assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	1	333648-334446	1	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGNGCCGCCGGNN	18	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP023616.1_333163_333346_-,NA	NA|398aa|up_9|NZ_CP023616.1_323341_324535_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP023616.1_324570_326253_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP023616.1_326269_328465_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP023616.1_328578_329712_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP023616.1_329708_330329_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP023616.1_330425_331007_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP023616.1_330936_331662_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP023616.1_331751_332672_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP023616.1_332711_333140_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP023616.1_333163_333346_-	NA	NA|838aa|down_0|NZ_CP023616.1_336563_339077_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP023616.1_339367_340978_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP023616.1_341001_341910_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP023616.1_342133_344029_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP023616.1_344025_345642_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP023616.1_345638_349631_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP023616.1_349627_349936_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP023616.1_349938_351480_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP023616.1_351528_351822_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP023616.1_351851_352142_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	2	338108-338330	1	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	ATCCGCCGCTACCGCCGGTGCCGCCGGCGCCGAACAGCCCGCC	43	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_1|NZ_CP023616.1_333163_333346_-,NA	NA|561aa|up_9|NZ_CP023616.1_324570_326253_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_8|NZ_CP023616.1_326269_328465_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_7|NZ_CP023616.1_328578_329712_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_6|NZ_CP023616.1_329708_330329_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_5|NZ_CP023616.1_330425_331007_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_4|NZ_CP023616.1_330936_331662_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_3|NZ_CP023616.1_331751_332672_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_2|NZ_CP023616.1_332711_333140_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_1|NZ_CP023616.1_333163_333346_-	NA	NA|958aa|up_0|NZ_CP023616.1_333440_336314_-	pfam00934, PE, PE family	NA|537aa|down_0|NZ_CP023616.1_339367_340978_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP023616.1_341001_341910_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP023616.1_342133_344029_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP023616.1_344025_345642_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP023616.1_345638_349631_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP023616.1_349627_349936_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP023616.1_349938_351480_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP023616.1_351528_351822_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP023616.1_351851_352142_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP023616.1_352152_353040_+	pfam14011, ESX-1_EspG, EspG family
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	3	366467-367165	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	366755-366796|366830-366862	NZ_CP023616.1_374786-374827|NZ_CP023616.1_373601-373633	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP023616.1_363479_363782_+,NA|161aa|down_1|NZ_CP023616.1_376575_377058_-,NA|410aa|down_5|NZ_CP023616.1_379174_380404_+	NA|262aa|up_9|NZ_CP023616.1_358174_358960_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP023616.1_358948_359752_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP023616.1_359761_361159_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP023616.1_361337_363113_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP023616.1_363255_363483_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP023616.1_363479_363782_+	NA	NA|74aa|up_3|NZ_CP023616.1_363829_364051_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP023616.1_364047_364473_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP023616.1_364608_365241_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP023616.1_365237_366146_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP023616.1_375916_376588_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP023616.1_376575_377058_-	NA	NA|239aa|down_2|NZ_CP023616.1_377115_377832_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP023616.1_377933_378590_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP023616.1_378659_379151_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP023616.1_379174_380404_+	NA	NA|621aa|down_6|NZ_CP023616.1_380558_382421_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP023616.1_382492_382879_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP023616.1_382881_383544_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP023616.1_383604_384489_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	4	691996-692072	