_864263_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_031925651.1|864259_864433_+	transcriptional regulator	NA	Q4ZBK0	Staphylococcus_phage	98.2	3.2e-21
WP_000990003.1|864433_864580_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	97.9	2.9e-15
WP_094637849.1|864594_865014_+	transcriptional regulator	NA	B7T0C4	Staphylococcus_virus	98.6	6.9e-70
WP_001003271.1|865200_865641_+|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	100.0	4.8e-74
WP_000169945.1|865627_866905_+|terminase	PBSX family phage terminase large subunit	terminase	S4V685	Staphylococcus_phage	100.0	1.3e-249
WP_000921887.1|866915_868451_+|portal	phage portal protein	portal	A1KX25	Staphylococcus_virus	100.0	5.8e-292
WP_001813737.1|868457_869453_+|head	phage head morphogenesis protein	head	E0Y3K7	Staphylococcus_virus	99.4	3.8e-183
WP_031925652.1|869783_870404_+	DUF4355 domain-containing protein	NA	B2ZYY4	Staphylococcus_phage	92.2	1.2e-67
WP_000438500.1|870417_871392_+|capsid	phage major capsid protein	capsid	B7T0D2	Staphylococcus_virus	99.7	1.8e-182
WP_001114085.1|871413_871701_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	100.0	4.7e-46
WP_000208959.1|871709_872042_+|head,tail	phage head-tail connector protein	head,tail	E0Y3L2	Staphylococcus_virus	100.0	7.1e-54
WP_031880723.1|872038_872341_+	hypothetical protein	NA	E0Y3L3	Staphylococcus_virus	99.0	7.4e-50
WP_001017815.1|872340_872688_+	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_000188640.1|872699_873083_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	98.4	1.0e-67
WP_031898198.1|873101_873683_+|tail	phage major tail protein, TP901-1 family	tail	Q8SDU0	Staphylococcus_phage	97.9	3.5e-104
WP_031898197.1|873744_874110_+|tail	tail assembly protein	tail	A0A0F6N4J9	Staphylococcus_phage	99.2	6.2e-59
WP_001599101.1|874139_874484_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	99.1	7.2e-57
WP_050961197.1|874500_877968_+	hypothetical protein	NA	A0EWM3	Staphylococcus_virus	99.3	1.7e-246
WP_099130521.1|877991_878927_+|tail	phage tail family protein	tail	Q8SDT6	Staphylococcus_phage	99.4	2.8e-180
878315:878331	attR	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_000156414.1|878935_880837_+	peptidase	NA	Q8SDT5	Staphylococcus_phage	97.9	0.0e+00
WP_099130522.1|880851_882762_+	hypothetical protein	NA	B2ZYZ7	Staphylococcus_phage	99.2	0.0e+00
WP_031898193.1|882761_884585_+|plate	phage baseplate upper protein	plate	B1H3M3	Staphylococcus_phage	99.8	0.0e+00
WP_000705896.1|884584_884962_+	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000782200.1|884964_885138_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466777.1|885178_885478_+	DUF2951 domain-containing protein	NA	A0A0F6N3M6	Staphylococcus_phage	100.0	9.9e-47
WP_029549410.1|885614_887513_+	CHAP domain-containing protein	NA	Q8SDT1	Staphylococcus_phage	99.7	0.0e+00
WP_000276641.1|887525_888764_+|plate	BppU family phage baseplate upper protein	plate	E0Y3M8	Staphylococcus_virus	100.0	3.5e-210
WP_000398878.1|888768_889164_+	hypothetical protein	NA	Q4ZBP5	Staphylococcus_phage	100.0	2.7e-68
WP_000351119.1|889219_889495_+|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_001035620.1|890953_891511_-	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
WP_001788502.1|891885_892038_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_000139423.1|892108_892219_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_000382163.1|892205_892406_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000274029.1|893235_893550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000582326.1|893914_894955_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_000267236.1|894968_896036_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_016170465.1|896289_896373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000608129.1|896420_897269_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_000927632.1|897281_898109_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_001241246.1|898135_899455_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000201875.1|899538_900456_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_000598444.1|900585_900969_+	YutD family protein	NA	NA	NA	NA	NA
WP_001557163.1|901174_902494_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	1049060	1057533	2786129		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|1049060_1049543_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010413.1|1049529_1050654_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1050657_1051362_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1051361_1051625_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|1051626_1052298_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000032740.1|1052290_1054480_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|1054458_1055943_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|1055935_1056964_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|1056966_1057533_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 6
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	1675521	1684564	2786129	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1675521_1676040_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|1676061_1678335_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|1678537_1680817_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1681091_1681352_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1681370_1682510_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1682532_1683558_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1683559_1684564_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	1809510	1871709	2786129	protease,tRNA	Staphylococcus_phage(95.65%)	59	NA	NA
WP_099130559.1|1809510_1816071_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000836461.1|1816396_1816708_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001108730.1|1816729_1819144_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|1819434_1820616_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|1820725_1821679_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1821675_1822239_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1822361_1822763_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1823334_1824162_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1824164_1824284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099130560.1|1824395_1825397_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.1	5.9e-184
