assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	1	334346-334682	1	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCCGCCGGCCCCGCCG	16	0	0	NA	NA	NA	4	4	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP023592.1_333165_333348_-,NA	NA|398aa|up_9|NZ_CP023592.1_323343_324537_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP023592.1_324572_326255_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP023592.1_326271_328467_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP023592.1_328580_329714_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP023592.1_329710_330331_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP023592.1_330427_331009_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP023592.1_330938_331664_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP023592.1_331753_332674_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP023592.1_332713_333142_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP023592.1_333165_333348_-	NA	NA|838aa|down_0|NZ_CP023592.1_336547_339061_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP023592.1_339351_340962_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP023592.1_340985_341894_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP023592.1_342117_344013_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP023592.1_344009_345626_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP023592.1_345622_349615_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP023592.1_349611_349920_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP023592.1_349922_351464_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP023592.1_351512_351806_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP023592.1_351835_352126_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	2	338092-338314	2	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	ATCCGCCGCTACCGCCGGTGCCGCCGGCGCCGAACAGCCCGCC	43	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_1|NZ_CP023592.1_333165_333348_-,NA	NA|561aa|up_9|NZ_CP023592.1_324572_326255_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_8|NZ_CP023592.1_326271_328467_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_7|NZ_CP023592.1_328580_329714_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_6|NZ_CP023592.1_329710_330331_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_5|NZ_CP023592.1_330427_331009_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_4|NZ_CP023592.1_330938_331664_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_3|NZ_CP023592.1_331753_332674_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_2|NZ_CP023592.1_332713_333142_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_1|NZ_CP023592.1_333165_333348_-	NA	NA|615aa|up_0|NZ_CP023592.1_333442_335287_-	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|537aa|down_0|NZ_CP023592.1_339351_340962_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP023592.1_340985_341894_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP023592.1_342117_344013_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP023592.1_344009_345626_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP023592.1_345622_349615_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP023592.1_349611_349920_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP023592.1_349922_351464_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP023592.1_351512_351806_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP023592.1_351835_352126_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP023592.1_352136_353024_+	pfam14011, ESX-1_EspG, EspG family
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	3	366451-367149	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	366739-366780|366814-366846	NZ_CP023592.1_374770-374811|NZ_CP023592.1_373585-373617	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP023592.1_363463_363766_+,NA|161aa|down_1|NZ_CP023592.1_376559_377042_-,NA|410aa|down_5|NZ_CP023592.1_379158_380388_+	NA|262aa|up_9|NZ_CP023592.1_358158_358944_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP023592.1_358932_359736_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP023592.1_359745_361143_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP023592.1_361321_363097_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP023592.1_363239_363467_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP023592.1_363463_363766_+	NA	NA|74aa|up_3|NZ_CP023592.1_363813_364035_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP023592.1_364031_364457_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP023592.1_364592_365225_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP023592.1_365221_366130_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP023592.1_375900_376572_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP023592.1_376559_377042_-	NA	NA|239aa|down_2|NZ_CP023592.1_377099_377816_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP023592.1_377917_378574_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP023592.1_378643_379135_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP023592.1_379158_380388_+	