assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	1	333609-334407	1	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGNGCCGCCGGNN	18	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP023580.1_333124_333307_-,NA	NA|398aa|up_9|NZ_CP023580.1_323302_324496_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP023580.1_324531_326214_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP023580.1_326230_328426_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP023580.1_328539_329673_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP023580.1_329669_330290_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP023580.1_330386_330968_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP023580.1_330897_331623_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP023580.1_331712_332633_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP023580.1_332672_333101_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP023580.1_333124_333307_-	NA	NA|838aa|down_0|NZ_CP023580.1_336524_339038_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP023580.1_339328_340939_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP023580.1_340962_341871_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP023580.1_342094_343990_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP023580.1_343986_345603_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP023580.1_345599_349592_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP023580.1_349588_349897_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP023580.1_349899_351441_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP023580.1_351489_351783_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP023580.1_351812_352103_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	2	334465-334652	1	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGTTGCCGAACAACCACCCGCCGGCCCCGCCGGCAGCCCCGGT	44	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP023580.1_333124_333307_-,NA	NA|398aa|up_9|NZ_CP023580.1_323302_324496_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP023580.1_324531_326214_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP023580.1_326230_328426_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP023580.1_328539_329673_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP023580.1_329669_330290_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP023580.1_330386_330968_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP023580.1_330897_331623_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP023580.1_331712_332633_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP023580.1_332672_333101_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP023580.1_333124_333307_-	NA	NA|838aa|down_0|NZ_CP023580.1_336524_339038_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP023580.1_339328_340939_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP023580.1_340962_341871_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP023580.1_342094_343990_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP023580.1_343986_345603_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP023580.1_345599_349592_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP023580.1_349588_349897_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP023580.1_349899_351441_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP023580.1_351489_351783_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP023580.1_351812_352103_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	3	366428-367126	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	366716-366757|366791-366823	NZ_CP023580.1_374747-374788|NZ_CP023580.1_373562-373594	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP023580.1_363440_363743_+,NA|161aa|down_1|NZ_CP023580.1_376536_377019_-,NA|410aa|down_5|NZ_CP023580.1_379135_380365_+	NA|262aa|up_9|NZ_CP023580.1_358135_358921_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP023580.1_358909_359713_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP023580.1_359722_361120_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP023580.1_361298_363074_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP023580.1_363216_363444_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP023580.1_363440_363743_+	NA	NA|74aa|up_3|NZ_CP023580.1_363790_364012_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP023580.1_364008_364434_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP023580.1_364569_365202_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP023580.1_365198_366107_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP023580.1_375877_376549_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP023580.1_376536_377019_-	NA	NA|239aa|down_2|NZ_CP023580.1_377076_377793_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP023580.1_377894_378551_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP023580.1_378620_379112_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP023580.1_379135_380365_+	NA	NA|621aa|down_6|NZ_CP023580.1_380519_382382_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP023580.1_382453_382840_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP023580.1_382842_383505_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP023580.1_383565_384450_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	4	631213-631350	2	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGACCACGCCGGTG	18	2	3	631231-631248|631231-631248|631315-631332	NZ_CP023580.1_22466-22483|NZ_CP023580.1_1412013-1412030|NZ_CP023580.1_973178-973195	NA	3	3	