WP_001008549.1|1825518_1825983_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|1825995_1827177_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|1827187_1827820_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000384185.1|1827826_1828858_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	4.0e-196
WP_099130561.1|1829350_1830853_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|1831375_1831690_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|1831689_1832982_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032833.1|1833068_1833923_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_058343104.1|1834198_1834423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|1834621_1835092_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|1835204_1835648_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1835634_1836078_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|1836373_1837009_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1837448_1838162_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|1838421_1838724_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1838979_1839345_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|1839341_1839695_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|1841691_1842525_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|1842736_1843645_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|1843766_1844963_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|1845334_1846927_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|1847304_1848051_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672013.1|1848055_1848529_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1848594_1848852_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|1848848_1849850_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|1849854_1851333_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|1851491_1851947_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|1852249_1852900_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|1852980_1853976_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|1854050_1854677_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|1854717_1855059_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|1855159_1855732_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|1857086_1857182_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|1857304_1857406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072627.1|1858481_1859711_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_001793440.1|1859703_1861443_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	2.4e-289
WP_001791797.1|1861423_1861558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|1861620_1862340_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_011447030.1|1862441_1862549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|1862497_1863217_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038872.1|1863337_1864057_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|1864114_1864837_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|1864961_1865669_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001092780.1|1866621_1867203_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000469591.1|1867675_1867894_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
WP_000550252.1|1868149_1868623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|1868627_1869419_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|1869788_1870772_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000473596.1|1870773_1871709_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 8
NZ_CP017682	Staphylococcus aureus strain CFSAN007850 chromosome, complete genome	2786129	1965530	2058810	2786129	protease,head,tail,tRNA,integrase,capsid,portal,terminase,holin	Staphylococcus_phage(85.92%)	108	1961967:1961991	2061096:2061120
1961967:1961991	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000170162.1|1965530_1965833_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|1966199_1967738_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|1967826_1969026_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|1969038_1971042_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_099130562.1|1971045_1973238_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272056.1|1973234_1973927_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|1974098_1974401_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|1974509_1975805_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|1976664_1977831_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|1977861_1978188_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|1978479_1978653_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|1978633_1979236_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|1979506_1980328_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284436.1|1980320_1981790_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|1981973_1983050_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|1983069_1983864_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|1983935_1984043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|1984053_1985616_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|1985820_1986918_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|1987286_1987847_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|1987899_1988829_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|1989021_1989195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021210.1|1989246_1990626_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|1990745_1991774_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|1992043_1992445_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|1993017_1993191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|1993641_1994682_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|1994738_1995581_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|1995577_1996135_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|1996194_1996719_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|1996839_1997403_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|1997468_1998209_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|1998208_1999081_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_000645727.1|1999077_1999758_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|1999758_2000655_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|2000651_2001032_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2001289_2001466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2001708_2001807_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|2002006_2003293_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671712.1|2003571_2003862_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001557458.1|2003876_2005307_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669789.1|2006264_2006444_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2006758_2007019_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702262.1|2007071_2007422_-	complement inhibitor SCIN-A	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