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP023616.1_677680_677896_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP023616.1_677892_678300_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP023616.1_678359_679046_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP023616.1_679199_681833_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP023616.1_681855_684243_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP023616.1_684380_685103_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP023616.1_685099_685897_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP023616.1_685898_686786_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP023616.1_686791_688006_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP023616.1_689029_690475_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP023616.1_693207_694758_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP023616.1_694809_695202_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP023616.1_695198_695456_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP023616.1_695638_696874_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP023616.1_697124_697538_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP023616.1_697534_697771_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP023616.1_697874_698381_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP023616.1_698494_698965_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP023616.1_699008_699770_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP023616.1_699826_700138_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	5	926573-927520	2	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGNGCCGGCGGNNCCGGCGG	21	1	3	927356-927391|927356-927391|927356-927391	NZ_CP023616.1_675099-675064|NZ_CP023616.1_1213710-1213745|NZ_CP023616.1_2423771-2423736	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP023616.1_931530_932082_-,NA|81aa|down_8|NZ_CP023616.1_937545_937788_+	NA|685aa|up_9|NZ_CP023616.1_914228_916283_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP023616.1_916448_917618_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP023616.1_917686_918703_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP023616.1_918864_919506_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP023616.1_919586_920642_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP023616.1_920693_921086_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP023616.1_921143_921566_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP023616.1_921527_921818_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP023616.1_921922_922828_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP023616.1_922846_923662_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|883aa|down_0|NZ_CP023616.1_927789_930438_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP023616.1_930905_931550_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP023616.1_931530_932082_-	NA	NA|218aa|down_3|NZ_CP023616.1_932231_932885_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP023616.1_932955_933984_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP023616.1_934672_935443_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP023616.1_935529_936342_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP023616.1_936409_937270_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP023616.1_937545_937788_+	NA	NA|431aa|down_9|NZ_CP023616.1_938064_939357_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	6	964533-964784	2	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGGTGGTGCCAGGTCGGCGGGCGCGGGTGGCGCCAGTTCGGCGGGCGCGGGTGGCGCCAGGT	63	1	1	964706-964761	NZ_CP023616.1_964834-964889	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|67aa|up_3|NZ_CP023616.1_962631_962832_+,NA	NA|158aa|up_9|NZ_CP023616.1_953208_953682_+	cd07819, SRPBCC_2, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|398aa|up_8|NZ_CP023616.1_953678_954872_-	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|404aa|up_7|NZ_CP023616.1_955028_956240_+	PRK08242, PRK08242, acetyl-CoA C-acetyltransferase	NA|721aa|up_6|NZ_CP023616.1_956244_958407_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|543aa|up_5|NZ_CP023616.1_958474_960103_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|757aa|up_4|NZ_CP023616.1_960293_962564_-	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|67aa|up_3|NZ_CP023616.1_962631_962832_+	NA	NA|168aa|up_2|NZ_CP023616.1_962841_963345_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|161aa|up_1|NZ_CP023616.1_963341_963824_+	cd00886, MogA_MoaB, MogA_MoaB family	NA|142aa|up_0|NZ_CP023616.1_963820_964246_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|93aa|down_0|NZ_CP023616.1_965934_966213_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|361aa|down_1|NZ_CP023616.1_966216_967299_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|130aa|down_2|NZ_CP023616.1_967295_967685_-	PRK11770, PRK11770, YccF domain-containing protein	NA|136aa|down_3|NZ_CP023616.1_967849_968257_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|609aa|down_4|NZ_CP023616.1_968375_970202_-	pfam00934, PE, PE family	NA|651aa|down_5|NZ_CP023616.1_970462_972415_+	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase	NA|387aa|down_6|NZ_CP023616.1_972503_973664_-	COG4398, COG4398, Uncharacterized protein conserved in bacteria [Function unknown]	NA|163aa|down_7|NZ_CP023616.1_973763_974252_-	pfam10969, DUF2771, Protein of unknown function (DUF2771)	NA|549aa|down_8|NZ_CP023616.1_974248_975895_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|263aa|down_9|NZ_CP023616.1_976032_976821_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	7	1191277-1191385	