assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002591135.1_ASM259113v1	NZ_CP023960	Escherichia coli strain FDAARGOS_448 chromosome, complete genome	1	2858812-2858961	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,c2c9_V-U4,RT,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,c2c9_V-U4,RT,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|532aa|down_6|NZ_CP023960.1_2866058_2867654_-	NA|340aa|up_9|NZ_CP023960.1_2847004_2848024_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|188aa|up_8|NZ_CP023960.1_2848027_2848591_-	PRK09825, idnK, gluconokinase	NA|344aa|up_7|NZ_CP023960.1_2848807_2849839_+	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|255aa|up_6|NZ_CP023960.1_2849862_2850627_+	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|440aa|up_5|NZ_CP023960.1_2850689_2852009_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|333aa|up_4|NZ_CP023960.1_2852075_2853074_+	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|501aa|up_3|NZ_CP023960.1_2853151_2854654_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP023960.1_2854814_2855897_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP023960.1_2855896_2856997_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP023960.1_2857263_2858775_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP023960.1_2859128_2859572_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP023960.1_2859571_2862427_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP023960.1_2862482_2863679_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP023960.1_2863871_2864375_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP023960.1_2864420_2864837_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP023960.1_2864998_2866003_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|532aa|down_6|NZ_CP023960.1_2866058_2867654_-	NA	NA|151aa|down_7|NZ_CP023960.1_2867776_2868229_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP023960.1_2868373_2868967_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_9|NZ_CP023960.1_2869037_2869751_+	PRK12742, PRK12742, SDR family oxidoreductase
GCF_002591135.1_ASM259113v1	NZ_CP023960	Escherichia coli strain FDAARGOS_448 chromosome, complete genome	2	4690360-4690693	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,DEDDh,DinG,c2c9_V-U4,RT,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	4,5,5	5	Orphan	cas3,DEDDh,DinG,c2c9_V-U4,RT,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|919aa|up_9|NZ_CP023960.1_4676953_4679710_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP023960.1_4679766_4681068_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP023960.1_4681115_4683350_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP023960.1_4683427_4683676_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP023960.1_4683675_4684011_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP023960.1_4684082_4684874_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP023960.1_4685101_4686739_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP023960.1_4686825_4688124_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|NZ_CP023960.1_4688183_4689056_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|NZ_CP023960.1_4689349_4690021_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP023960.1_4691330_4692809_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP023960.1_4692835_4694113_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP023960.1_4694431_4695217_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP023960.1_4695286_4696741_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP023960.1_4696762_4698172_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP023960.1_4698149_4698929_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP023960.1_4698925_4699786_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|450aa|down_7|NZ_CP023960.1_4699885_4701234_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|192aa|down_8|NZ_CP023960.1_4701368_4701944_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_9|NZ_CP023960.1_4701960_4702221_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCF_002591135.1_ASM259113v1	NZ_CP023960	Escherichia coli strain FDAARGOS_448 chromosome, complete genome	3	4717831-4718405	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,DEDDh,DinG,c2c9_V-U4,RT,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAA,GTGTTCCCCGCGCCAGCGGGGATAAA,GTGTTCCCCGCGCCAGCGGGGATAAA	26,26,26	0	0	NA	NA	I-E:I-E:I-E	8,9,9	9	TypeI-E	cas3,DEDDh,DinG,c2c9_V-U4,RT,WYL,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|245aa|up_9|NZ_CP023960.1_4707826_4708561_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP023960.1_4708825_4708978_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP023960.1_4709172_4711872_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP023960.1_4711969_4713532_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP023960.1_4713528_4714065_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP023960.1_4714079_4715135_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP023960.1_4715145_4715892_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP023960.1_4715873_4716524_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP023960.1_4716520_4717444_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP023960.1_4717440_4717734_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP023960.1_4718489_4719527_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP023960.1_4719778_4720687_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP023960.1_4720688_4722116_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP023960.1_4722115_4722721_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP023960.1_4722770_4723094_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP023960.1_4723287_4723599_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP023960.1_4723617_4724328_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP023960.1_4724327_4724807_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP023960.1_4724803_4725853_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP023960.1_4725833_4726595_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
