assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	1	334328-334664	1	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCCGCCGGCCCCGCCG	16	0	0	NA	NA	NA	4	4	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP023604.1_333147_333330_-,NA	NA|398aa|up_9|NZ_CP023604.1_323325_324519_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP023604.1_324554_326237_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP023604.1_326253_328449_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP023604.1_328562_329696_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP023604.1_329692_330313_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP023604.1_330409_330991_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP023604.1_330920_331646_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP023604.1_331735_332656_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP023604.1_332695_333124_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP023604.1_333147_333330_-	NA	NA|838aa|down_0|NZ_CP023604.1_336529_339043_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP023604.1_339333_340944_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP023604.1_340967_341876_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP023604.1_342099_343995_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP023604.1_343991_345608_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP023604.1_345604_349597_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP023604.1_349593_349902_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP023604.1_349904_351446_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP023604.1_351494_351788_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP023604.1_351817_352108_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	2	338074-338296	2	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	ATCCGCCGCTACCGCCGGTGCCGCCGGCGCCGAACAGCCCGCC	43	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_1|NZ_CP023604.1_333147_333330_-,NA	NA|561aa|up_9|NZ_CP023604.1_324554_326237_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_8|NZ_CP023604.1_326253_328449_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_7|NZ_CP023604.1_328562_329696_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_6|NZ_CP023604.1_329692_330313_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_5|NZ_CP023604.1_330409_330991_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_4|NZ_CP023604.1_330920_331646_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_3|NZ_CP023604.1_331735_332656_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_2|NZ_CP023604.1_332695_333124_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_1|NZ_CP023604.1_333147_333330_-	NA	NA|949aa|up_0|NZ_CP023604.1_333424_336271_-	pfam00934, PE, PE family	NA|537aa|down_0|NZ_CP023604.1_339333_340944_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP023604.1_340967_341876_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP023604.1_342099_343995_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP023604.1_343991_345608_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP023604.1_345604_349597_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP023604.1_349593_349902_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP023604.1_349904_351446_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP023604.1_351494_351788_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP023604.1_351817_352108_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP023604.1_352118_353006_+	pfam14011, ESX-1_EspG, EspG family
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	3	366433-367131	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	366721-366762|366796-366828	NZ_CP023604.1_374752-374793|NZ_CP023604.1_373567-373599	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP023604.1_363445_363748_+,NA|161aa|down_1|NZ_CP023604.1_376541_377024_-,NA|410aa|down_5|NZ_CP023604.1_379140_380370_+	NA|262aa|up_9|NZ_CP023604.1_358140_358926_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP023604.1_358914_359718_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP023604.1_359727_361125_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP023604.1_361303_363079_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP023604.1_363221_363449_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP023604.1_363445_363748_+	NA	NA|74aa|up_3|NZ_CP023604.1_363795_364017_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP023604.1_364013_364439_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP023604.1_364574_365207_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP023604.1_365203_366112_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP023604.1_375882_376554_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP023604.1_376541_377024_-	NA	NA|239aa|down_2|NZ_CP023604.1_377081_377798_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP023604.1_377899_378556_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP023604.1_378625_379117_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP023604.1_379140_380370_+	NA	NA|621aa|down_6|NZ_CP023604.1_380524_382387_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP023604.1_382458_382845_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP023604.1_382847_383510_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP023604.1_383570_384455_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	4	691903-691979	