NA	NA|621aa|down_6|NZ_CP023592.1_380542_382405_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP023592.1_382476_382863_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP023592.1_382865_383528_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP023592.1_383588_384473_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	4	631192-631329	1	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGACCACGCCGGTG	18	2	3	631210-631227|631210-631227|631294-631311	NZ_CP023592.1_22466-22483|NZ_CP023592.1_1411934-1411951|NZ_CP023592.1_973124-973141	NA	3	3	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|54aa|up_7|NZ_CP023592.1_622030_622192_-,NA|478aa|up_0|NZ_CP023592.1_628207_629641_-,NA|450aa|down_2|NZ_CP023592.1_632964_634314_-,NA|93aa|down_5|NZ_CP023592.1_635844_636123_-	NA|325aa|up_9|NZ_CP023592.1_619800_620775_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|406aa|up_8|NZ_CP023592.1_620816_622034_+	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|54aa|up_7|NZ_CP023592.1_622030_622192_-	NA	NA|106aa|up_6|NZ_CP023592.1_622238_622556_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|595aa|up_5|NZ_CP023592.1_622702_624487_+	pfam00934, PE, PE family	NA|336aa|up_4|NZ_CP023592.1_624382_625390_-	TIGR00747, 3-oxoacyl-_synthase_3, 3-oxoacyl-(acyl-carrier-protein) synthase III	NA|293aa|up_3|NZ_CP023592.1_625471_626350_-	TIGR00751, 14-dihydroxy-2-naphthoate_octaprenyltransferase, 1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA|265aa|up_2|NZ_CP023592.1_626366_627161_+	PRK07823, PRK07823, S-methyl-5'-thioadenosine phosphorylase	NA|347aa|up_1|NZ_CP023592.1_627157_628198_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|478aa|up_0|NZ_CP023592.1_628207_629641_-	NA	NA|211aa|down_0|NZ_CP023592.1_631652_632285_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|221aa|down_1|NZ_CP023592.1_632281_632944_+	COG3222, COG3222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_2|NZ_CP023592.1_632964_634314_-	NA	NA|381aa|down_3|NZ_CP023592.1_634325_635468_-	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase	NA|101aa|down_4|NZ_CP023592.1_635482_635785_-	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|93aa|down_5|NZ_CP023592.1_635844_636123_-	NA	NA|418aa|down_6|NZ_CP023592.1_636119_637373_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|129aa|down_7|NZ_CP023592.1_637492_637879_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|295aa|down_8|NZ_CP023592.1_637941_638826_-	PRK05866, PRK05866, SDR family oxidoreductase	NA|301aa|down_9|NZ_CP023592.1_638921_639824_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	5	691899-691975	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP023592.1_677583_677799_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP023592.1_677795_678203_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP023592.1_678262_678949_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP023592.1_679102_681736_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP023592.1_681758_684146_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP023592.1_684283_685006_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP023592.1_685002_685800_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP023592.1_685801_686689_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP023592.1_686694_687909_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP023592.1_688932_690378_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP023592.1_693110_694661_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP023592.1_694712_695105_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP023592.1_695101_695359_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP023592.1_695541_696777_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP023592.1_697027_697441_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP023592.1_697437_697674_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP023592.1_697777_698284_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP023592.1_698397_698868_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP023592.1_698911_699673_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP023592.1_699729_700041_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	6	926495-927442	2	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	927278-927313|927278-927313|927278-927313	NZ_CP023592.1_675002-674967|NZ_CP023592.1_1213615-1213650|NZ_CP023592.1_2423609-2423574	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP023592.1_931452_932004_-,NA|81aa|down_8|NZ_CP023592.1_937467_937710_+	NA|685aa|up_9|NZ_CP023592.1_914131_916186_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP023592.1_916351_917521_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP023592.1_917608_918625_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP023592.1_918786_919428_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP023592.1_919508_920564_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP023592.1_920615_921008_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP023592.1_921065_921488_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP023592.1_921449_921740_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP023592.1_921844_922750_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP023592.1_922768_923584_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|883aa|down_0|NZ_CP023592.1_927711_930360_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP023592.1_930827_931472_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP023592.1_931452_932004_-	