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP023616.1_1180644_1182276_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP023616.1_1182351_1183416_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP023616.1_1183468_1183942_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP023616.1_1183975_1184839_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP023616.1_1184843_1185701_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP023616.1_1185701_1186784_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP023616.1_1186864_1187284_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP023616.1_1187395_1187962_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP023616.1_1187958_1188354_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP023616.1_1188381_1190385_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP023616.1_1192470_1194234_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP023616.1_1194230_1195004_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP023616.1_1195015_1196053_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP023616.1_1196239_1197076_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP023616.1_1197191_1198043_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP023616.1_1198116_1199334_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP023616.1_1199386_1200331_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP023616.1_1200553_1201621_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP023616.1_1201677_1203072_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP023616.1_1203273_1203996_+	pfam06271, RDD, RDD family
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	8	1211911-1212767	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	74	1212294-1212315|1212339-1212354|1212477-1212498|1212477-1212498|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612|1212594-1212612	NZ_CP023616.1_2960536-2960515|NZ_CP023616.1_2088595-2088580|NZ_CP023616.1_837405-837426|NZ_CP023616.1_1217605-1217626|NZ_CP023616.1_1572788-1572770|NZ_CP023616.1_674763-674745|NZ_CP023616.1_840466-840484|NZ_CP023616.1_1213437-1213455|NZ_CP023616.1_1217578-1217596|NZ_CP023616.1_1217650-1217668|NZ_CP023616.1_1630660-1630642|NZ_CP023616.1_1633486-1633468|NZ_CP023616.1_1636881-1636863|NZ_CP023616.1_1990797-1990779|NZ_CP023616.1_2061523-2061505|NZ_CP023616.1_2061970-2061952|NZ_CP023616.1_2062069-2062051|NZ_CP023616.1_2802085-2802067|NZ_CP023616.1_2805613-2805595|NZ_CP023616.1_150185-150203|NZ_CP023616.1_335205-335187|NZ_CP023616.1_335658-335640|NZ_CP023616.1_335709-335691|NZ_CP023616.1_335718-335700|NZ_CP023616.1_338007-337989|NZ_CP023616.1_338403-338385|NZ_CP023616.1_338432-338450|NZ_CP023616.1_338526-338508|NZ_CP023616.1_363057-363039|NZ_CP023616.1_443431-443413|NZ_CP023616.1_546774-546756|NZ_CP023616.1_623964-623982|NZ_CP023616.1_624186-624204|NZ_CP023616.1_673929-673911|NZ_CP023616.1_840187-840205|NZ_CP023616.1_1090940-1090958|NZ_CP023616.1_1091588-1091606|NZ_CP023616.1_1095646-1095628|NZ_CP023616.1_1212966-1212984|NZ_CP023616.1_1213356-1213374|NZ_CP023616.1_1217998-1218016|NZ_CP023616.1_1489172-1489154|NZ_CP023616.1_1618624-1618606|NZ_CP023616.1_1619077-1619059|NZ_CP023616.1_1635999-1635981|NZ_CP023616.1_1636008-1635990|NZ_CP023616.1_1864288-1864270|NZ_CP023616.1_1864816-1864798|NZ_CP023616.1_1990071-1990053|NZ_CP023616.1_2001433-2001451|NZ_CP023616.1_2088793-2088775|NZ_CP023616.1_2303489-2303471|NZ_CP023616.1_2356941-2356923|NZ_CP023616.1_2419597-2419615|NZ_CP023616.1_2423684-2423666|NZ_CP023616.1_2569178-2569160|NZ_CP023616.1_2693476-2693494|NZ_CP023616.1_2795400-2795382|NZ_CP023616.1_2795982-2795964|NZ_CP023616.1_3054572-3054590|NZ_CP023616.1_3054671-3054689|NZ_CP023616.1_3705482-3705500|NZ_CP023616.1_3737459-3737441|NZ_CP023616.1_3738083-3738065|NZ_CP023616.1_3738326-3738308|NZ_CP023616.1_3738459-3738441|NZ_CP023616.1_3802322-3802340|NZ_CP023616.1_3802505-3802523|NZ_CP023616.1_3802673-3802691|NZ_CP023616.1_3930486-3930504|NZ_CP023616.1_3932216-3932234|NZ_CP023616.1_3940723-3940741|NZ_CP023616.1_4031702-4031684|NZ_CP023616.1_4094228-4094246	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP023616.1_1207343_1207610_+,NA|61aa|down_3|NZ_CP023616.1_1215185_1215368_+,NA|35aa|down_4|NZ_CP023616.1_1215477_1215582_+	NA|465aa|up_9|NZ_CP023616.1_1201677_1203072_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP023616.1_1203273_1203996_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP023616.1_1204027_1205194_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP023616.1_1205264_1205759_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP023616.1_1205944_1206379_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP023616.1_1206480_1207347_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP023616.1_1207343_1207610_+	NA	NA|674aa|up_2|NZ_CP023616.1_1207596_1209618_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP023616.1_1209716_1210445_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP023616.1_1210555_1211344_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP023616.1_1214000_1214321_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP023616.1_1214473_1214908_+	pfam00934, PE, PE family	NA|55aa|down_2|NZ_CP023616.1_1215009_1215174_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP023616.1_1215185_1215368_+	NA	NA|35aa|down_4|NZ_CP023616.1_1215477_1215582_+	NA	NA|152aa|down_5|NZ_CP023616.1_1215559_1216015_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP023616.1_1216429_1218991_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP023616.1_1219208_1220147_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP023616.1_1220534_1221815_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP023616.1_1221919_1222747_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	9	1636577-1636803	3	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CGGCGGCGCCGTTGGCGCCGTTGCCGCCGGCGCCGCCGTTGCCGCCG	47	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|38aa|up_8|NZ_CP023616.1_1623085_1623199_-,NA|137aa|up_7|NZ_CP023616.1_1623248_1623659_-,NA|288aa|down_2|NZ_CP023616.1_1640641_1641505_+	