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|54aa|up_7|NZ_CP023580.1_622051_622213_-,NA|478aa|up_0|NZ_CP023580.1_628228_629662_-,NA|450aa|down_2|NZ_CP023580.1_632985_634335_-,NA|93aa|down_5|NZ_CP023580.1_635865_636144_-	NA|325aa|up_9|NZ_CP023580.1_619821_620796_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|406aa|up_8|NZ_CP023580.1_620837_622055_+	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|54aa|up_7|NZ_CP023580.1_622051_622213_-	NA	NA|106aa|up_6|NZ_CP023580.1_622259_622577_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|595aa|up_5|NZ_CP023580.1_622723_624508_+	pfam00934, PE, PE family	NA|336aa|up_4|NZ_CP023580.1_624403_625411_-	TIGR00747, 3-oxoacyl-_synthase_3, 3-oxoacyl-(acyl-carrier-protein) synthase III	NA|293aa|up_3|NZ_CP023580.1_625492_626371_-	TIGR00751, 14-dihydroxy-2-naphthoate_octaprenyltransferase, 1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA|265aa|up_2|NZ_CP023580.1_626387_627182_+	PRK07823, PRK07823, S-methyl-5'-thioadenosine phosphorylase	NA|347aa|up_1|NZ_CP023580.1_627178_628219_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|478aa|up_0|NZ_CP023580.1_628228_629662_-	NA	NA|211aa|down_0|NZ_CP023580.1_631673_632306_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|221aa|down_1|NZ_CP023580.1_632302_632965_+	COG3222, COG3222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_2|NZ_CP023580.1_632985_634335_-	NA	NA|381aa|down_3|NZ_CP023580.1_634346_635489_-	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase	NA|101aa|down_4|NZ_CP023580.1_635503_635806_-	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|93aa|down_5|NZ_CP023580.1_635865_636144_-	NA	NA|418aa|down_6|NZ_CP023580.1_636140_637394_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|129aa|down_7|NZ_CP023580.1_637513_637900_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|295aa|down_8|NZ_CP023580.1_637962_638847_-	PRK05866, PRK05866, SDR family oxidoreductase	NA|301aa|down_9|NZ_CP023580.1_638942_639845_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	5	691962-692038	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|136aa|up_9|NZ_CP023580.1_677857_678265_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_8|NZ_CP023580.1_678324_679011_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_7|NZ_CP023580.1_679164_681798_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_6|NZ_CP023580.1_681820_684208_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_5|NZ_CP023580.1_684345_685068_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_4|NZ_CP023580.1_685064_685862_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_3|NZ_CP023580.1_685863_686751_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_2|NZ_CP023580.1_686756_687971_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_1|NZ_CP023580.1_688994_690440_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|479aa|up_0|NZ_CP023580.1_690436_691873_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP023580.1_693173_694724_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP023580.1_694775_695168_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP023580.1_695164_695422_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP023580.1_695604_696840_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP023580.1_697090_697504_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP023580.1_697500_697737_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP023580.1_697840_698347_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP023580.1_698460_698931_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP023580.1_698974_699736_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP023580.1_699792_700104_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	6	926558-927505	3	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	927341-927376|927341-927376|927341-927376	NZ_CP023580.1_675059-675024|NZ_CP023580.1_1213692-1213727|NZ_CP023580.1_2423728-2423693	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP023580.1_931506_932058_-,NA|81aa|down_8|NZ_CP023580.1_937521_937764_+	NA|685aa|up_9|NZ_CP023580.1_914194_916249_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP023580.1_916414_917584_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP023580.1_917671_918688_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP023580.1_918849_919491_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP023580.1_919571_920627_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP023580.1_920678_921071_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP023580.1_921128_921551_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP023580.1_921512_921803_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP023580.1_921907_922813_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP023580.1_922831_923647_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|880aa|down_0|NZ_CP023580.1_927774_930414_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP023580.1_930881_931526_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP023580.1_931506_932058_-	NA	NA|218aa|down_3|NZ_CP023580.1_932207_932861_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP023580.1_932931_933960_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP023580.1_934648_935419_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP023580.1_935505_936318_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP023580.1_936385_937246_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP023580.1_937521_937764_+	NA	NA|431aa|down_9|NZ_CP023580.1_938040_939333_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	7	1191259-1191367	