NA	NA|218aa|down_3|NZ_CP023592.1_932153_932807_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP023592.1_932877_933906_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP023592.1_934594_935365_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP023592.1_935451_936264_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP023592.1_936331_937192_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP023592.1_937467_937710_+	NA	NA|431aa|down_9|NZ_CP023592.1_937986_939279_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	7	1191182-1191290	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP023592.1_1180549_1182181_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP023592.1_1182256_1183321_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP023592.1_1183373_1183847_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP023592.1_1183880_1184744_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP023592.1_1184748_1185606_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP023592.1_1185606_1186689_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP023592.1_1186769_1187189_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP023592.1_1187300_1187867_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP023592.1_1187863_1188259_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP023592.1_1188286_1190290_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP023592.1_1192375_1194139_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP023592.1_1194135_1194909_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP023592.1_1194920_1195958_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP023592.1_1196144_1196981_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP023592.1_1197096_1197948_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP023592.1_1198021_1199239_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP023592.1_1199291_1200236_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP023592.1_1200458_1201526_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP023592.1_1201582_1202977_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP023592.1_1203178_1203901_+	pfam06271, RDD, RDD family
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	8	1211816-1212672	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	71	1212199-1212220|1212244-1212259|1212382-1212403|1212382-1212403|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517|1212499-1212517	NZ_CP023592.1_2960374-2960353|NZ_CP023592.1_2088488-2088473|NZ_CP023592.1_837307-837328|NZ_CP023592.1_1217510-1217531|NZ_CP023592.1_674666-674648|NZ_CP023592.1_1213342-1213360|NZ_CP023592.1_1217483-1217501|NZ_CP023592.1_1217555-1217573|NZ_CP023592.1_1630572-1630554|NZ_CP023592.1_1633398-1633380|NZ_CP023592.1_1990692-1990674|NZ_CP023592.1_2061416-2061398|NZ_CP023592.1_2061863-2061845|NZ_CP023592.1_2061962-2061944|NZ_CP023592.1_2801923-2801905|NZ_CP023592.1_2805451-2805433|NZ_CP023592.1_150188-150206|NZ_CP023592.1_333788-333770|NZ_CP023592.1_335207-335189|NZ_CP023592.1_335660-335642|NZ_CP023592.1_335711-335693|NZ_CP023592.1_335720-335702|NZ_CP023592.1_337991-337973|NZ_CP023592.1_338387-338369|NZ_CP023592.1_338416-338434|NZ_CP023592.1_338510-338492|NZ_CP023592.1_363041-363023|NZ_CP023592.1_443371-443353|NZ_CP023592.1_546703-546685|NZ_CP023592.1_623893-623911|NZ_CP023592.1_624115-624133|NZ_CP023592.1_673832-673814|NZ_CP023592.1_840090-840108|NZ_CP023592.1_1090862-1090880|NZ_CP023592.1_1091510-1091528|NZ_CP023592.1_1095568-1095550|NZ_CP023592.1_1212871-1212889|NZ_CP023592.1_1213261-1213279|NZ_CP023592.1_1217903-1217921|NZ_CP023592.1_1489082-1489064|NZ_CP023592.1_1618988-1618970|NZ_CP023592.1_1635911-1635893|NZ_CP023592.1_1635920-1635902|NZ_CP023592.1_1864184-1864166|NZ_CP023592.1_1864712-1864694|NZ_CP023592.1_1989966-1989948|NZ_CP023592.1_2001328-2001346|NZ_CP023592.1_2088686-2088668|NZ_CP023592.1_2303385-2303367|NZ_CP023592.1_2356837-2356819|NZ_CP023592.1_2419435-2419453|NZ_CP023592.1_2423522-2423504|NZ_CP023592.1_2569016-2568998|NZ_CP023592.1_2693314-2693332|NZ_CP023592.1_2795238-2795220|NZ_CP023592.1_2795820-2795802|NZ_CP023592.1_3054410-3054428|NZ_CP023592.1_3054509-3054527|NZ_CP023592.1_3705325-3705343|NZ_CP023592.1_3737302-3737284|NZ_CP023592.1_3737926-3737908|NZ_CP023592.1_3738169-3738151|NZ_CP023592.1_3738302-3738284|NZ_CP023592.1_3802164-3802182|NZ_CP023592.1_3802347-3802365|NZ_CP023592.1_3802515-3802533|NZ_CP023592.1_3930337-3930355|NZ_CP023592.1_3932067-3932085|NZ_CP023592.1_3940574-3940592|NZ_CP023592.1_4031548-4031530|NZ_CP023592.1_4094068-4094086	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP023592.1_1207248_1207515_+,NA|61aa|down_3|NZ_CP023592.1_1215090_1215273_+,NA|35aa|down_4|NZ_CP023592.1_1215382_1215487_+	