The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023590	Mycobacterium tuberculosis strain TBV5362 chromosome, complete genome	4411331	2941007	2976373	4411331	integrase,terminase,capsid,head,protease,tRNA,transposase	Tupanvirus(11.11%)	41	2969808:2969835	2980790:2980817
WP_003413486.1|2941007_2943086_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943194_2943422_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943418_2944804_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945148_2945649_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945665_2946106_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946252_2946930_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946914_2947268_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947280_2947706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947702_2948377_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948454_2949276_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949411_2950305_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950307_2951126_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951140_2952322_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952380_2952812_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953325_2954567_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954876_2955239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955585_2956710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956711_2957251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957390_2958689_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958727_2959009_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959153_2959639_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959665_2959923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959923_2962260_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962288_2962531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962531_2963209_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963404_2964061_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964223_2964670_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964844_2965177_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965296_2965656_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965757_2966216_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966351_2966732_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966728_2968225_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968414_2968651_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968723_2968897_+	hypothetical protein	NA	NA	NA	NA	NA
2969808:2969835	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969941_2970373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072492633.1|2970369_2971368_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.5	1.1e-60
WP_003900539.1|2971381_2971846_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971978_2973239_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973613_2975053_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975060_2975594_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975746_2976373_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980790:2980817	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023590	Mycobacterium tuberculosis strain TBV5362 chromosome, complete genome	4411331	3710240	3796151	4411331	transposase,tRNA	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710240_3711501_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711556_3711718_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711739_3713269_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713201_3714140_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714148_3715516_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715584_3716802_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716897_3718406_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718402_3719554_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719744_3720590_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721064_3721505_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721538_3722408_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722428_3723439_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723723_3724356_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724422_3725652_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725934_3727284_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727295_3728435_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728431_3729163_+	methyltransferase	NA	NA	NA	NA	NA
WP_096865691.1|3729171_3736743_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3742987_3743245_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_096877280.1|3743500_3752974_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753599_3754046_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754082_3754823_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755117_3755405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755741_3766892_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767135_3767930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3768011_3768383_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768280_3768499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768525_3768786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768900_3769290_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769303_3769597_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769593_3770439_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770562_3770838_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770834_3771092_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771133_3772324_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772440_3772809_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772805_3773357_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773363_3773945_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773925_3774294_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774271_3774664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774660_3777291_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777526_3777991_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778357_3780124_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780124_3780769_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780767_3781202_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781290_3784530_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784721_3786062_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786103_3787279_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787332_3787437_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787515_3788157_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788157_3788406_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788410_3789838_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789945_3790599_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790637_3792143_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792147_3793038_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793046_3794657_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794601_3794847_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794889_3796151_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