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP023604.1_677587_677803_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP023604.1_677799_678207_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP023604.1_678266_678953_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP023604.1_679106_681740_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP023604.1_681762_684150_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP023604.1_684287_685010_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP023604.1_685006_685804_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP023604.1_685805_686693_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP023604.1_686698_687913_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP023604.1_688936_690382_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP023604.1_693114_694665_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP023604.1_694716_695109_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP023604.1_695105_695363_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP023604.1_695545_696781_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP023604.1_697031_697445_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP023604.1_697441_697678_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP023604.1_697781_698288_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP023604.1_698401_698872_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP023604.1_698915_699677_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP023604.1_699733_700045_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	5	926470-927417	1	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	2	927253-927288|927253-927288	NZ_CP023604.1_675007-674972|NZ_CP023604.1_2423562-2423527	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP023604.1_931427_931979_-,NA|81aa|down_8|NZ_CP023604.1_937442_937685_+	NA|685aa|up_9|NZ_CP023604.1_914135_916190_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP023604.1_916355_917525_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP023604.1_917584_918601_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP023604.1_918762_919404_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP023604.1_919484_920540_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP023604.1_920591_920984_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP023604.1_921041_921464_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP023604.1_921425_921716_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP023604.1_921820_922726_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP023604.1_922744_923560_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|883aa|down_0|NZ_CP023604.1_927686_930335_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP023604.1_930802_931447_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP023604.1_931427_931979_-	NA	NA|218aa|down_3|NZ_CP023604.1_932128_932782_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP023604.1_932852_933881_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP023604.1_934569_935340_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP023604.1_935426_936239_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP023604.1_936306_937167_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP023604.1_937442_937685_+	NA	NA|431aa|down_9|NZ_CP023604.1_937961_939254_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	6	1191176-1191284	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP023604.1_1180543_1182175_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP023604.1_1182250_1183315_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP023604.1_1183367_1183841_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP023604.1_1183874_1184738_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP023604.1_1184742_1185600_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP023604.1_1185600_1186683_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP023604.1_1186763_1187183_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP023604.1_1187294_1187861_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP023604.1_1187857_1188253_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP023604.1_1188280_1190284_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP023604.1_1192369_1194133_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP023604.1_1194129_1194903_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP023604.1_1194914_1195952_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP023604.1_1196138_1196975_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP023604.1_1197090_1197942_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP023604.1_1198015_1199233_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP023604.1_1199285_1200230_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP023604.1_1200452_1201520_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP023604.1_1201576_1202971_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP023604.1_1203172_1203895_+	pfam06271, RDD, RDD family
