assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	1	335370-335942	1	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGCNCCGCCGNNGCCG	21	3	3	335790-335813|335835-335867|335889-335921	NZ_CP023628.1_338571-338594|NZ_CP023628.1_338598-338630|NZ_CP023628.1_338652-338684	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP023628.1_333144_333327_-,NA	NA|398aa|up_9|NZ_CP023628.1_323322_324516_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP023628.1_324551_326234_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP023628.1_326250_328446_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP023628.1_328559_329693_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP023628.1_329689_330310_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP023628.1_330406_330988_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP023628.1_330917_331643_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP023628.1_331732_332653_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP023628.1_332692_333121_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP023628.1_333144_333327_-	NA	NA|838aa|down_0|NZ_CP023628.1_336544_339058_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP023628.1_339348_340959_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP023628.1_340982_341891_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP023628.1_342114_344010_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP023628.1_344006_345623_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP023628.1_345619_349612_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP023628.1_349608_349917_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP023628.1_349919_351461_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP023628.1_351509_351803_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP023628.1_351832_352123_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	2	366448-367146	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	366736-366777|366811-366843	NZ_CP023628.1_374767-374808|NZ_CP023628.1_373582-373614	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP023628.1_363460_363763_+,NA|161aa|down_1|NZ_CP023628.1_376556_377039_-,NA|410aa|down_5|NZ_CP023628.1_379155_380385_+	NA|262aa|up_9|NZ_CP023628.1_358155_358941_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP023628.1_358929_359733_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP023628.1_359742_361140_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP023628.1_361318_363094_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP023628.1_363236_363464_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP023628.1_363460_363763_+	NA	NA|74aa|up_3|NZ_CP023628.1_363810_364032_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP023628.1_364028_364454_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP023628.1_364589_365222_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP023628.1_365218_366127_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP023628.1_375897_376569_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP023628.1_376556_377039_-	NA	NA|239aa|down_2|NZ_CP023628.1_377096_377813_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP023628.1_377914_378571_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP023628.1_378640_379132_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP023628.1_379155_380385_+	NA	NA|621aa|down_6|NZ_CP023628.1_380539_382402_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP023628.1_382473_382860_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP023628.1_382862_383525_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP023628.1_383585_384470_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	3	631248-631385	2	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGACCACGCCGGTG	18	2	3	631266-631283|631266-631283|631350-631367	NZ_CP023628.1_22466-22483|NZ_CP023628.1_1412048-1412065|NZ_CP023628.1_973213-973230	NA	3	3	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|54aa|up_7|NZ_CP023628.1_622086_622248_-,NA|478aa|up_0|NZ_CP023628.1_628263_629697_-,NA|450aa|down_2|NZ_CP023628.1_633020_634370_-,NA|93aa|down_5|NZ_CP023628.1_635900_636179_-	NA|325aa|up_9|NZ_CP023628.1_619856_620831_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|406aa|up_8|NZ_CP023628.1_620872_622090_+	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|54aa|up_7|NZ_CP023628.1_622086_622248_-	NA	NA|106aa|up_6|NZ_CP023628.1_622294_622612_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|595aa|up_5|NZ_CP023628.1_622758_624543_+	pfam00934, PE, PE family	NA|336aa|up_4|NZ_CP023628.1_624438_625446_-	TIGR00747, 3-oxoacyl-_synthase_3, 3-oxoacyl-(acyl-carrier-protein) synthase III	NA|293aa|up_3|NZ_CP023628.1_625527_626406_-	TIGR00751, 14-dihydroxy-2-naphthoate_octaprenyltransferase, 1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA|265aa|up_2|NZ_CP023628.1_626422_627217_+	PRK07823, PRK07823, S-methyl-5'-thioadenosine phosphorylase	NA|347aa|up_1|NZ_CP023628.1_627213_628254_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|478aa|up_0|NZ_CP023628.1_628263_629697_-	NA	NA|211aa|down_0|NZ_CP023628.1_631708_632341_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|221aa|down_1|NZ_CP023628.1_632337_633000_+	COG3222, COG3222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_2|NZ_CP023628.1_633020_634370_-	NA	NA|381aa|down_3|NZ_CP023628.1_634381_635524_-	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase	NA|101aa|down_4|NZ_CP023628.1_635538_635841_-	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|93aa|down_5|NZ_CP023628.1_635900_636179_-	NA	