NA|162aa|up_9|NZ_CP023616.1_1622168_1622654_-	cd07820, SRPBCC_3, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|38aa|up_8|NZ_CP023616.1_1623085_1623199_-	NA	NA|137aa|up_7|NZ_CP023616.1_1623248_1623659_-	NA	NA|248aa|up_6|NZ_CP023616.1_1623675_1624419_-	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	NA|304aa|up_5|NZ_CP023616.1_1624415_1625327_-	TIGR00534, Putative_OxPP_cycle_protein_OpcA, glucose-6-phosphate dehydrogenase assembly protein OpcA	NA|515aa|up_4|NZ_CP023616.1_1625379_1626924_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|374aa|up_3|NZ_CP023616.1_1626920_1628042_-	PRK03343, PRK03343, transaldolase; Validated	NA|701aa|up_2|NZ_CP023616.1_1628058_1630161_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|1330aa|up_1|NZ_CP023616.1_1630599_1634589_-	pfam00934, PE, PE family	NA|309aa|up_0|NZ_CP023616.1_1634990_1635917_+	PRK04375, PRK04375, protoheme IX farnesyltransferase; Provisional	NA|422aa|down_0|NZ_CP023616.1_1638342_1639608_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|329aa|down_1|NZ_CP023616.1_1639635_1640622_-	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP023616.1_1640641_1641505_+	NA	NA|311aa|down_3|NZ_CP023616.1_1641454_1642387_-	COG1612, CtaA, Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones]	NA|262aa|down_4|NZ_CP023616.1_1642498_1643284_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|314aa|down_5|NZ_CP023616.1_1643280_1644222_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|592aa|down_6|NZ_CP023616.1_1644324_1646100_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|269aa|down_7|NZ_CP023616.1_1646147_1646954_+	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|847aa|down_8|NZ_CP023616.1_1646950_1649491_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|398aa|down_9|NZ_CP023616.1_1649487_1650681_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	10	2088265-2088519	3	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2088346-2088363|2088346-2088363|2088436-2088453	NZ_CP023616.1_401082-401065|NZ_CP023616.1_607419-607402|NZ_CP023616.1_3450183-3450166	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP023616.1_2087624_2087888_-,NA	NA|165aa|up_9|NZ_CP023616.1_2073918_2074413_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP023616.1_2074816_2075494_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP023616.1_2075852_2078678_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP023616.1_2078904_2079765_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP023616.1_2079805_2080672_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP023616.1_2080676_2082563_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP023616.1_2082578_2084612_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP023616.1_2084731_2086957_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP023616.1_2087232_2087628_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP023616.1_2087624_2087888_-	NA	NA|346aa|down_0|NZ_CP023616.1_2089656_2090694_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP023616.1_2090693_2092061_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP023616.1_2092234_2093671_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|486aa|down_3|NZ_CP023616.1_2093706_2095164_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP023616.1_2095193_2096144_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP023616.1_2096158_2096575_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP023616.1_2096852_2097275_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP023616.1_2097323_2097626_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP023616.1_2097622_2097937_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP023616.1_2097936_2099670_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	11	2163354-2163458	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CAACCCAAACGGATTAATCGCGAAACCAGGGATCGT	36	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023616.1_2159898_2160306_-,NA|127aa|down_6|NZ_CP023616.1_2176527_2176908_-	NA|216aa|up_9|NZ_CP023616.1_2153212_2153860_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023616.1_2153866_2156089_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023616.1_2156126_2156570_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023616.1_2156683_2157277_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023616.1_2157359_2157965_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023616.1_2158064_2159069_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023616.1_2159168_2159921_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023616.1_2159898_2160306_-	NA	NA|368aa|up_1|NZ_CP023616.1_2160440_2161544_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_0|NZ_CP023616.1_2161543_2162740_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|988aa|down_0|NZ_CP023616.1_2167626_2170590_-	pfam00823, PPE, PPE family	NA|155aa|down_1|NZ_CP023616.1_2171038_2171503_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_2|NZ_CP023616.1_2171600_2172464_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_3|NZ_CP023616.1_2172501_2173773_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_4|NZ_CP023616.1_2174044_2175160_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_5|NZ_CP023616.1_2175150_2176491_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_6|NZ_CP023616.1_2176527_2176908_-	NA	NA|621aa|down_7|NZ_CP023616.1_2177064_2178927_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_8|NZ_CP023616.1_2178934_2179414_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_9|NZ_CP023616.1_2179650_2180424_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	12	2168792-2169011	