NA|465aa|up_9|NZ_CP023592.1_1201582_1202977_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP023592.1_1203178_1203901_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP023592.1_1203932_1205099_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP023592.1_1205169_1205664_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP023592.1_1205849_1206284_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP023592.1_1206385_1207252_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP023592.1_1207248_1207515_+	NA	NA|674aa|up_2|NZ_CP023592.1_1207501_1209523_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP023592.1_1209621_1210350_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP023592.1_1210460_1211249_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP023592.1_1213905_1214226_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP023592.1_1214378_1214813_+	pfam00934, PE, PE family	NA|55aa|down_2|NZ_CP023592.1_1214914_1215079_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP023592.1_1215090_1215273_+	NA	NA|35aa|down_4|NZ_CP023592.1_1215382_1215487_+	NA	NA|152aa|down_5|NZ_CP023592.1_1215464_1215920_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP023592.1_1216334_1218896_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP023592.1_1219113_1220052_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP023592.1_1220439_1221720_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP023592.1_1221824_1222652_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	9	1572058-1573130	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP023592.1_1563821_1564139_+,NA	NA|103aa|up_9|NZ_CP023592.1_1561336_1561645_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP023592.1_1561641_1563261_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP023592.1_1563821_1564139_+	NA	NA|209aa|up_6|NZ_CP023592.1_1564273_1564900_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP023592.1_1564965_1565298_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP023592.1_1565313_1566570_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP023592.1_1566697_1567909_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP023592.1_1567981_1569460_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP023592.1_1569456_1570842_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP023592.1_1570919_1571954_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP023592.1_1573984_1574386_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP023592.1_1574382_1574640_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP023592.1_1574722_1575682_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP023592.1_1575706_1576669_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP023592.1_1576802_1577405_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP023592.1_1577485_1579453_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP023592.1_1579470_1580295_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP023592.1_1580463_1580946_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP023592.1_1581017_1581842_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP023592.1_1582038_1582977_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	10	2088158-2088412	3	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2088239-2088256|2088239-2088256|2088329-2088346	NZ_CP023592.1_401066-401049|NZ_CP023592.1_607348-607331|NZ_CP023592.1_3450025-3450008	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP023592.1_2087517_2087781_-,NA	NA|165aa|up_9|NZ_CP023592.1_2073811_2074306_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP023592.1_2074709_2075387_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP023592.1_2075745_2078571_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP023592.1_2078797_2079658_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP023592.1_2079698_2080565_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP023592.1_2080569_2082456_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP023592.1_2082471_2084505_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP023592.1_2084624_2086850_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP023592.1_2087125_2087521_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP023592.1_2087517_2087781_-	NA	NA|346aa|down_0|NZ_CP023592.1_2089549_2090587_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP023592.1_2090586_2091954_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP023592.1_2092127_2093564_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP023592.1_2093599_2095051_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP023592.1_2095080_2096031_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP023592.1_2096045_2096462_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP023592.1_2096739_2097162_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP023592.1_2097210_2097513_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP023592.1_2097509_2097824_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP023592.1_2097823_2099557_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	