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	7	1211810-1212665	4,3	CRISPRCasFinder,PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG,CCCGCCGGCACCGCCGGCACCGCCGACACCACCG	23,34	4	77	1212193-1212213|1212193-1212213|1212193-1212213|1212193-1212213|1212193-1212213|1212237-1212252|1212375-1212396|1212375-1212396|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510|1212492-1212510	NZ_CP023604.1_1212667-1212687|NZ_CP023604.1_2922052-2922072|NZ_CP023604.1_2961556-2961536|NZ_CP023604.1_3931265-3931285|NZ_CP023604.1_3946036-3946056|NZ_CP023604.1_2088460-2088445|NZ_CP023604.1_837311-837332|NZ_CP023604.1_1217503-1217524|NZ_CP023604.1_674671-674653|NZ_CP023604.1_1213335-1213353|NZ_CP023604.1_1217476-1217494|NZ_CP023604.1_1217548-1217566|NZ_CP023604.1_1630560-1630542|NZ_CP023604.1_1633386-1633368|NZ_CP023604.1_1990664-1990646|NZ_CP023604.1_2061388-2061370|NZ_CP023604.1_2061835-2061817|NZ_CP023604.1_2061934-2061916|NZ_CP023604.1_2801849-2801831|NZ_CP023604.1_2805377-2805359|NZ_CP023604.1_150187-150205|NZ_CP023604.1_333770-333752|NZ_CP023604.1_335189-335171|NZ_CP023604.1_335642-335624|NZ_CP023604.1_335693-335675|NZ_CP023604.1_335702-335684|NZ_CP023604.1_337973-337955|NZ_CP023604.1_338369-338351|NZ_CP023604.1_338398-338416|NZ_CP023604.1_338492-338474|NZ_CP023604.1_363023-363005|NZ_CP023604.1_443337-443319|NZ_CP023604.1_546681-546663|NZ_CP023604.1_623871-623889|NZ_CP023604.1_624093-624111|NZ_CP023604.1_673837-673819|NZ_CP023604.1_840094-840112|NZ_CP023604.1_1090839-1090857|NZ_CP023604.1_1091487-1091505|NZ_CP023604.1_1095545-1095527|NZ_CP023604.1_1212864-1212882|NZ_CP023604.1_1213254-1213272|NZ_CP023604.1_1217896-1217914|NZ_CP023604.1_1489072-1489054|NZ_CP023604.1_1618524-1618506|NZ_CP023604.1_1618977-1618959|NZ_CP023604.1_1635899-1635881|NZ_CP023604.1_1635908-1635890|NZ_CP023604.1_1636898-1636880|NZ_CP023604.1_1864178-1864160|NZ_CP023604.1_1864706-1864688|NZ_CP023604.1_1989938-1989920|NZ_CP023604.1_2001300-2001318|NZ_CP023604.1_2088658-2088640|NZ_CP023604.1_2303348-2303330|NZ_CP023604.1_2356800-2356782|NZ_CP023604.1_2419388-2419406|NZ_CP023604.1_2423475-2423457|NZ_CP023604.1_2568968-2568950|NZ_CP023604.1_2693266-2693284|NZ_CP023604.1_2795164-2795146|NZ_CP023604.1_2795746-2795728|NZ_CP023604.1_3054336-3054354|NZ_CP023604.1_3054435-3054453|NZ_CP023604.1_3705232-3705250|NZ_CP023604.1_3737209-3737191|NZ_CP023604.1_3737833-3737815|NZ_CP023604.1_3738076-3738058|NZ_CP023604.1_3738209-3738191|NZ_CP023604.1_3802063-3802081|NZ_CP023604.1_3802246-3802264|NZ_CP023604.1_3802414-3802432|NZ_CP023604.1_3930218-3930236|NZ_CP023604.1_3931948-3931966|NZ_CP023604.1_3940437-3940455|NZ_CP023604.1_4031410-4031392|NZ_CP023604.1_4093936-4093954	NA:NA	16,2	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP023604.1_1207242_1207509_+,NA|61aa|down_3|NZ_CP023604.1_1215083_1215266_+,NA|35aa|down_4|NZ_CP023604.1_1215375_1215480_+	NA|465aa|up_9|NZ_CP023604.1_1201576_1202971_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP023604.1_1203172_1203895_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP023604.1_1203926_1205093_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP023604.1_1205163_1205658_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP023604.1_1205843_1206278_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP023604.1_1206379_1207246_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP023604.1_1207242_1207509_+	NA	NA|674aa|up_2|NZ_CP023604.1_1207495_1209517_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP023604.1_1209615_1210344_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP023604.1_1210454_1211243_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP023604.1_1213898_1214219_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP023604.1_1214371_1214806_+	pfam00934, PE, PE family	NA|56aa|down_2|NZ_CP023604.1_1214904_1215072_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP023604.1_1215083_1215266_+	NA	NA|35aa|down_4|NZ_CP023604.1_1215375_1215480_+	NA	NA|152aa|down_5|NZ_CP023604.1_1215457_1215913_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP023604.1_1216327_1218889_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP023604.1_1219106_1220045_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP023604.1_1220432_1221713_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP023604.1_1221817_1222645_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	8	1572048-1573119	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP023604.1_1563811_1564129_+,NA	NA|103aa|up_9|NZ_CP023604.1_1561326_1561635_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP023604.1_1561631_1563251_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP023604.1_1563811_1564129_+	NA	NA|209aa|up_6|NZ_CP023604.1_1564263_1564890_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP023604.1_1564955_1565288_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP023604.1_1565303_1566560_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP023604.1_1566687_1567899_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP023604.1_1567971_1569450_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP023604.1_1569446_1570832_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP023604.1_1570909_1571944_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP023604.1_1573973_1574375_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP023604.1_1574371_1574629_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP023604.1_1574711_1575671_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP023604.1_1575695_1576658_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP023604.1_1576791_1577394_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP023604.1_1577474_1579442_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP023604.1_1579459_1580284_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP023604.1_1580452_1580935_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP023604.1_1581006_1581831_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP023604.1_1582027_1582966_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	9	2088130-2088384	2	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2088211-2088228|2088211-2088228|2088301-2088318	NZ_CP023604.1_401048-401031|NZ_CP023604.1_607326-607309|NZ_CP023604.1_3449934-3449917	