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP023580.1_1180626_1182258_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP023580.1_1182333_1183398_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP023580.1_1183450_1183924_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP023580.1_1183957_1184821_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP023580.1_1184825_1185683_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP023580.1_1185683_1186766_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP023580.1_1186846_1187266_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP023580.1_1187377_1187944_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP023580.1_1187940_1188336_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP023580.1_1188363_1190367_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP023580.1_1192452_1194216_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP023580.1_1194212_1194986_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP023580.1_1194997_1196035_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP023580.1_1196221_1197058_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP023580.1_1197173_1198025_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP023580.1_1198098_1199316_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP023580.1_1199368_1200313_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP023580.1_1200535_1201603_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP023580.1_1201659_1203054_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP023580.1_1203255_1203978_+	pfam06271, RDD, RDD family
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	8	1211893-1212749	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	73	1212276-1212297|1212321-1212336|1212459-1212480|1212459-1212480|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594|1212576-1212594	NZ_CP023580.1_2960486-2960465|NZ_CP023580.1_2088577-2088562|NZ_CP023580.1_837371-837392|NZ_CP023580.1_1217587-1217608|NZ_CP023580.1_674723-674705|NZ_CP023580.1_840433-840451|NZ_CP023580.1_1213419-1213437|NZ_CP023580.1_1217560-1217578|NZ_CP023580.1_1217632-1217650|NZ_CP023580.1_1630649-1630631|NZ_CP023580.1_1633475-1633457|NZ_CP023580.1_1990786-1990768|NZ_CP023580.1_2061505-2061487|NZ_CP023580.1_2061952-2061934|NZ_CP023580.1_2062051-2062033|NZ_CP023580.1_2802035-2802017|NZ_CP023580.1_2805563-2805545|NZ_CP023580.1_150147-150165|NZ_CP023580.1_335166-335148|NZ_CP023580.1_335619-335601|NZ_CP023580.1_335670-335652|NZ_CP023580.1_335679-335661|NZ_CP023580.1_337968-337950|NZ_CP023580.1_338097-338079|NZ_CP023580.1_338364-338346|NZ_CP023580.1_338393-338411|NZ_CP023580.1_338487-338469|NZ_CP023580.1_363018-363000|NZ_CP023580.1_443377-443359|NZ_CP023580.1_546721-546703|NZ_CP023580.1_623914-623932|NZ_CP023580.1_624136-624154|NZ_CP023580.1_673889-673871|NZ_CP023580.1_840154-840172|NZ_CP023580.1_1090921-1090939|NZ_CP023580.1_1091569-1091587|NZ_CP023580.1_1095628-1095610|NZ_CP023580.1_1212948-1212966|NZ_CP023580.1_1213338-1213356|NZ_CP023580.1_1217980-1217998|NZ_CP023580.1_1489157-1489139|NZ_CP023580.1_1618613-1618595|NZ_CP023580.1_1619066-1619048|NZ_CP023580.1_1635988-1635970|NZ_CP023580.1_1635997-1635979|NZ_CP023580.1_1864277-1864259|NZ_CP023580.1_1864805-1864787|NZ_CP023580.1_1990060-1990042|NZ_CP023580.1_2001422-2001440|NZ_CP023580.1_2088775-2088757|NZ_CP023580.1_2303454-2303436|NZ_CP023580.1_2356901-2356883|NZ_CP023580.1_2419554-2419572|NZ_CP023580.1_2423641-2423623|NZ_CP023580.1_2569133-2569115|NZ_CP023580.1_2693428-2693446|NZ_CP023580.1_2795350-2795332|NZ_CP023580.1_2795932-2795914|NZ_CP023580.1_3054523-3054541|NZ_CP023580.1_3054622-3054640|NZ_CP023580.1_3705442-3705460|NZ_CP023580.1_3737420-3737402|NZ_CP023580.1_3738032-3738014|NZ_CP023580.1_3738275-3738257|NZ_CP023580.1_3738408-3738390|NZ_CP023580.1_3802271-3802289|NZ_CP023580.1_3802454-3802472|NZ_CP023580.1_3802622-3802640|NZ_CP023580.1_3930425-3930443|NZ_CP023580.1_3932155-3932173|NZ_CP023580.1_3940662-3940680|NZ_CP023580.1_4031640-4031622|NZ_CP023580.1_4094166-4094184	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP023580.1_1207325_1207592_+,NA|61aa|down_3|NZ_CP023580.1_1215167_1215350_+,NA|35aa|down_4|NZ_CP023580.1_1215459_1215564_+	NA|465aa|up_9|NZ_CP023580.1_1201659_1203054_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP023580.1_1203255_1203978_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP023580.1_1204009_1205176_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP023580.1_1205246_1205741_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP023580.1_1205926_1206361_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP023580.1_1206462_1207329_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP023580.1_1207325_1207592_+	NA	NA|674aa|up_2|NZ_CP023580.1_1207578_1209600_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP023580.1_1209698_1210427_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP023580.1_1210537_1211326_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP023580.1_1213982_1214303_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP023580.1_1214455_1214890_+	pfam00934, PE, PE family	NA|55aa|down_2|NZ_CP023580.1_1214991_1215156_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP023580.1_1215167_1215350_+	NA	NA|35aa|down_4|NZ_CP023580.1_1215459_1215564_+	NA	NA|152aa|down_5|NZ_CP023580.1_1215541_1215997_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP023580.1_1216411_1218973_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP023580.1_1219190_1220129_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP023580.1_1220516_1221797_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP023580.1_1221901_1222729_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	