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_3|NZ_CP023616.1_2159898_2160306_-,NA|127aa|down_5|NZ_CP023616.1_2176527_2176908_-	NA|741aa|up_9|NZ_CP023616.1_2153866_2156089_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_8|NZ_CP023616.1_2156126_2156570_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_7|NZ_CP023616.1_2156683_2157277_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_6|NZ_CP023616.1_2157359_2157965_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_5|NZ_CP023616.1_2158064_2159069_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_4|NZ_CP023616.1_2159168_2159921_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_3|NZ_CP023616.1_2159898_2160306_-	NA	NA|368aa|up_2|NZ_CP023616.1_2160440_2161544_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_1|NZ_CP023616.1_2161543_2162740_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|1460aa|up_0|NZ_CP023616.1_2162909_2167289_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP023616.1_2171038_2171503_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP023616.1_2171600_2172464_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP023616.1_2172501_2173773_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP023616.1_2174044_2175160_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP023616.1_2175150_2176491_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP023616.1_2176527_2176908_-	NA	NA|621aa|down_6|NZ_CP023616.1_2177064_2178927_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP023616.1_2178934_2179414_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP023616.1_2179650_2180424_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP023616.1_2180427_2181195_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	13	3119165-3120519	4,7,4	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-D,Type III-B,Type III-C,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	15,17,18	18	TypeIII-D,TypeIII-B,TypeIII-C,TypeIII-A	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP023616.1_3112444_3112699_-,NA|135aa|up_7|NZ_CP023616.1_3112846_3113251_+,NA|64aa|up_6|NZ_CP023616.1_3113247_3113439_+,NA|86aa|up_4|NZ_CP023616.1_3115025_3115283_+,NA|104aa|up_3|NZ_CP023616.1_3115387_3115699_+,NA|203aa|up_2|NZ_CP023616.1_3116118_3116727_+,NA	NA|92aa|up_9|NZ_CP023616.1_3111993_3112269_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP023616.1_3112444_3112699_-	NA	NA|135aa|up_7|NZ_CP023616.1_3112846_3113251_+	NA	NA|64aa|up_6|NZ_CP023616.1_3113247_3113439_+	NA	NA|385aa|up_5|NZ_CP023616.1_3113637_3114792_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP023616.1_3115025_3115283_+	NA	NA|104aa|up_3|NZ_CP023616.1_3115387_3115699_+	NA	NA|203aa|up_2|NZ_CP023616.1_3116118_3116727_+	NA	NA|470aa|up_1|NZ_CP023616.1_3116797_3118207_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP023616.1_3118203_3119016_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP023616.1_3120545_3121807_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP023616.1_3123604_3123946_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP023616.1_3123946_3124963_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP023616.1_3124975_3126124_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP023616.1_3126219_3127347_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP023616.1_3127343_3128252_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP023616.1_3128232_3128943_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP023616.1_3128952_3129327_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_8|NZ_CP023616.1_3129323_3131753_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP023616.1_3131749_3132472_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	14	3121842-3123556	8,5,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-D,Type III-B,Type III-C,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-D,TypeIII-B,TypeIII-C,TypeIII-A	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP023616.1_3112444_3112699_-,NA|135aa|up_8|NZ_CP023616.1_3112846_3113251_+,NA|64aa|up_7|NZ_CP023616.1_3113247_3113439_+,NA|86aa|up_5|NZ_CP023616.1_3115025_3115283_+,NA|104aa|up_4|NZ_CP023616.1_3115387_3115699_+,NA|203aa|up_3|NZ_CP023616.1_3116118_3116727_+,NA	NA|85aa|up_9|NZ_CP023616.1_3112444_3112699_-	NA	NA|135aa|up_8|NZ_CP023616.1_3112846_3113251_+	NA	NA|64aa|up_7|NZ_CP023616.1_3113247_3113439_+	NA	NA|385aa|up_6|NZ_CP023616.1_3113637_3114792_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP023616.1_3115025_3115283_+	NA	NA|104aa|up_4|NZ_CP023616.1_3115387_3115699_+	NA	NA|203aa|up_3|NZ_CP023616.1_3116118_3116727_+	NA	NA|470aa|up_2|NZ_CP023616.1_3116797_3118207_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP023616.1_3118203_3119016_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP023616.1_3120545_3121807_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP023616.1_3123604_3123946_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP023616.1_3123946_3124963_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP023616.1_3124975_3126124_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP023616.1_3126219_3127347_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP023616.1_3127343_3128252_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP023616.1_3128232_3128943_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP023616.1_3128952_3129327_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_7|NZ_CP023616.1_3129323_3131753_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP023616.1_3131749_3132472_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP023616.1_3132871_3133417_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	15	3740653-3741194	6	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP023616.1_3755295_3755583_-,NA|87aa|down_9|NZ_CP023616.1_3768703_3768964_-	