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP023604.1_2087489_2087753_-,NA	NA|165aa|up_9|NZ_CP023604.1_2073783_2074278_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP023604.1_2074681_2075359_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP023604.1_2075717_2078543_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP023604.1_2078769_2079630_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP023604.1_2079670_2080537_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP023604.1_2080541_2082428_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP023604.1_2082443_2084477_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP023604.1_2084596_2086822_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP023604.1_2087097_2087493_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP023604.1_2087489_2087753_-	NA	NA|346aa|down_0|NZ_CP023604.1_2089521_2090559_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP023604.1_2090558_2091926_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP023604.1_2092099_2093536_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP023604.1_2093571_2095023_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP023604.1_2095052_2096003_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP023604.1_2096017_2096434_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP023604.1_2096711_2097134_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP023604.1_2097182_2097485_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP023604.1_2097481_2097796_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP023604.1_2097795_2099529_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	10	2163222-2163326	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CAACCCAAACGGATTAATCGCGAAACCAGGGATCGT	36	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023604.1_2159766_2160174_-,NA|127aa|down_6|NZ_CP023604.1_2176385_2176766_-	NA|216aa|up_9|NZ_CP023604.1_2153080_2153728_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023604.1_2153734_2155957_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023604.1_2155994_2156438_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023604.1_2156551_2157145_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023604.1_2157227_2157833_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023604.1_2157932_2158937_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023604.1_2159036_2159789_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023604.1_2159766_2160174_-	NA	NA|368aa|up_1|NZ_CP023604.1_2160308_2161412_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_0|NZ_CP023604.1_2161411_2162608_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|988aa|down_0|NZ_CP023604.1_2167484_2170448_-	pfam00823, PPE, PPE family	NA|155aa|down_1|NZ_CP023604.1_2170896_2171361_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_2|NZ_CP023604.1_2171458_2172322_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_3|NZ_CP023604.1_2172359_2173631_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_4|NZ_CP023604.1_2173902_2175018_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_5|NZ_CP023604.1_2175008_2176349_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_6|NZ_CP023604.1_2176385_2176766_-	NA	NA|621aa|down_7|NZ_CP023604.1_2176922_2178785_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_8|NZ_CP023604.1_2178792_2179272_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_9|NZ_CP023604.1_2179508_2180282_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	11	2168650-2168869	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023604.1_2159766_2160174_-,NA|127aa|down_5|NZ_CP023604.1_2176385_2176766_-	NA|216aa|up_9|NZ_CP023604.1_2153080_2153728_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023604.1_2153734_2155957_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023604.1_2155994_2156438_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023604.1_2156551_2157145_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023604.1_2157227_2157833_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023604.1_2157932_2158937_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023604.1_2159036_2159789_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023604.1_2159766_2160174_-	NA	NA|368aa|up_1|NZ_CP023604.1_2160308_2161412_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_0|NZ_CP023604.1_2161411_2162608_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|155aa|down_0|NZ_CP023604.1_2170896_2171361_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP023604.1_2171458_2172322_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP023604.1_2172359_2173631_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP023604.1_2173902_2175018_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP023604.1_2175008_2176349_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP023604.1_2176385_2176766_-	NA	NA|621aa|down_6|NZ_CP023604.1_2176922_2178785_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP023604.1_2178792_2179272_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP023604.1_2179508_2180282_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP023604.1_2180285_2181053_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	12	3118927-3120281	4,8,3	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-D,Type III-C,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	16,17,18	18	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP023604.1_3112206_3112461_-,NA|135aa|up_7|NZ_CP023604.1_3112608_3113013_+,NA|64aa|up_6|NZ_CP023604.1_3113009_3113201_+,NA|86aa|up_4|NZ_CP023604.1_3114787_3115045_+,NA|104aa|up_3|NZ_CP023604.1_3115149_3115461_+,NA|203aa|up_2|NZ_CP023604.1_3115880_3116489_+,NA	