9	1572132-1573204	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP023580.1_1563895_1564213_+,NA	NA|103aa|up_9|NZ_CP023580.1_1561410_1561719_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP023580.1_1561715_1563335_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP023580.1_1563895_1564213_+	NA	NA|209aa|up_6|NZ_CP023580.1_1564347_1564974_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP023580.1_1565039_1565372_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP023580.1_1565387_1566644_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP023580.1_1566771_1567983_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP023580.1_1568055_1569534_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP023580.1_1569530_1570916_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP023580.1_1570993_1572028_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP023580.1_1574057_1574459_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP023580.1_1574455_1574713_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP023580.1_1574795_1575755_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP023580.1_1575779_1576742_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP023580.1_1576875_1577478_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP023580.1_1577558_1579526_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP023580.1_1579543_1580368_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP023580.1_1580536_1581019_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP023580.1_1581090_1581915_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP023580.1_1582111_1583050_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	10	2088247-2088501	4	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2088328-2088345|2088328-2088345|2088418-2088435	NZ_CP023580.1_401043-401026|NZ_CP023580.1_607369-607352|NZ_CP023580.1_3450137-3450120	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP023580.1_2087606_2087870_-,NA	NA|165aa|up_9|NZ_CP023580.1_2073900_2074395_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP023580.1_2074798_2075476_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP023580.1_2075834_2078660_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP023580.1_2078886_2079747_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP023580.1_2079787_2080654_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP023580.1_2080658_2082545_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP023580.1_2082560_2084594_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP023580.1_2084713_2086939_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP023580.1_2087214_2087610_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP023580.1_2087606_2087870_-	NA	NA|346aa|down_0|NZ_CP023580.1_2089638_2090676_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP023580.1_2090675_2092043_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP023580.1_2092216_2093653_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP023580.1_2093688_2095140_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP023580.1_2095169_2096120_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP023580.1_2096134_2096551_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP023580.1_2096828_2097251_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP023580.1_2097299_2097602_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP023580.1_2097598_2097913_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP023580.1_2097912_2099646_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	11	2163340-2163444	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CAACCCAAACGGATTAATCGCGAAACCAGGGATCGT	36	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|157aa|up_9|NZ_CP023580.1_2152387_2152858_-,NA|136aa|up_1|NZ_CP023580.1_2159883_2160291_-,NA|127aa|down_6|NZ_CP023580.1_2176513_2176894_-	NA|157aa|up_9|NZ_CP023580.1_2152387_2152858_-	NA	NA|216aa|up_8|NZ_CP023580.1_2153197_2153845_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_7|NZ_CP023580.1_2153851_2156074_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_6|NZ_CP023580.1_2156111_2156555_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_5|NZ_CP023580.1_2156668_2157262_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_4|NZ_CP023580.1_2157344_2157950_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_3|NZ_CP023580.1_2158049_2159054_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_2|NZ_CP023580.1_2159153_2159906_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_1|NZ_CP023580.1_2159883_2160291_-	NA	NA|767aa|up_0|NZ_CP023580.1_2160425_2162726_+	PLN02892, PLN02892, isocitrate lyase	NA|988aa|down_0|NZ_CP023580.1_2167612_2170576_-	pfam00823, PPE, PPE family	NA|155aa|down_1|NZ_CP023580.1_2171024_2171489_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_2|NZ_CP023580.1_2171586_2172450_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_3|NZ_CP023580.1_2172487_2173759_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_4|NZ_CP023580.1_2174030_2175146_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_5|NZ_CP023580.1_2175136_2176477_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_6|NZ_CP023580.1_2176513_2176894_-	NA	NA|621aa|down_7|NZ_CP023580.1_2177050_2178913_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_8|NZ_CP023580.1_2178920_2179400_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_9|NZ_CP023580.1_2179636_2180410_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	12	2168778-2168997	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023580.1_2159883_2160291_-,NA|127aa|down_5|NZ_CP023580.1_2176513_2176894_-	