11	2163250-2163354	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CAACCCAAACGGATTAATCGCGAAACCAGGGATCGT	36	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023592.1_2159794_2160202_-,NA|127aa|down_6|NZ_CP023592.1_2176422_2176803_-	NA|216aa|up_9|NZ_CP023592.1_2153108_2153756_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023592.1_2153762_2155985_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023592.1_2156022_2156466_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023592.1_2156579_2157173_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023592.1_2157255_2157861_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023592.1_2157960_2158965_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023592.1_2159064_2159817_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023592.1_2159794_2160202_-	NA	NA|368aa|up_1|NZ_CP023592.1_2160336_2161440_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_0|NZ_CP023592.1_2161439_2162636_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|988aa|down_0|NZ_CP023592.1_2167521_2170485_-	pfam00823, PPE, PPE family	NA|155aa|down_1|NZ_CP023592.1_2170933_2171398_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_2|NZ_CP023592.1_2171495_2172359_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_3|NZ_CP023592.1_2172396_2173668_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_4|NZ_CP023592.1_2173939_2175055_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_5|NZ_CP023592.1_2175045_2176386_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_6|NZ_CP023592.1_2176422_2176803_-	NA	NA|621aa|down_7|NZ_CP023592.1_2176959_2178822_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_8|NZ_CP023592.1_2178829_2179309_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_9|NZ_CP023592.1_2179545_2180319_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	12	2168687-2168906	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023592.1_2159794_2160202_-,NA|127aa|down_5|NZ_CP023592.1_2176422_2176803_-	NA|216aa|up_9|NZ_CP023592.1_2153108_2153756_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023592.1_2153762_2155985_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023592.1_2156022_2156466_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023592.1_2156579_2157173_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023592.1_2157255_2157861_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023592.1_2157960_2158965_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023592.1_2159064_2159817_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023592.1_2159794_2160202_-	NA	NA|368aa|up_1|NZ_CP023592.1_2160336_2161440_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_0|NZ_CP023592.1_2161439_2162636_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|155aa|down_0|NZ_CP023592.1_2170933_2171398_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP023592.1_2171495_2172359_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP023592.1_2172396_2173668_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP023592.1_2173939_2175055_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP023592.1_2175045_2176386_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP023592.1_2176422_2176803_-	NA	NA|621aa|down_6|NZ_CP023592.1_2176959_2178822_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP023592.1_2178829_2179309_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP023592.1_2179545_2180319_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP023592.1_2180322_2181090_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	13	3119001-3120355	3,8,4	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-D,Type III-C,Type III-B	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	16,17,18	18	TypeIII-A,TypeIII-D,TypeIII-C,TypeIII-B	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP023592.1_3112280_3112535_-,NA|135aa|up_7|NZ_CP023592.1_3112682_3113087_+,NA|64aa|up_6|NZ_CP023592.1_3113083_3113275_+,NA|86aa|up_4|NZ_CP023592.1_3114861_3115119_+,NA|104aa|up_3|NZ_CP023592.1_3115223_3115535_+,NA|203aa|up_2|NZ_CP023592.1_3115954_3116563_+,NA	NA|92aa|up_9|NZ_CP023592.1_3111829_3112105_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP023592.1_3112280_3112535_-	NA	NA|135aa|up_7|NZ_CP023592.1_3112682_3113087_+	NA	NA|64aa|up_6|NZ_CP023592.1_3113083_3113275_+	NA	NA|385aa|up_5|NZ_CP023592.1_3113473_3114628_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP023592.1_3114861_3115119_+	NA	NA|104aa|up_3|NZ_CP023592.1_3115223_3115535_+	NA	NA|203aa|up_2|NZ_CP023592.1_3115954_3116563_+	NA	NA|470aa|up_1|NZ_CP023592.1_3116633_3118043_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP023592.1_3118039_3118852_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP023592.1_3120381_3121643_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP023592.1_3123440_3123782_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP023592.1_3123782_3124799_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP023592.1_3124811_3125960_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP023592.1_3126055_3127183_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP023592.1_3127179_3128088_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP023592.1_3128068_3128779_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP023592.1_3128788_3129163_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_8|NZ_CP023592.1_3129159_3131598_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP023592.1_3131594_3132317_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	