The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023578	Mycobacterium tuberculosis strain LE486 chromosome, complete genome	4411180	2940888	2976254	4411180	terminase,integrase,transposase,head,protease,tRNA,capsid	Tupanvirus(11.11%)	40	2969691:2969718	2980671:2980698
WP_003413486.1|2940888_2942967_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943075_2943303_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096865268.1|2943299_2944685_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945029_2945530_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003906873.1|2945546_2945987_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946133_2946811_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946795_2947149_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947161_2947587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947583_2948258_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948335_2949157_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949292_2950186_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950188_2951007_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951021_2952203_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952261_2952693_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953206_2954448_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954757_2955120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955466_2956591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956592_2957132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957271_2958570_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958608_2958890_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959034_2959520_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959546_2959804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899405.1|2962171_2962414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962414_2963092_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963287_2963944_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964106_2964553_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964727_2965060_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965179_2965539_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965640_2966099_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966234_2966615_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966611_2968108_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968297_2968534_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968606_2968780_+	hypothetical protein	NA	NA	NA	NA	NA
2969691:2969718	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969824_2970256_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970252_2971251_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971264_2971729_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971861_2973122_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973494_2974934_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2974941_2975475_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975627_2976254_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980671:2980698	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023578	Mycobacterium tuberculosis strain LE486 chromosome, complete genome	4411180	3710117	3796027	4411180	transposase,tRNA	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710117_3711378_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711433_3711595_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711616_3713146_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_070892666.1|3713078_3714017_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714025_3715393_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715461_3716679_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716774_3718283_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718279_3719431_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719621_3720467_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3720941_3721382_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721415_3722285_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722305_3723316_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723600_3724233_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724299_3725529_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725811_3727161_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727172_3728312_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728308_3729040_+	methyltransferase	NA	NA	NA	NA	NA
WP_096865259.1|3729048_3736620_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3742863_3743121_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_010886166.1|3743376_3752850_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753475_3753922_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3753958_3754699_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3754993_3755281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755617_3766768_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767011_3767806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767887_3768259_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768156_3768375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768401_3768662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768776_3769166_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769179_3769473_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769469_3770315_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770438_3770714_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770710_3770968_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771009_3772200_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772316_3772685_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772681_3773233_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773239_3773821_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773801_3774170_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774147_3774540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774536_3777167_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777402_3777867_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778233_3780000_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780000_3780645_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780643_3781078_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781166_3784406_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784597_3785938_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3785979_3787155_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787208_3787313_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787391_3788033_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788033_3788282_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788286_3789714_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789821_3790475_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790513_3792019_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792023_3792914_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3792922_3794533_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794477_3794723_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794765_3796027_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