NA|216aa|up_9|NZ_CP023580.1_2153197_2153845_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023580.1_2153851_2156074_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023580.1_2156111_2156555_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023580.1_2156668_2157262_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023580.1_2157344_2157950_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023580.1_2158049_2159054_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023580.1_2159153_2159906_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023580.1_2159883_2160291_-	NA	NA|767aa|up_1|NZ_CP023580.1_2160425_2162726_+	PLN02892, PLN02892, isocitrate lyase	NA|1460aa|up_0|NZ_CP023580.1_2162895_2167275_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP023580.1_2171024_2171489_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP023580.1_2171586_2172450_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP023580.1_2172487_2173759_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP023580.1_2174030_2175146_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP023580.1_2175136_2176477_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP023580.1_2176513_2176894_-	NA	NA|621aa|down_6|NZ_CP023580.1_2177050_2178913_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP023580.1_2178920_2179400_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP023580.1_2179636_2180410_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|215aa|down_9|NZ_CP023580.1_2181203_2181848_-	TIGR03085, TIGR03085, TIGR03085 family protein
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	13	3119114-3120468	2,8,5	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-C,Type III-B,Type III-A,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	16,17,18	18	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP023580.1_3112393_3112648_-,NA|135aa|up_7|NZ_CP023580.1_3112795_3113200_+,NA|64aa|up_6|NZ_CP023580.1_3113196_3113388_+,NA|86aa|up_4|NZ_CP023580.1_3114974_3115232_+,NA|104aa|up_3|NZ_CP023580.1_3115336_3115648_+,NA|203aa|up_2|NZ_CP023580.1_3116067_3116676_+,NA	NA|92aa|up_9|NZ_CP023580.1_3111942_3112218_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP023580.1_3112393_3112648_-	NA	NA|135aa|up_7|NZ_CP023580.1_3112795_3113200_+	NA	NA|64aa|up_6|NZ_CP023580.1_3113196_3113388_+	NA	NA|385aa|up_5|NZ_CP023580.1_3113586_3114741_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP023580.1_3114974_3115232_+	NA	NA|104aa|up_3|NZ_CP023580.1_3115336_3115648_+	NA	NA|203aa|up_2|NZ_CP023580.1_3116067_3116676_+	NA	NA|470aa|up_1|NZ_CP023580.1_3116746_3118156_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP023580.1_3118152_3118965_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP023580.1_3120494_3121756_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP023580.1_3123553_3123895_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP023580.1_3123895_3124912_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP023580.1_3124924_3126073_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP023580.1_3126168_3127296_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP023580.1_3127292_3128201_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP023580.1_3128181_3128892_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP023580.1_3128901_3129276_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_8|NZ_CP023580.1_3129272_3131711_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP023580.1_3131707_3132430_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	14	3121791-3123505	9,6,3	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-C,Type III-B,Type III-A,Type III-D	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP023580.1_3112393_3112648_-,NA|135aa|up_8|NZ_CP023580.1_3112795_3113200_+,NA|64aa|up_7|NZ_CP023580.1_3113196_3113388_+,NA|86aa|up_5|NZ_CP023580.1_3114974_3115232_+,NA|104aa|up_4|NZ_CP023580.1_3115336_3115648_+,NA|203aa|up_3|NZ_CP023580.1_3116067_3116676_+,NA	NA|85aa|up_9|NZ_CP023580.1_3112393_3112648_-	NA	NA|135aa|up_8|NZ_CP023580.1_3112795_3113200_+	NA	NA|64aa|up_7|NZ_CP023580.1_3113196_3113388_+	NA	NA|385aa|up_6|NZ_CP023580.1_3113586_3114741_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP023580.1_3114974_3115232_+	NA	NA|104aa|up_4|NZ_CP023580.1_3115336_3115648_+	NA	NA|203aa|up_3|NZ_CP023580.1_3116067_3116676_+	NA	NA|470aa|up_2|NZ_CP023580.1_3116746_3118156_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP023580.1_3118152_3118965_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP023580.1_3120494_3121756_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP023580.1_3123553_3123895_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP023580.1_3123895_3124912_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP023580.1_3124924_3126073_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP023580.1_3126168_3127296_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP023580.1_3127292_3128201_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP023580.1_3128181_3128892_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP023580.1_3128901_3129276_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_7|NZ_CP023580.1_3129272_3131711_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP023580.1_3131707_3132430_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP023580.1_3132829_3133375_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	15	3740602-3741143	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP023580.1_3755244_3755532_-,NA|87aa|down_9|NZ_CP023580.1_3768652_3768913_-	