The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023611	Mycobacterium tuberculosis strain LN763 chromosome, complete genome	4411321	2940988	2976354	4411321	terminase,transposase,tRNA,integrase,capsid,protease,head	Tupanvirus(11.11%)	41	2969789:2969816	2980771:2980798
WP_003413486.1|2940988_2943067_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943175_2943403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943399_2944785_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945129_2945630_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945646_2946087_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946233_2946911_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946895_2947249_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947261_2947687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947683_2948358_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948435_2949257_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949392_2950286_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950288_2951107_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951121_2952303_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952361_2952793_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953306_2954548_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954857_2955220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955566_2956691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956692_2957232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957371_2958670_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958708_2958990_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959134_2959620_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959646_2959904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959904_2962241_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962269_2962512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962512_2963190_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963385_2964042_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964204_2964651_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964825_2965158_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965277_2965637_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965738_2966197_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966332_2966713_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966709_2968206_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968395_2968632_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968704_2968878_+	hypothetical protein	NA	NA	NA	NA	NA
2969789:2969816	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969922_2970354_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970350_2971349_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971362_2971827_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971959_2973220_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973594_2975034_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975041_2975575_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975727_2976354_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980771:2980798	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023611	Mycobacterium tuberculosis strain LN763 chromosome, complete genome	4411321	3710221	3796132	4411321	transposase,tRNA	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710221_3711482_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711537_3711699_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711720_3713250_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713182_3714121_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714129_3715497_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715565_3716783_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716878_3718387_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718383_3719535_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719725_3720571_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721045_3721486_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721519_3722389_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722409_3723420_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723704_3724337_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724403_3725633_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725915_3727265_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727276_3728416_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728412_3729144_+	methyltransferase	NA	NA	NA	NA	NA
WP_096865691.1|3729152_3736724_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3742968_3743226_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743481_3752955_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753580_3754027_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754063_3754804_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755098_3755386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755722_3766873_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767116_3767911_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767992_3768364_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768261_3768480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768506_3768767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768881_3769271_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769284_3769578_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769574_3770420_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770543_3770819_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770815_3771073_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771114_3772305_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772421_3772790_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772786_3773338_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773344_3773926_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773906_3774275_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774252_3774645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774641_3777272_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777507_3777972_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778338_3780105_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780105_3780750_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780748_3781183_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781271_3784511_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784702_3786043_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786084_3787260_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787313_3787418_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787496_3788138_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788138_3788387_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788391_3789819_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789926_3790580_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790618_3792124_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792128_3793019_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793027_3794638_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794582_3794828_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794870_3796132_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
