The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023599	Mycobacterium tuberculosis strain CSV383 chromosome, complete genome	4411115	2940879	2976245	4411115	terminase,capsid,protease,head,integrase,transposase,tRNA	Tupanvirus(11.11%)	41	2969680:2969707	2980662:2980689
WP_003413486.1|2940879_2942958_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943066_2943294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096865846.1|2943290_2944676_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945020_2945521_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945537_2945978_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946124_2946802_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946786_2947140_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947152_2947578_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003901438.1|2947574_2948249_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948326_2949148_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949283_2950177_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950179_2950998_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951012_2952194_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952252_2952684_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953197_2954439_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954748_2955111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003902322.1|2955457_2956582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956583_2957123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957262_2958561_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958599_2958881_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959025_2959511_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959537_2959795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959795_2962132_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962160_2962403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962403_2963081_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963276_2963933_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964095_2964542_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964716_2965049_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965168_2965528_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965629_2966088_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966223_2966604_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966600_2968097_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968286_2968523_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968595_2968769_+	hypothetical protein	NA	NA	NA	NA	NA
2969680:2969707	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969813_2970245_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970241_2971240_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971253_2971718_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971850_2973111_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003901443.1|2973485_2974925_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2974932_2975466_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975618_2976245_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980662:2980689	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023599	Mycobacterium tuberculosis strain CSV383 chromosome, complete genome	4411115	3710108	3796001	4411115	transposase,tRNA	Burkholderia_virus(28.57%)	56	NA	NA
WP_087902221.1|3710108_3711369_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711424_3711586_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711607_3713137_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713069_3714008_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714016_3715384_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715452_3716670_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716765_3718274_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718270_3719422_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719612_3720458_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3720932_3721373_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721406_3722276_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722296_3723307_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723591_3724224_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724290_3725520_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725802_3727152_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727163_3728303_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728299_3729031_+	methyltransferase	NA	NA	NA	NA	NA
WP_096865835.1|3729039_3736611_-	PPE family protein	NA	NA	NA	NA	NA
WP_157771837.1|3736659_3742407_-	PE domain-containing protein	NA	NA	NA	NA	NA
WP_003417619.1|3742836_3743094_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003901612.1|3743349_3752823_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753448_3753895_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003911006.1|3753931_3754672_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3754966_3755254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417738.1|3766983_3767778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767859_3768231_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768128_3768347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768373_3768634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768748_3769138_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769151_3769445_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769441_3770287_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770410_3770686_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770682_3770940_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3770981_3772172_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772288_3772657_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772653_3773205_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773211_3773793_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773773_3774142_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774119_3774512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003901616.1|3774508_3777139_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003901617.1|3777374_3777839_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778205_3779972_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3779972_3780617_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780615_3781050_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781138_3784378_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784569_3785910_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3785951_3787127_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787180_3787285_+	PE family protein	NA	NA	NA	NA	NA
WP_070893521.1|3787363_3788005_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788005_3788254_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788258_3789686_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789793_3790447_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790485_3791991_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3791995_3792886_-	diterpene synthase	NA	NA	NA	NA	NA
WP_078750126.1|3792894_3794688_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794739_3796001_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