NA|418aa|down_6|NZ_CP023628.1_636175_637429_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|129aa|down_7|NZ_CP023628.1_637548_637935_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|295aa|down_8|NZ_CP023628.1_637997_638882_-	PRK05866, PRK05866, SDR family oxidoreductase	NA|301aa|down_9|NZ_CP023628.1_638977_639880_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	4	691997-692073	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP023628.1_677892_678300_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP023628.1_678359_679046_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP023628.1_679199_681833_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP023628.1_681855_684243_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP023628.1_684380_685103_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP023628.1_685099_685897_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP023628.1_685898_686786_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP023628.1_686791_688006_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_1|NZ_CP023628.1_689029_690475_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|479aa|up_0|NZ_CP023628.1_690471_691908_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP023628.1_693208_694759_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP023628.1_694810_695203_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP023628.1_695199_695457_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP023628.1_695639_696875_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP023628.1_697125_697539_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP023628.1_697535_697772_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP023628.1_697875_698382_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP023628.1_698495_698966_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP023628.1_699009_699771_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP023628.1_699827_700139_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	5	926593-927540	3	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	927376-927411|927376-927411|927376-927411	NZ_CP023628.1_675094-675059|NZ_CP023628.1_1213727-1213762|NZ_CP023628.1_2423767-2423732	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP023628.1_931541_932093_-,NA|81aa|down_8|NZ_CP023628.1_937556_937799_+	NA|685aa|up_9|NZ_CP023628.1_914229_916284_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP023628.1_916449_917619_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP023628.1_917706_918723_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP023628.1_918884_919526_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP023628.1_919606_920662_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP023628.1_920713_921106_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP023628.1_921163_921586_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP023628.1_921547_921838_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP023628.1_921942_922848_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP023628.1_922866_923682_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|880aa|down_0|NZ_CP023628.1_927809_930449_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP023628.1_930916_931561_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP023628.1_931541_932093_-	NA	NA|218aa|down_3|NZ_CP023628.1_932242_932896_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP023628.1_932966_933995_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP023628.1_934683_935454_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP023628.1_935540_936353_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP023628.1_936420_937281_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP023628.1_937556_937799_+	NA	NA|431aa|down_9|NZ_CP023628.1_938075_939368_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	6	1191294-1191402	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP023628.1_1180661_1182293_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP023628.1_1182368_1183433_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP023628.1_1183485_1183959_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP023628.1_1183992_1184856_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP023628.1_1184860_1185718_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP023628.1_1185718_1186801_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP023628.1_1186881_1187301_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP023628.1_1187412_1187979_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP023628.1_1187975_1188371_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP023628.1_1188398_1190402_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP023628.1_1192487_1194251_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP023628.1_1194247_1195021_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP023628.1_1195032_1196070_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP023628.1_1196256_1197093_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP023628.1_1197208_1198060_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP023628.1_1198133_1199351_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP023628.1_1199403_1200348_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP023628.1_1200570_1201638_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP023628.1_1201694_1203089_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP023628.1_1203290_1204013_+	pfam06271, RDD, RDD family