NA|282aa|up_9|NZ_CP023580.1_3719865_3720711_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP023580.1_3721185_3721626_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP023580.1_3721659_3722529_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP023580.1_3722549_3723560_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP023580.1_3723844_3724477_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP023580.1_3724543_3725773_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP023580.1_3726055_3727405_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP023580.1_3727416_3728556_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP023580.1_3728552_3729284_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_0|NZ_CP023580.1_3729292_3736864_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP023580.1_3743114_3743372_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP023580.1_3743627_3753101_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP023580.1_3753726_3754173_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP023580.1_3754209_3754950_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP023580.1_3755244_3755532_-	NA	NA|3717aa|down_5|NZ_CP023580.1_3755868_3767019_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP023580.1_3767262_3768057_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP023580.1_3768138_3768510_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_8|NZ_CP023580.1_3768407_3768626_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP023580.1_3768652_3768913_-	NA
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	16	3948270-3950021	8	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCACCGGCGGCNNCGGCGGNNNCGGCGG	36	2	9	3948861-3948896|3948861-3948896|3948861-3948896|3948861-3948896|3948861-3948896|3949752-3949778|3949752-3949778|3949752-3949778|3949752-3949778	NZ_CP023580.1_3946977-3947012|NZ_CP023580.1_3947319-3947354|NZ_CP023580.1_3947910-3947945|NZ_CP023580.1_3948261-3948296|NZ_CP023580.1_3932710-3932745|NZ_CP023580.1_361958-361984|NZ_CP023580.1_3941163-3941189|NZ_CP023580.1_3941499-3941525|NZ_CP023580.1_3941845-3941871	NA	21	21	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP023580.1_3953336_3954176_+	NA|318aa|up_9|NZ_CP023580.1_3921001_3921955_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP023580.1_3921979_3922171_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP023580.1_3922385_3923588_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP023580.1_3923612_3924734_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP023580.1_3924804_3926313_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1379aa|up_4|NZ_CP023580.1_3926483_3930620_+	pfam00934, PE, PE family	NA|1902aa|up_3|NZ_CP023580.1_3930910_3936616_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP023580.1_3936782_3938330_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP023580.1_3938326_3939163_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP023580.1_3944997_3945654_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP023580.1_3950729_3952376_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP023580.1_3952449_3953241_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP023580.1_3953336_3954176_+	NA	NA|399aa|down_3|NZ_CP023580.1_3954230_3955427_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP023580.1_3955455_3956166_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP023580.1_3956230_3957274_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP023580.1_3957426_3958338_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP023580.1_3958353_3959418_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|344aa|down_8|NZ_CP023580.1_3960660_3961692_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD	NA|175aa|down_9|NZ_CP023580.1_3961705_3962230_-	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]
GCF_002447015.1_ASM244701v1	NZ_CP023580	Mycobacterium tuberculosis strain LN180 chromosome, complete genome	17	4110583-4110671	10	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP023580.1_4101169_4101940_-,NA|119aa|up_3|NZ_CP023580.1_4107074_4107431_+,NA|52aa|up_2|NZ_CP023580.1_4107530_4107686_+,NA|233aa|up_0|NZ_CP023580.1_4109687_4110386_-,NA|126aa|down_6|NZ_CP023580.1_4115906_4116284_+	NA|288aa|up_9|NZ_CP023580.1_4099551_4100415_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP023580.1_4101169_4101940_-	NA	NA|549aa|up_7|NZ_CP023580.1_4101936_4103583_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP023580.1_4103579_4104443_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP023580.1_4104435_4105362_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP023580.1_4105363_4106989_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP023580.1_4107074_4107431_+	NA	NA|52aa|up_2|NZ_CP023580.1_4107530_4107686_+	NA	NA|652aa|up_1|NZ_CP023580.1_4107696_4109652_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP023580.1_4109687_4110386_-	NA	NA|173aa|down_0|NZ_CP023580.1_4110731_4111250_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP023580.1_4111250_4112234_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP023580.1_4112226_4113420_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP023580.1_4113425_4114247_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP023580.1_4114378_4115062_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP023580.1_4115061_4115799_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP023580.1_4115906_4116284_+	NA	NA|225aa|down_7|NZ_CP023580.1_4116382_4117057_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP023580.1_4117160_4117955_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP023580.1_4117961_4118417_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