WP_000727645.1|2008104_2008554_+	chemotaxis-inhibiting protein CHIPS	NA	A0A075LZI2	Staphylococcus_phage	100.0	8.7e-79
WP_000920042.1|2009629_2010121_-	staphylokinase	NA	A0A075LYD3	Staphylococcus_phage	100.0	8.0e-86
WP_000861026.1|2010311_2011067_-	CHAP domain-containing protein	NA	A0A075LZV3	Staphylococcus_phage	100.0	1.2e-152
WP_000611512.1|2011078_2011333_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_031762631.1|2011384_2011492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2011544_2011721_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000034846.1|2011923_2012706_-	staphylococcal enterotoxin type P	NA	A0A075M4C7	Staphylococcus_phage	99.6	1.6e-149
WP_000340977.1|2013117_2013492_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001262621.1|2013547_2013835_-	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_001000058.1|2013880_2014033_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_000582152.1|2014025_2017808_-	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	99.6	0.0e+00
WP_000567396.1|2017823_2019308_-|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
WP_000504568.1|2019304_2023834_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	97.0	0.0e+00
WP_001096355.1|2024078_2024429_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|2024478_2024703_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268740.1|2024744_2025389_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|2025389_2025797_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|2025793_2026198_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|2026194_2026557_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|2026540_2026825_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238237.1|2026837_2027098_-	hypothetical protein	NA	A0A0H3U504	Staphylococcus_phage	100.0	6.4e-42
WP_000154559.1|2027117_2028263_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|2028286_2029024_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025274.1|2029007_2030195_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000625088.1|2030210_2031872_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|2031868_2032213_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988332.1|2032342_2032642_-	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
WP_000590122.1|2032873_2033290_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_001557462.1|2033317_2033518_-	DUF1514 domain-containing protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000595265.1|2033517_2033667_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195784.1|2033663_2033870_-	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_001282077.1|2033866_2034112_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000185693.1|2034148_2034685_-	hypothetical protein	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_000338528.1|2034934_2035153_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000148333.1|2035159_2036053_-	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000934759.1|2036082_2036553_-	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_064135358.1|2036553_2037171_-	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000180600.1|2037251_2038172_-	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
WP_000700554.1|2038173_2040117_-	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
WP_001205732.1|2040125_2040389_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291510.1|2040397_2040658_-	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_000165371.1|2040662_2040965_-	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000048129.1|2041059_2041221_-	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_001120201.1|2041217_2041541_-	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000762521.1|2041595_2041976_+	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001148856.1|2041962_2042160_-	hypothetical protein	NA	O80075	Staphylococcus_phage	100.0	2.5e-30
WP_001148605.1|2042175_2042928_-	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_000128909.1|2042978_2043308_+	hypothetical protein	NA	M9NS98	Staphylococcus_phage	98.2	5.1e-52
WP_001025404.1|2043296_2043512_-	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000854072.1|2043527_2043791_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001031454.1|2043924_2044638_+	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_099130564.1|2044653_2045586_+	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	99.7	2.8e-172
WP_000591749.1|2045591_2045933_+	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000694772.1|2046135_2046318_+	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_001558608.1|2046417_2047401_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000427213.1|2047411_2047654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000857180.1|2047716_2048754_+|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	98.6	1.4e-175
WP_000595392.1|2049872_2050889_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|2050910_2051966_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206625.1|2052401_2053625_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045079.1|2054068_2055376_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|2055915_2057532_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2057607_2057892_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_099130565.1|2058066_2058810_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
2061096:2061120	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