NA|92aa|up_9|NZ_CP023604.1_3111755_3112031_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP023604.1_3112206_3112461_-	NA	NA|135aa|up_7|NZ_CP023604.1_3112608_3113013_+	NA	NA|64aa|up_6|NZ_CP023604.1_3113009_3113201_+	NA	NA|385aa|up_5|NZ_CP023604.1_3113399_3114554_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP023604.1_3114787_3115045_+	NA	NA|104aa|up_3|NZ_CP023604.1_3115149_3115461_+	NA	NA|203aa|up_2|NZ_CP023604.1_3115880_3116489_+	NA	NA|470aa|up_1|NZ_CP023604.1_3116559_3117969_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP023604.1_3117965_3118778_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP023604.1_3120307_3121569_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP023604.1_3123366_3123708_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP023604.1_3123708_3124725_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP023604.1_3124737_3125886_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP023604.1_3125981_3127109_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP023604.1_3127105_3128014_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP023604.1_3127994_3128705_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP023604.1_3128714_3129089_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_8|NZ_CP023604.1_3129085_3131515_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP023604.1_3131511_3132234_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	13	3121604-3123318	9,4,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-B,Type III-D,Type III-C,Type III-A	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGA	36,36,35	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP023604.1_3112206_3112461_-,NA|135aa|up_8|NZ_CP023604.1_3112608_3113013_+,NA|64aa|up_7|NZ_CP023604.1_3113009_3113201_+,NA|86aa|up_5|NZ_CP023604.1_3114787_3115045_+,NA|104aa|up_4|NZ_CP023604.1_3115149_3115461_+,NA|203aa|up_3|NZ_CP023604.1_3115880_3116489_+,NA	NA|85aa|up_9|NZ_CP023604.1_3112206_3112461_-	NA	NA|135aa|up_8|NZ_CP023604.1_3112608_3113013_+	NA	NA|64aa|up_7|NZ_CP023604.1_3113009_3113201_+	NA	NA|385aa|up_6|NZ_CP023604.1_3113399_3114554_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP023604.1_3114787_3115045_+	NA	NA|104aa|up_4|NZ_CP023604.1_3115149_3115461_+	NA	NA|203aa|up_3|NZ_CP023604.1_3115880_3116489_+	NA	NA|470aa|up_2|NZ_CP023604.1_3116559_3117969_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP023604.1_3117965_3118778_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP023604.1_3120307_3121569_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP023604.1_3123366_3123708_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP023604.1_3123708_3124725_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP023604.1_3124737_3125886_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP023604.1_3125981_3127109_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP023604.1_3127105_3128014_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP023604.1_3127994_3128705_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP023604.1_3128714_3129089_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|810aa|down_7|NZ_CP023604.1_3129085_3131515_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP023604.1_3131511_3132234_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP023604.1_3132633_3133179_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	14	3740403-3740944	5	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP023604.1_3755045_3755333_-,NA|87aa|down_9|NZ_CP023604.1_3768453_3768714_-	NA|282aa|up_9|NZ_CP023604.1_3719654_3720500_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP023604.1_3720974_3721415_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP023604.1_3721448_3722318_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP023604.1_3722338_3723349_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP023604.1_3723633_3724266_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP023604.1_3724332_3725562_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP023604.1_3725844_3727194_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP023604.1_3727205_3728345_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP023604.1_3728341_3729073_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_0|NZ_CP023604.1_3729081_3736653_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP023604.1_3742915_3743173_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP023604.1_3743428_3752902_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP023604.1_3753527_3753974_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP023604.1_3754010_3754751_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP023604.1_3755045_3755333_-	NA	NA|3717aa|down_5|NZ_CP023604.1_3755669_3766820_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP023604.1_3767063_3767858_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP023604.1_3767939_3768311_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_8|NZ_CP023604.1_3768208_3768427_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP023604.1_3768453_3768714_-	NA