NA|282aa|up_9|NZ_CP023616.1_3719904_3720750_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP023616.1_3721224_3721665_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP023616.1_3721698_3722568_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP023616.1_3722588_3723599_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP023616.1_3723883_3724516_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP023616.1_3724582_3725812_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP023616.1_3726094_3727444_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP023616.1_3727455_3728595_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP023616.1_3728591_3729323_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_0|NZ_CP023616.1_3729331_3736903_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP023616.1_3743165_3743423_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP023616.1_3743678_3753152_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP023616.1_3753777_3754224_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP023616.1_3754260_3755001_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP023616.1_3755295_3755583_-	NA	NA|3717aa|down_5|NZ_CP023616.1_3755919_3767070_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP023616.1_3767313_3768108_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP023616.1_3768189_3768561_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_8|NZ_CP023616.1_3768458_3768677_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP023616.1_3768703_3768964_-	NA
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	16	3948331-3950082	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCACCGGCGGCNNCGGCGGNNNCGGCGG	36	2	9	3948922-3948957|3948922-3948957|3948922-3948957|3948922-3948957|3948922-3948957|3949813-3949839|3949813-3949839|3949813-3949839|3949813-3949839	NZ_CP023616.1_3947038-3947073|NZ_CP023616.1_3947380-3947415|NZ_CP023616.1_3947971-3948006|NZ_CP023616.1_3948322-3948357|NZ_CP023616.1_3932771-3932806|NZ_CP023616.1_361997-362023|NZ_CP023616.1_3941224-3941250|NZ_CP023616.1_3941560-3941586|NZ_CP023616.1_3941906-3941932	NA	21	21	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP023616.1_3953397_3954237_+	NA|318aa|up_9|NZ_CP023616.1_3921053_3922007_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP023616.1_3922031_3922223_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP023616.1_3922437_3923640_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP023616.1_3923664_3924786_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP023616.1_3924856_3926365_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1382aa|up_4|NZ_CP023616.1_3926535_3930681_+	pfam00934, PE, PE family	NA|1902aa|up_3|NZ_CP023616.1_3930971_3936677_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP023616.1_3936843_3938391_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP023616.1_3938387_3939224_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP023616.1_3945058_3945715_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP023616.1_3950790_3952437_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP023616.1_3952510_3953302_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP023616.1_3953397_3954237_+	NA	NA|399aa|down_3|NZ_CP023616.1_3954291_3955488_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP023616.1_3955516_3956227_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP023616.1_3956291_3957335_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP023616.1_3957487_3958399_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP023616.1_3958414_3959479_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP023616.1_3959495_3960680_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP023616.1_3960721_3961753_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_002447735.1_ASM244773v1	NZ_CP023616	Mycobacterium tuberculosis strain LN3668 chromosome, complete genome	17	4110645-4110733	9	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP023616.1_4101231_4102002_-,NA|119aa|up_3|NZ_CP023616.1_4107136_4107493_+,NA|52aa|up_2|NZ_CP023616.1_4107592_4107748_+,NA|233aa|up_0|NZ_CP023616.1_4109749_4110448_-,NA|126aa|down_6|NZ_CP023616.1_4115968_4116346_+	NA|288aa|up_9|NZ_CP023616.1_4099613_4100477_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP023616.1_4101231_4102002_-	NA	NA|549aa|up_7|NZ_CP023616.1_4101998_4103645_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP023616.1_4103641_4104505_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP023616.1_4104497_4105424_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP023616.1_4105425_4107051_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP023616.1_4107136_4107493_+	NA	NA|52aa|up_2|NZ_CP023616.1_4107592_4107748_+	NA	NA|652aa|up_1|NZ_CP023616.1_4107758_4109714_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP023616.1_4109749_4110448_-	NA	NA|173aa|down_0|NZ_CP023616.1_4110793_4111312_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP023616.1_4111312_4112296_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP023616.1_4112288_4113482_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP023616.1_4113487_4114309_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP023616.1_4114440_4115124_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP023616.1_4115123_4115861_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP023616.1_4115968_4116346_+	NA	NA|225aa|down_7|NZ_CP023616.1_4116444_4117119_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP023616.1_4117224_4118019_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP023616.1_4118025_4118481_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
