The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023617	Mycobacterium tuberculosis strain LN3672 chromosome, complete genome	4411335	2941140	2976506	4411335	capsid,integrase,transposase,head,tRNA,terminase,protease	Tupanvirus(11.11%)	41	2969941:2969968	2980923:2980950
WP_096874167.1|2941140_2943219_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	1.5e-104
WP_003413487.1|2943327_2943555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943551_2944937_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945281_2945782_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945798_2946239_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946385_2947063_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2947047_2947401_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947413_2947839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947835_2948510_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948587_2949409_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_096874168.1|2949544_2950438_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950440_2951259_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951273_2952455_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952513_2952945_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953458_2954700_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2955009_2955372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955718_2956843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956844_2957384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957523_2958822_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958860_2959142_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959286_2959772_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959798_2960056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2960056_2962393_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962421_2962664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962664_2963342_+	membrane protein	NA	NA	NA	NA	NA
WP_012054325.1|2963537_2964194_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964356_2964803_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964977_2965310_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965429_2965789_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965890_2966349_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966484_2966865_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966861_2968358_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968547_2968784_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968856_2969030_+	hypothetical protein	NA	NA	NA	NA	NA
2969941:2969968	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2970074_2970506_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970502_2971501_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971514_2971979_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2972111_2973372_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973746_2975186_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975193_2975727_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_072464513.1|2975879_2976506_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980923:2980950	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023617	Mycobacterium tuberculosis strain LN3672 chromosome, complete genome	4411335	3710298	3796218	4411335	tRNA,transposase	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710298_3711559_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711614_3711776_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711797_3713327_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713259_3714198_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714206_3715574_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715642_3716860_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716955_3718464_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718460_3719612_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719802_3720648_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721122_3721563_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721596_3722466_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722486_3723497_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723781_3724414_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724480_3725710_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725992_3727342_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727353_3728493_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728489_3729221_+	methyltransferase	NA	NA	NA	NA	NA
WP_023637497.1|3729229_3736801_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3743054_3743312_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743567_3753041_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753666_3754113_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754149_3754890_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755184_3755472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755808_3766959_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767202_3767997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3768078_3768450_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768347_3768566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768592_3768853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768967_3769357_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769370_3769664_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769660_3770506_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770629_3770905_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770901_3771159_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_012054356.1|3771200_3772391_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772507_3772876_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772872_3773424_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773430_3774012_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773992_3774361_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774338_3774731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774727_3777358_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777593_3778058_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778424_3780191_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780191_3780836_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780834_3781269_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781357_3784597_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784788_3786129_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786170_3787346_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787399_3787504_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787582_3788224_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788224_3788473_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_012054357.1|3788477_3789905_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3790012_3790666_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790704_3792210_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792214_3793105_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793113_3794724_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794668_3794914_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794956_3796218_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