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	7	1211928-1212784	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	72	1212311-1212332|1212356-1212371|1212494-1212515|1212494-1212515|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629|1212611-1212629	NZ_CP023628.1_2960525-2960504|NZ_CP023628.1_2088611-2088596|NZ_CP023628.1_837406-837427|NZ_CP023628.1_1217622-1217643|NZ_CP023628.1_674758-674740|NZ_CP023628.1_840468-840486|NZ_CP023628.1_1213454-1213472|NZ_CP023628.1_1217595-1217613|NZ_CP023628.1_1217667-1217685|NZ_CP023628.1_1630684-1630666|NZ_CP023628.1_1633510-1633492|NZ_CP023628.1_1636905-1636887|NZ_CP023628.1_1990820-1990802|NZ_CP023628.1_2061539-2061521|NZ_CP023628.1_2061986-2061968|NZ_CP023628.1_2062085-2062067|NZ_CP023628.1_2802074-2802056|NZ_CP023628.1_2805602-2805584|NZ_CP023628.1_150165-150183|NZ_CP023628.1_333767-333749|NZ_CP023628.1_335186-335168|NZ_CP023628.1_337988-337970|NZ_CP023628.1_338117-338099|NZ_CP023628.1_338384-338366|NZ_CP023628.1_338413-338431|NZ_CP023628.1_338507-338489|NZ_CP023628.1_363038-363020|NZ_CP023628.1_443412-443394|NZ_CP023628.1_546756-546738|NZ_CP023628.1_623949-623967|NZ_CP023628.1_624171-624189|NZ_CP023628.1_673924-673906|NZ_CP023628.1_840189-840207|NZ_CP023628.1_1090956-1090974|NZ_CP023628.1_1091604-1091622|NZ_CP023628.1_1095663-1095645|NZ_CP023628.1_1212983-1213001|NZ_CP023628.1_1213373-1213391|NZ_CP023628.1_1218015-1218033|NZ_CP023628.1_1489192-1489174|NZ_CP023628.1_1618648-1618630|NZ_CP023628.1_1619101-1619083|NZ_CP023628.1_1636023-1636005|NZ_CP023628.1_1636032-1636014|NZ_CP023628.1_1864311-1864293|NZ_CP023628.1_1864839-1864821|NZ_CP023628.1_1990094-1990076|NZ_CP023628.1_2001456-2001474|NZ_CP023628.1_2088809-2088791|NZ_CP023628.1_2303488-2303470|NZ_CP023628.1_2356934-2356916|NZ_CP023628.1_2419593-2419611|NZ_CP023628.1_2423680-2423662|NZ_CP023628.1_2569172-2569154|NZ_CP023628.1_2693467-2693485|NZ_CP023628.1_2795389-2795371|NZ_CP023628.1_2795971-2795953|NZ_CP023628.1_3054562-3054580|NZ_CP023628.1_3054661-3054679|NZ_CP023628.1_3705463-3705481|NZ_CP023628.1_3737441-3737423|NZ_CP023628.1_3738065-3738047|NZ_CP023628.1_3738308-3738290|NZ_CP023628.1_3738441-3738423|NZ_CP023628.1_3802304-3802322|NZ_CP023628.1_3802487-3802505|NZ_CP023628.1_3802655-3802673|NZ_CP023628.1_3930467-3930485|NZ_CP023628.1_3932197-3932215|NZ_CP023628.1_3940704-3940722|NZ_CP023628.1_4031682-4031664|NZ_CP023628.1_4094208-4094226	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP023628.1_1207360_1207627_+,NA|61aa|down_3|NZ_CP023628.1_1215202_1215385_+,NA|35aa|down_4|NZ_CP023628.1_1215494_1215599_+	NA|465aa|up_9|NZ_CP023628.1_1201694_1203089_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP023628.1_1203290_1204013_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP023628.1_1204044_1205211_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP023628.1_1205281_1205776_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP023628.1_1205961_1206396_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP023628.1_1206497_1207364_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP023628.1_1207360_1207627_+	NA	NA|674aa|up_2|NZ_CP023628.1_1207613_1209635_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP023628.1_1209733_1210462_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP023628.1_1210572_1211361_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP023628.1_1214017_1214338_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP023628.1_1214490_1214925_+	pfam00934, PE, PE family	NA|55aa|down_2|NZ_CP023628.1_1215026_1215191_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP023628.1_1215202_1215385_+	NA	NA|35aa|down_4|NZ_CP023628.1_1215494_1215599_+	NA	NA|152aa|down_5|NZ_CP023628.1_1215576_1216032_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP023628.1_1216446_1219008_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP023628.1_1219225_1220164_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP023628.1_1220551_1221832_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP023628.1_1221936_1222764_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	8	1572167-1573239	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP023628.1_1563930_1564248_+,NA	NA|103aa|up_9|NZ_CP023628.1_1561445_1561754_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP023628.1_1561750_1563370_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP023628.1_1563930_1564248_+	NA	NA|209aa|up_6|NZ_CP023628.1_1564382_1565009_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP023628.1_1565074_1565407_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP023628.1_1565422_1566679_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP023628.1_1566806_1568018_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP023628.1_1568090_1569569_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP023628.1_1569565_1570951_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP023628.1_1571028_1572063_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP023628.1_1574092_1574494_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP023628.1_1574490_1574748_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP023628.1_1574830_1575790_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP023628.1_1575814_1576777_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP023628.1_1576910_1577513_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP023628.1_1577593_1579561_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP023628.1_1579578_1580403_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP023628.1_1580571_1581054_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP023628.1_1581125_1581950_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP023628.1_1582146_1583085_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	9	1636601-1636827	1	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGCGGCGCCGTTGGCGCCGTTGCCGCCGGCGCCGCCGTTGCCGCCG	47	