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	15	3762201-3762327	6	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTTGCCGATGCCGGTGTTGAAA	22	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|96aa|up_0|NZ_CP023604.1_3755045_3755333_-,NA|87aa|down_3|NZ_CP023604.1_3768453_3768714_-	NA|410aa|up_9|NZ_CP023604.1_3724332_3725562_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_8|NZ_CP023604.1_3725844_3727194_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_7|NZ_CP023604.1_3727205_3728345_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_6|NZ_CP023604.1_3728341_3729073_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_5|NZ_CP023604.1_3729081_3736653_-	pfam00823, PPE, PPE family	NA|86aa|up_4|NZ_CP023604.1_3742915_3743173_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|up_3|NZ_CP023604.1_3743428_3752902_-	pfam00823, PPE, PPE family	NA|149aa|up_2|NZ_CP023604.1_3753527_3753974_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|up_1|NZ_CP023604.1_3754010_3754751_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|up_0|NZ_CP023604.1_3755045_3755333_-	NA	NA|265aa|down_0|NZ_CP023604.1_3767063_3767858_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_1|NZ_CP023604.1_3767939_3768311_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_2|NZ_CP023604.1_3768208_3768427_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_3|NZ_CP023604.1_3768453_3768714_-	NA	NA|130aa|down_4|NZ_CP023604.1_3768828_3769218_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|98aa|down_5|NZ_CP023604.1_3769231_3769525_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|282aa|down_6|NZ_CP023604.1_3769521_3770367_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|92aa|down_7|NZ_CP023604.1_3770490_3770766_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|86aa|down_8|NZ_CP023604.1_3770762_3771020_+	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|397aa|down_9|NZ_CP023604.1_3771061_3772252_+	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	16	3948045-3949796	6	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCACCGGCGGCNNCGGCGGNNNCGGCGG	36	2	9	3948636-3948671|3948636-3948671|3948636-3948671|3948636-3948671|3948636-3948671|3949527-3949553|3949527-3949553|3949527-3949553|3949527-3949553	NZ_CP023604.1_3946752-3946787|NZ_CP023604.1_3947094-3947129|NZ_CP023604.1_3947685-3947720|NZ_CP023604.1_3948036-3948071|NZ_CP023604.1_3932503-3932538|NZ_CP023604.1_361963-361989|NZ_CP023604.1_3940938-3940964|NZ_CP023604.1_3941274-3941300|NZ_CP023604.1_3941620-3941646	NA	21	21	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP023604.1_3953111_3953951_+	NA|318aa|up_9|NZ_CP023604.1_3920794_3921748_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP023604.1_3921772_3921964_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP023604.1_3922178_3923381_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP023604.1_3923405_3924527_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP023604.1_3924597_3926106_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1379aa|up_4|NZ_CP023604.1_3926276_3930413_+	pfam00934, PE, PE family	NA|1896aa|up_3|NZ_CP023604.1_3930703_3936391_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP023604.1_3936557_3938105_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP023604.1_3938101_3938938_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP023604.1_3944772_3945429_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP023604.1_3950504_3952151_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP023604.1_3952224_3953016_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP023604.1_3953111_3953951_+	NA	NA|399aa|down_3|NZ_CP023604.1_3954005_3955202_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP023604.1_3955230_3955941_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP023604.1_3956005_3957049_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP023604.1_3957201_3958113_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP023604.1_3958128_3959193_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP023604.1_3959209_3960394_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP023604.1_3960435_3961467_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_002447495.1_ASM244749v1	NZ_CP023604	Mycobacterium tuberculosis strain LE76 chromosome, complete genome	17	4110353-4110441	10	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP023604.1_4100939_4101710_-,NA|119aa|up_3|NZ_CP023604.1_4106844_4107201_+,NA|52aa|up_2|NZ_CP023604.1_4107300_4107456_+,NA|233aa|up_0|NZ_CP023604.1_4109457_4110156_-,NA|126aa|down_6|NZ_CP023604.1_4115676_4116054_+	NA|288aa|up_9|NZ_CP023604.1_4099321_4100185_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP023604.1_4100939_4101710_-	NA	NA|549aa|up_7|NZ_CP023604.1_4101706_4103353_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP023604.1_4103349_4104213_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP023604.1_4104205_4105132_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP023604.1_4105133_4106759_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP023604.1_4106844_4107201_+	NA	NA|52aa|up_2|NZ_CP023604.1_4107300_4107456_+	NA	NA|652aa|up_1|NZ_CP023604.1_4107466_4109422_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP023604.1_4109457_4110156_-	NA	NA|173aa|down_0|NZ_CP023604.1_4110501_4111020_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP023604.1_4111020_4112004_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP023604.1_4111996_4113190_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP023604.1_4113195_4114017_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP023604.1_4114148_4114832_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP023604.1_4114831_4115569_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP023604.1_4115676_4116054_+	NA	NA|225aa|down_7|NZ_CP023604.1_4116152_4116827_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP023604.1_4116932_4117727_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP023604.1_4117733_4118189_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
