assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002591155.1_ASM259115v1	NZ_CP023965	Proteus vulgaris strain FDAARGOS_366 chromosome, complete genome	1	497096-497188	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL,DinG	Orphan	AGTCAACAACGCTACAGCTTGAAGTATG	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL,DinG	NA,NA|276aa|down_1|NZ_CP023965.1_497736_498564_-	NA|262aa|up_9|NZ_CP023965.1_488186_488972_-	PRK10921, PRK10921, Sec-independent protein translocase subunit TatC	NA|172aa|up_8|NZ_CP023965.1_488975_489491_-	PRK01770, PRK01770, Sec-independent protein translocase subunit TatB	NA|90aa|up_7|NZ_CP023965.1_489494_489764_-	PRK04598, tatA, twin-arginine translocase subunit TatA	NA|546aa|up_6|NZ_CP023965.1_489889_491527_-	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed	NA|214aa|up_5|NZ_CP023965.1_491526_492168_-	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown]	NA|252aa|up_4|NZ_CP023965.1_492169_492925_-	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|447aa|up_3|NZ_CP023965.1_493008_494349_-	PRK10361, PRK10361, DNA recombination protein RmuC; Provisional	NA|177aa|up_2|NZ_CP023965.1_494451_494982_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|261aa|up_1|NZ_CP023965.1_495053_495836_-	pfam13350, Y_phosphatase3, Tyrosine phosphatase family	NA|253aa|up_0|NZ_CP023965.1_495984_496743_-	PRK11178, PRK11178, uridine phosphorylase; Provisional	NA|131aa|down_0|NZ_CP023965.1_497265_497658_+	COG3753, COG3753, Uncharacterized protein conserved in bacteria [Function unknown]	NA|276aa|down_1|NZ_CP023965.1_497736_498564_-	NA	NA|758aa|down_2|NZ_CP023965.1_498745_501019_-	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|318aa|down_3|NZ_CP023965.1_501125_502079_+	PRK15421, PRK15421, HTH-type transcriptional regulator MetR	NA|291aa|down_4|NZ_CP023965.1_501993_502866_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|550aa|down_5|NZ_CP023965.1_502868_504518_-	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309	NA|168aa|down_6|NZ_CP023965.1_504925_505429_-	PRK10140, PRK10140, N-acetyltransferase	NA|449aa|down_7|NZ_CP023965.1_505556_506903_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|396aa|down_8|NZ_CP023965.1_507647_508835_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|249aa|down_9|NZ_CP023965.1_509035_509782_-	pfam01925, TauE, Sulfite exporter TauE/SafE
GCF_002591155.1_ASM259115v1	NZ_CP023965	Proteus vulgaris strain FDAARGOS_366 chromosome, complete genome	2	1235651-1235730	2	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL,DinG	Orphan	CACGGTGAAGAAGGCGGATGCTG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL,DinG	NA,NA|53aa|down_3|NZ_CP023965.1_1238309_1238468_-	NA|327aa|up_9|NZ_CP023965.1_1221025_1222006_-	PRK10985, PRK10985, putative hydrolase; Provisional	NA|202aa|up_8|NZ_CP023965.1_1222105_1222711_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|287aa|up_7|NZ_CP023965.1_1223426_1224287_+	PRK11557, PRK11557, MurR/RpiR family transcriptional regulator	NA|515aa|up_6|NZ_CP023965.1_1224436_1225981_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|582aa|up_5|NZ_CP023965.1_1226080_1227826_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|563aa|up_4|NZ_CP023965.1_1228366_1230055_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|645aa|up_3|NZ_CP023965.1_1230386_1232321_-	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|184aa|up_2|NZ_CP023965.1_1232442_1232994_+	PRK04930, PRK04930, glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional	NA|618aa|up_1|NZ_CP023965.1_1232993_1234847_+	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional	NA|68aa|up_0|NZ_CP023965.1_1234860_1235064_+	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only]	NA|73aa|down_0|NZ_CP023965.1_1235877_1236096_-	PRK02793, PRK02793, phi X174 lysis protein; Provisional	NA|251aa|down_1|NZ_CP023965.1_1236430_1237183_+	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|294aa|down_2|NZ_CP023965.1_1237281_1238163_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|53aa|down_3|NZ_CP023965.1_1238309_1238468_-	NA	NA|235aa|down_4|NZ_CP023965.1_1238815_1239520_+	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown]	NA|132aa|down_5|NZ_CP023965.1_1239529_1239925_+	PRK00207, PRK00207, sulfurtransferase complex subunit TusD	NA|123aa|down_6|NZ_CP023965.1_1239924_1240293_+	PRK00211, PRK00211, sulfurtransferase complex subunit TusC	NA|98aa|down_7|NZ_CP023965.1_1240324_1240618_+	PRK13510, PRK13510, sulfurtransferase complex subunit TusB	NA|125aa|down_8|NZ_CP023965.1_1240745_1241120_+	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|157aa|down_9|NZ_CP023965.1_1241218_1241689_+	PRK05302, PRK05302, 30S ribosomal protein S7; Validated