14	3121678-3123392	9,5,4,5	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-D,Type III-C,Type III-B	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A:II-B,III-A	23,23,20,20	23	TypeIII-A,TypeIII-D,TypeIII-C,TypeIII-B	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP023592.1_3112280_3112535_-,NA|135aa|up_8|NZ_CP023592.1_3112682_3113087_+,NA|64aa|up_7|NZ_CP023592.1_3113083_3113275_+,NA|86aa|up_5|NZ_CP023592.1_3114861_3115119_+,NA|104aa|up_4|NZ_CP023592.1_3115223_3115535_+,NA|203aa|up_3|NZ_CP023592.1_3115954_3116563_+,NA	NA|85aa|up_9|NZ_CP023592.1_3112280_3112535_-	NA	NA|135aa|up_8|NZ_CP023592.1_3112682_3113087_+	NA	NA|64aa|up_7|NZ_CP023592.1_3113083_3113275_+	NA	NA|385aa|up_6|NZ_CP023592.1_3113473_3114628_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP023592.1_3114861_3115119_+	NA	NA|104aa|up_4|NZ_CP023592.1_3115223_3115535_+	NA	NA|203aa|up_3|NZ_CP023592.1_3115954_3116563_+	NA	NA|470aa|up_2|NZ_CP023592.1_3116633_3118043_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP023592.1_3118039_3118852_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP023592.1_3120381_3121643_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP023592.1_3123440_3123782_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP023592.1_3123782_3124799_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP023592.1_3124811_3125960_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP023592.1_3126055_3127183_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP023592.1_3127179_3128088_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP023592.1_3128068_3128779_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP023592.1_3128788_3129163_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_7|NZ_CP023592.1_3129159_3131598_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP023592.1_3131594_3132317_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP023592.1_3132716_3133262_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	15	3740496-3741037	6	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP023592.1_3755138_3755426_-,NA|87aa|down_9|NZ_CP023592.1_3768546_3768807_-	NA|282aa|up_9|NZ_CP023592.1_3719747_3720593_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP023592.1_3721067_3721508_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP023592.1_3721541_3722411_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP023592.1_3722431_3723442_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP023592.1_3723726_3724359_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP023592.1_3724425_3725655_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP023592.1_3725937_3727287_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP023592.1_3727298_3728438_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP023592.1_3728434_3729166_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_0|NZ_CP023592.1_3729174_3736746_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP023592.1_3743008_3743266_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP023592.1_3743521_3752995_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP023592.1_3753620_3754067_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP023592.1_3754103_3754844_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP023592.1_3755138_3755426_-	NA	NA|3717aa|down_5|NZ_CP023592.1_3755762_3766913_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP023592.1_3767156_3767951_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP023592.1_3768032_3768404_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_8|NZ_CP023592.1_3768301_3768520_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP023592.1_3768546_3768807_-	NA
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	16	3762294-3762420	6	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTTGCCGATGCCGGTGTTGAAA	22	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|96aa|up_0|NZ_CP023592.1_3755138_3755426_-,NA|87aa|down_3|NZ_CP023592.1_3768546_3768807_-	NA|410aa|up_9|NZ_CP023592.1_3724425_3725655_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_8|NZ_CP023592.1_3725937_3727287_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_7|NZ_CP023592.1_3727298_3728438_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_6|NZ_CP023592.1_3728434_3729166_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_5|NZ_CP023592.1_3729174_3736746_-	pfam00823, PPE, PPE family	NA|86aa|up_4|NZ_CP023592.1_3743008_3743266_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|up_3|NZ_CP023592.1_3743521_3752995_-	pfam00823, PPE, PPE family	NA|149aa|up_2|NZ_CP023592.1_3753620_3754067_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|up_1|NZ_CP023592.1_3754103_3754844_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|up_0|NZ_CP023592.1_3755138_3755426_-	NA	NA|265aa|down_0|NZ_CP023592.1_3767156_3767951_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_1|NZ_CP023592.1_3768032_3768404_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_2|NZ_CP023592.1_3768301_3768520_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_3|NZ_CP023592.1_3768546_3768807_-	NA	NA|130aa|down_4|NZ_CP023592.1_3768921_3769311_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|98aa|down_5|NZ_CP023592.1_3769324_3769618_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|282aa|down_6|NZ_CP023592.1_3769614_3770460_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|92aa|down_7|NZ_CP023592.1_3770583_3770859_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|86aa|down_8|NZ_CP023592.1_3770855_3771113_+	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|397aa|down_9|NZ_CP023592.1_3771154_3772345_+	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	17	3948182-3949933	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCANCGGCGGCNNCGGCGGNNNCGGCGG	36	2	9	3948773-3948808|3948773-3948808|3948773-3948808|3948773-3948808|3948773-3948808|3949664-3949690|3949664-3949690|3949664-3949690|3949664-3949690	NZ_CP023592.1_3946889-3946924|NZ_CP023592.1_3947231-3947266|NZ_CP023592.1_3947822-3947857|NZ_CP023592.1_3948173-3948208|NZ_CP023592.1_3932622-3932657|NZ_CP023592.1_361981-362007|NZ_CP023592.1_3941075-3941101|NZ_CP023592.1_3941411-3941437|NZ_CP023592.1_3941757-3941783	NA	21	21	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP023592.1_3953248_3954088_+	NA|318aa|up_9|NZ_CP023592.1_3920895_3921849_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP023592.1_3921873_3922065_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP023592.1_3922279_3923482_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP023592.1_3923506_3924628_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP023592.1_3924698_3926207_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1385aa|up_4|NZ_CP023592.1_3926377_3930532_+	pfam00934, PE, PE family	NA|1902aa|up_3|NZ_CP023592.1_3930822_3936528_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP023592.1_3936694_3938242_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP023592.1_3938238_3939075_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP023592.1_3944909_3945566_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP023592.1_3950641_3952288_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP023592.1_3952361_3953153_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP023592.1_3953248_3954088_+	NA	NA|399aa|down_3|NZ_CP023592.1_3954142_3955339_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP023592.1_3955367_3956078_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP023592.1_3956142_3957186_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP023592.1_3957338_3958250_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP023592.1_3958265_3959330_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP023592.1_3959346_3960531_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP023592.1_3960572_3961604_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_002447255.1_ASM244725v1	NZ_CP023592	Mycobacterium tuberculosis strain SLM036 chromosome, complete genome	18	4110485-4110573	10	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP023592.1_4101071_4101842_-,NA|119aa|up_3|NZ_CP023592.1_4106976_4107333_+,NA|52aa|up_2|NZ_CP023592.1_4107432_4107588_+,NA|233aa|up_0|NZ_CP023592.1_4109589_4110288_-,NA|126aa|down_6|NZ_CP023592.1_4115808_4116186_+	NA|288aa|up_9|NZ_CP023592.1_4099453_4100317_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP023592.1_4101071_4101842_-	NA	NA|549aa|up_7|NZ_CP023592.1_4101838_4103485_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP023592.1_4103481_4104345_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP023592.1_4104337_4105264_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP023592.1_4105265_4106891_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP023592.1_4106976_4107333_+	NA	NA|52aa|up_2|NZ_CP023592.1_4107432_4107588_+	NA	NA|652aa|up_1|NZ_CP023592.1_4107598_4109554_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP023592.1_4109589_4110288_-	NA	NA|173aa|down_0|NZ_CP023592.1_4110633_4111152_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP023592.1_4111152_4112136_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP023592.1_4112128_4113322_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP023592.1_4113327_4114149_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP023592.1_4114280_4114964_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP023592.1_4114963_4115701_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP023592.1_4115808_4116186_+	NA	NA|225aa|down_7|NZ_CP023592.1_4116284_4116959_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP023592.1_4117064_4117859_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP023592.1_4117865_4118321_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