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_8|NZ_CP023628.1_1623109_1623223_-,NA|137aa|up_7|NZ_CP023628.1_1623272_1623683_-,NA|288aa|down_2|NZ_CP023628.1_1640665_1641529_+	NA|162aa|up_9|NZ_CP023628.1_1622192_1622678_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_8|NZ_CP023628.1_1623109_1623223_-	NA	NA|137aa|up_7|NZ_CP023628.1_1623272_1623683_-	NA	NA|248aa|up_6|NZ_CP023628.1_1623699_1624443_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|304aa|up_5|NZ_CP023628.1_1624439_1625351_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_4|NZ_CP023628.1_1625403_1626948_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_3|NZ_CP023628.1_1626944_1628066_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_2|NZ_CP023628.1_1628082_1630185_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|1330aa|up_1|NZ_CP023628.1_1630623_1634613_-	pfam00934, PE, PE family	NA|309aa|up_0|NZ_CP023628.1_1635014_1635941_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NZ_CP023628.1_1638366_1639632_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NZ_CP023628.1_1639659_1640646_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP023628.1_1640665_1641529_+	NA	NA|311aa|down_3|NZ_CP023628.1_1641478_1642411_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NZ_CP023628.1_1642522_1643308_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NZ_CP023628.1_1643304_1644246_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NZ_CP023628.1_1644348_1646124_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NZ_CP023628.1_1646171_1646978_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NZ_CP023628.1_1646974_1649515_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NZ_CP023628.1_1649511_1650705_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	10	2088281-2088535	4	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2088362-2088379|2088362-2088379|2088452-2088469	NZ_CP023628.1_401063-401046|NZ_CP023628.1_607404-607387|NZ_CP023628.1_3450163-3450146	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP023628.1_2087640_2087904_-,NA	NA|165aa|up_9|NZ_CP023628.1_2073934_2074429_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP023628.1_2074832_2075510_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP023628.1_2075868_2078694_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP023628.1_2078920_2079781_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP023628.1_2079821_2080688_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP023628.1_2080692_2082579_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP023628.1_2082594_2084628_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP023628.1_2084747_2086973_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP023628.1_2087248_2087644_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP023628.1_2087640_2087904_-	NA	NA|346aa|down_0|NZ_CP023628.1_2089672_2090710_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP023628.1_2090709_2092077_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP023628.1_2092250_2093687_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP023628.1_2093722_2095174_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP023628.1_2095203_2096154_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP023628.1_2096168_2096585_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP023628.1_2096862_2097285_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP023628.1_2097333_2097636_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP023628.1_2097632_2097947_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP023628.1_2097946_2099680_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	11	2163374-2163478	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CAACCCAAACGGATTAATCGCGAAACCAGGGATCGT	36	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|157aa|up_9|NZ_CP023628.1_2152421_2152892_-,NA|136aa|up_1|NZ_CP023628.1_2159917_2160325_-,NA|127aa|down_6|NZ_CP023628.1_2176547_2176928_-	NA|157aa|up_9|NZ_CP023628.1_2152421_2152892_-	NA	NA|216aa|up_8|NZ_CP023628.1_2153231_2153879_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_7|NZ_CP023628.1_2153885_2156108_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_6|NZ_CP023628.1_2156145_2156589_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_5|NZ_CP023628.1_2156702_2157296_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_4|NZ_CP023628.1_2157378_2157984_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_3|NZ_CP023628.1_2158083_2159088_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_2|NZ_CP023628.1_2159187_2159940_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_1|NZ_CP023628.1_2159917_2160325_-	NA	NA|767aa|up_0|NZ_CP023628.1_2160459_2162760_+	PLN02892, PLN02892, isocitrate lyase	NA|988aa|down_0|NZ_CP023628.1_2167646_2170610_-	pfam00823, PPE, PPE family	NA|155aa|down_1|NZ_CP023628.1_2171058_2171523_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_2|NZ_CP023628.1_2171620_2172484_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_3|NZ_CP023628.1_2172521_2173793_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_4|NZ_CP023628.1_2174064_2175180_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_5|NZ_CP023628.1_2175170_2176511_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_6|NZ_CP023628.1_2176547_2176928_-	NA	NA|621aa|down_7|NZ_CP023628.1_2177084_2178947_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_8|NZ_CP023628.1_2178954_2179434_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_9|NZ_CP023628.1_2179670_2180444_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	12	2168812-2169031	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023628.1_2159917_2160325_-,NA|127aa|down_5|NZ_CP023628.1_2176547_2176928_-	NA|216aa|up_9|NZ_CP023628.1_2153231_2153879_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023628.1_2153885_2156108_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023628.1_2156145_2156589_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023628.1_2156702_2157296_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023628.1_2157378_2157984_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023628.1_2158083_2159088_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023628.1_2159187_2159940_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023628.1_2159917_2160325_-	NA	NA|767aa|up_1|NZ_CP023628.1_2160459_2162760_+	PLN02892, PLN02892, isocitrate lyase	NA|1460aa|up_0|NZ_CP023628.1_2162929_2167309_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP023628.1_2171058_2171523_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP023628.1_2171620_2172484_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP023628.1_2172521_2173793_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP023628.1_2174064_2175180_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP023628.1_2175170_2176511_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP023628.1_2176547_2176928_-	NA	NA|621aa|down_6|NZ_CP023628.1_2177084_2178947_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP023628.1_2178954_2179434_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP023628.1_2179670_2180444_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|215aa|down_9|NZ_CP023628.1_2181237_2181882_-	TIGR03085, TIGR03085, TIGR03085 family protein
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	13	3119153-3120507	2,8,5	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-A,Type III-C,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	13,17,18	18	TypeIII-B,TypeIII-A,TypeIII-C,TypeIII-D	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP023628.1_3112432_3112687_-,NA|135aa|up_7|NZ_CP023628.1_3112834_3113239_+,NA|64aa|up_6|NZ_CP023628.1_3113235_3113427_+,NA|86aa|up_4|NZ_CP023628.1_3115013_3115271_+,NA|104aa|up_3|NZ_CP023628.1_3115375_3115687_+,NA|203aa|up_2|NZ_CP023628.1_3116106_3116715_+,NA	NA|92aa|up_9|NZ_CP023628.1_3111981_3112257_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP023628.1_3112432_3112687_-	NA	NA|135aa|up_7|NZ_CP023628.1_3112834_3113239_+	NA	NA|64aa|up_6|NZ_CP023628.1_3113235_3113427_+	NA	NA|385aa|up_5|NZ_CP023628.1_3113625_3114780_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP023628.1_3115013_3115271_+	NA	NA|104aa|up_3|NZ_CP023628.1_3115375_3115687_+	NA	NA|203aa|up_2|NZ_CP023628.1_3116106_3116715_+	NA	NA|470aa|up_1|NZ_CP023628.1_3116785_3118195_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP023628.1_3118191_3119004_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP023628.1_3120529_3121791_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP023628.1_3123588_3123930_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP023628.1_3123930_3124947_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP023628.1_3124959_3126108_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP023628.1_3126203_3127331_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP023628.1_3127327_3128236_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP023628.1_3128216_3128927_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP023628.1_3128936_3129311_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_8|NZ_CP023628.1_3129307_3131737_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP023628.1_3131733_3132456_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	14	3121826-3123540	9,6,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-A,Type III-C,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGA	36,36,35	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-B,TypeIII-A,TypeIII-C,TypeIII-D	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP023628.1_3112432_3112687_-,NA|135aa|up_8|NZ_CP023628.1_3112834_3113239_+,NA|64aa|up_7|NZ_CP023628.1_3113235_3113427_+,NA|86aa|up_5|NZ_CP023628.1_3115013_3115271_+,NA|104aa|up_4|NZ_CP023628.1_3115375_3115687_+,NA|203aa|up_3|NZ_CP023628.1_3116106_3116715_+,NA	NA|85aa|up_9|NZ_CP023628.1_3112432_3112687_-	NA	NA|135aa|up_8|NZ_CP023628.1_3112834_3113239_+	NA	NA|64aa|up_7|NZ_CP023628.1_3113235_3113427_+	NA	NA|385aa|up_6|NZ_CP023628.1_3113625_3114780_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP023628.1_3115013_3115271_+	NA	NA|104aa|up_4|NZ_CP023628.1_3115375_3115687_+	NA	NA|203aa|up_3|NZ_CP023628.1_3116106_3116715_+	NA	NA|470aa|up_2|NZ_CP023628.1_3116785_3118195_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP023628.1_3118191_3119004_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP023628.1_3120529_3121791_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP023628.1_3123588_3123930_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP023628.1_3123930_3124947_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP023628.1_3124959_3126108_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP023628.1_3126203_3127331_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP023628.1_3127327_3128236_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP023628.1_3128216_3128927_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP023628.1_3128936_3129311_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_7|NZ_CP023628.1_3129307_3131737_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP023628.1_3131733_3132456_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP023628.1_3132855_3133401_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	15	3740635-3741176	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP023628.1_3755277_3755565_-,NA|87aa|down_9|NZ_CP023628.1_3768685_3768946_-	NA|282aa|up_9|NZ_CP023628.1_3719886_3720732_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP023628.1_3721206_3721647_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP023628.1_3721680_3722550_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP023628.1_3722570_3723581_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP023628.1_3723865_3724498_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP023628.1_3724564_3725794_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP023628.1_3726076_3727426_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP023628.1_3727437_3728577_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP023628.1_3728573_3729305_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_0|NZ_CP023628.1_3729313_3736885_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP023628.1_3743147_3743405_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP023628.1_3743660_3753134_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP023628.1_3753759_3754206_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP023628.1_3754242_3754983_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP023628.1_3755277_3755565_-	NA	NA|3717aa|down_5|NZ_CP023628.1_3755901_3767052_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP023628.1_3767295_3768090_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP023628.1_3768171_3768543_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_8|NZ_CP023628.1_3768440_3768659_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP023628.1_3768685_3768946_-	NA
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	16	3948312-3950063	8	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCACCGGCGGCNNCGGCGGNNNCGGCGG	36	2	9	3948903-3948938|3948903-3948938|3948903-3948938|3948903-3948938|3948903-3948938|3949794-3949820|3949794-3949820|3949794-3949820|3949794-3949820	NZ_CP023628.1_3947019-3947054|NZ_CP023628.1_3947361-3947396|NZ_CP023628.1_3947952-3947987|NZ_CP023628.1_3948303-3948338|NZ_CP023628.1_3932752-3932787|NZ_CP023628.1_361978-362004|NZ_CP023628.1_3941205-3941231|NZ_CP023628.1_3941541-3941567|NZ_CP023628.1_3941887-3941913	NA	21	21	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP023628.1_3953378_3954218_+	NA|318aa|up_9|NZ_CP023628.1_3921034_3921988_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP023628.1_3922012_3922204_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP023628.1_3922418_3923621_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP023628.1_3923645_3924767_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP023628.1_3924837_3926346_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1382aa|up_4|NZ_CP023628.1_3926516_3930662_+	pfam00934, PE, PE family	NA|1902aa|up_3|NZ_CP023628.1_3930952_3936658_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP023628.1_3936824_3938372_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP023628.1_3938368_3939205_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP023628.1_3945039_3945696_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP023628.1_3950771_3952418_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP023628.1_3952491_3953283_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP023628.1_3953378_3954218_+	NA	NA|399aa|down_3|NZ_CP023628.1_3954272_3955469_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP023628.1_3955497_3956208_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP023628.1_3956272_3957316_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP023628.1_3957468_3958380_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP023628.1_3958395_3959460_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|344aa|down_8|NZ_CP023628.1_3960702_3961734_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD	NA|175aa|down_9|NZ_CP023628.1_3961747_3962272_-	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]
GCF_002447975.1_ASM244797v1	NZ_CP023628	Mycobacterium tuberculosis strain MDRMA2082 chromosome, complete genome	17	4110626-4110714	10	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP023628.1_4101212_4101983_-,NA|119aa|up_3|NZ_CP023628.1_4107117_4107474_+,NA|52aa|up_2|NZ_CP023628.1_4107573_4107729_+,NA|233aa|up_0|NZ_CP023628.1_4109730_4110429_-,NA|126aa|down_6|NZ_CP023628.1_4115949_4116327_+	NA|288aa|up_9|NZ_CP023628.1_4099594_4100458_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP023628.1_4101212_4101983_-	NA	NA|549aa|up_7|NZ_CP023628.1_4101979_4103626_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP023628.1_4103622_4104486_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP023628.1_4104478_4105405_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP023628.1_4105406_4107032_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP023628.1_4107117_4107474_+	NA	NA|52aa|up_2|NZ_CP023628.1_4107573_4107729_+	NA	NA|652aa|up_1|NZ_CP023628.1_4107739_4109695_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP023628.1_4109730_4110429_-	NA	NA|173aa|down_0|NZ_CP023628.1_4110774_4111293_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP023628.1_4111293_4112277_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP023628.1_4112269_4113463_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP023628.1_4113468_4114290_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP023628.1_4114421_4115105_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP023628.1_4115104_4115842_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP023628.1_4115949_4116327_+	NA	NA|225aa|down_7|NZ_CP023628.1_4116425_4117100_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP023628.1_4117203_4117998_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP023628.1_4118004_4118460_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