GCF_002591155.1_ASM259115v1	NZ_CP023965	Proteus vulgaris strain FDAARGOS_366 chromosome, complete genome	3	2199486-2199635	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL,DinG	Orphan	TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	50	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL,DinG	NA|194aa|up_7|NZ_CP023965.1_2191422_2192004_+,NA|88aa|down_9|NZ_CP023965.1_2215432_2215696_+	NA|86aa|up_9|NZ_CP023965.1_2189695_2189953_-	PRK10850, PRK10850, phosphocarrier protein Hpr	NA|318aa|up_8|NZ_CP023965.1_2190284_2191238_-	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|194aa|up_7|NZ_CP023965.1_2191422_2192004_+	NA	NA|257aa|up_6|NZ_CP023965.1_2192116_2192887_-	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|343aa|up_5|NZ_CP023965.1_2193110_2194139_+	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|676aa|up_4|NZ_CP023965.1_2194194_2196222_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|395aa|up_3|NZ_CP023965.1_2196450_2197635_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|72aa|up_2|NZ_CP023965.1_2197801_2198017_+	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor	NA|147aa|up_1|NZ_CP023965.1_2198019_2198460_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|251aa|up_0|NZ_CP023965.1_2198643_2199396_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|473aa|down_0|NZ_CP023965.1_2199791_2201210_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|101aa|down_1|NZ_CP023965.1_2204469_2204772_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|319aa|down_2|NZ_CP023965.1_2205366_2206323_-	cd01142, TroA_e, Periplasmic binding protein TroA_e	NA|260aa|down_3|NZ_CP023965.1_2206457_2207237_-	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|193aa|down_4|NZ_CP023965.1_2207233_2207812_-	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|760aa|down_5|NZ_CP023965.1_2207826_2210106_-	PRK15488, PRK15488, thiosulfate reductase PhsA; Provisional	NA|268aa|down_6|NZ_CP023965.1_2210978_2211782_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|259aa|down_7|NZ_CP023965.1_2211886_2212663_+	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|628aa|down_8|NZ_CP023965.1_2213549_2215433_+	pfam03515, Cloacin, Colicin-like bacteriocin tRNase domain	NA|88aa|down_9|NZ_CP023965.1_2215432_2215696_+	NA
GCF_002591155.1_ASM259115v1	NZ_CP023965	Proteus vulgaris strain FDAARGOS_366 chromosome, complete genome	4	2384952-2385033	4	CRISPRCasFinder	no		DEDDh,cas3,csa3,WYL,DinG	Orphan	TACTCGTCATACTTCAAGCTGTAG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,WYL,DinG	NA,NA	NA|569aa|up_9|NZ_CP023965.1_2373596_2375303_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|549aa|up_8|NZ_CP023965.1_2375362_2377009_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|286aa|up_7|NZ_CP023965.1_2377047_2377905_+	PRK10611, PRK10611, protein-glutamate O-methyltransferase CheR	NA|351aa|up_6|NZ_CP023965.1_2377897_2378950_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|130aa|up_5|NZ_CP023965.1_2379009_2379399_+	PRK10610, PRK10610, chemotaxis protein CheY	NA|219aa|up_4|NZ_CP023965.1_2379408_2380065_+	PRK11166, PRK11166, chemotaxis regulator CheZ; Provisional	NA|383aa|up_3|NZ_CP023965.1_2380487_2381636_+	PRK12468, flhB, flagellar biosynthesis protein FlhB; Reviewed	NA|697aa|up_2|NZ_CP023965.1_2381628_2383719_+	PRK06012, flhA, flagellar type III secretion system protein FlhA	NA|147aa|up_1|NZ_CP023965.1_2384068_2384509_-	COG3418, COG3418, Flagellar biosynthesis/type III secretory pathway chaperone [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones]	NA|100aa|up_0|NZ_CP023965.1_2384522_2384822_-	PRK10810, PRK10810, anti-sigma-28 factor FlgM	NA|219aa|down_0|NZ_CP023965.1_2385276_2385933_-	PRK07018, flgA, flagellar basal body P-ring formation protein FlgA	NA|137aa|down_1|NZ_CP023965.1_2386142_2386553_+	PRK05680, flgB, flagellar basal body rod protein FlgB; Reviewed	NA|135aa|down_2|NZ_CP023965.1_2386563_2386968_+	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed	NA|277aa|down_3|NZ_CP023965.1_2386980_2387811_+	PRK06655, flgD, flagellar hook assembly protein FlgD	NA|409aa|down_4|NZ_CP023965.1_2387838_2389065_+	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|252aa|down_5|NZ_CP023965.1_2389086_2389842_+	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|261aa|down_6|NZ_CP023965.1_2389861_2390644_+	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|248aa|down_7|NZ_CP023965.1_2390707_2391451_+	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|369aa|down_8|NZ_CP023965.1_2391465_2392572_+	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|329aa|down_9|NZ_CP023965.1_2392571_2393558_+	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ
