The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	27282	78583	4102178	transposase,tRNA	Synechococcus_phage(25.0%)	49	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28313_28649_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28673_29108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29140_30358_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30363_30861_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31068_32004_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32213_33005_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33047_34469_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34624_35575_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35571_36762_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37011_37923_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37924_40063_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40059_40599_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41317_42211_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42686_43217_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43345_43645_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010930208.1|43662_44613_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45199_45748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45719_45956_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46083_46977_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48146_49394_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49390_50005_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_029443813.1|51132_52389_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53620_54355_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54360_54951_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54975_55665_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55661_56423_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56502_57402_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57495_58446_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59246_60473_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60472_60892_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61075_62017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62440_63415_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63471_64053_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64065_64368_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64486_65545_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65579_66851_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67480_68662_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69083_70034_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816713.1|70127_70442_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|71634_73542_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|73703_74324_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|74355_74937_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|75025_75277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|75278_76121_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|76226_77636_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|77632_78583_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	107425	175249	4102178	transposase,tRNA	Bacillus_phage(22.22%)	56	NA	NA
WP_010929626.1|107425_108376_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109275_110469_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110550_111180_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111241_111925_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111934_113617_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113904_114252_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114342_114660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114942_115959_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116034_116835_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116831_117707_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117717_119010_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119052_120093_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120198_121020_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121120_122071_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122168_123074_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123070_123904_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124740_125751_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125747_126137_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127030_128284_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128374_130075_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130501_131149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131147_132587_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|132697_132982_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|133009_133888_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135154_136105_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815155.1|136523_138032_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
WP_019247146.1|138778_142741_+	FAD/FMN-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929644.1|142793_143576_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929645.1|143663_144887_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929646.1|144870_145803_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA	NA
WP_003817676.1|145808_146621_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929647.1|147933_148905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815135.1|149023_149806_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929648.1|150572_151553_-	biotin-dependent carboxyltransferase	NA	NA	NA	NA	NA
WP_010929649.1|151549_152278_-	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_003815126.1|152302_152734_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929650.1|152835_153711_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853237.1|153762_154962_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.1e-91
WP_010929652.1|155066_155528_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_010929653.1|155633_157031_-	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_010929654.1|157027_157705_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
WP_010929655.1|157760_159071_-	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
WP_003815113.1|159082_159781_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
WP_003815111.1|159944_160721_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_010929656.1|160886_161909_+	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_023853232.1|162137_162773_+	SCP-2 sterol transfer family protein	NA	NA	NA	NA	NA
WP_023995348.1|162778_164332_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
WP_005015810.1|164890_165841_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167284_168187_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168164_168794_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169076_170507_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170540_171170_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171218_172826_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172850_173534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173615_174092_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174298_175249_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	178631	236267	4102178	protease,transposase,tRNA	Klosneuvirus(14.29%)	47	NA	NA
WP_010929666.1|178631_180710_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180959_181232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181333_182419_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182422_184327_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184323_187998_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188058_188622_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188629_189052_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189079_189499_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189527_189974_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190100_190598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190752_193023_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|193098_194304_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929673.1|195454_196090_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196086_196980_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197374_198475_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198556_198931_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198990_201855_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|201999_202740_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202809_204021_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204049_205018_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205631_206582_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206738_207062_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207166_208207_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|208212_208992_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209037_209334_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209359_209635_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209691_210336_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210335_211022_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|211220_212003_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212053_212779_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212810_214160_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214271_215204_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215661_218457_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|219050_221894_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222064_222784_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222822_223371_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223525_224425_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224449_225400_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818947.1|225618_226314_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|226330_227743_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|227855_229286_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|229327_231241_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|231559_232126_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|232216_233218_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_005012067.1|233332_234283_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234369_235320_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235316_236267_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	250681	303015	4102178	protease,transposase,tRNA	Bacillus_phage(25.0%)	45	NA	NA
WP_003814337.1|250681_251623_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251619_253509_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253595_254234_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254376_255762_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255692_256229_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256380_257772_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257788_258769_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258904_259888_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259952_260852_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260958_262713_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262720_263845_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263858_264839_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929712.1|267078_267624_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|267749_269327_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269342_270497_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270510_270636_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270632_272384_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272380_274060_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274122_274671_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275813_276092_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277135_278086_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|278362_278524_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_003815821.1|279190_279640_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279649_280261_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|280419_281268_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281293_282676_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282740_283382_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283521_283980_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284004_284781_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284834_285971_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285967_286918_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807705.1|287016_287643_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_003807706.1|287665_288592_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003819100.1|288600_290187_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929723.1|290183_291188_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003807710.1|291387_292248_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|292279_293281_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003819104.1|293351_294161_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003819105.1|294238_296098_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_010929725.1|296226_297429_-	MFS transporter	NA	NA	NA	NA	NA
WP_004566082.1|297542_298424_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004566083.1|299926_300487_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_005013747.1|300546_301497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|301688_301976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|302064_303015_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	390851	448360	4102178	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390851_391802_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391938_392856_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392852_393101_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393097_394303_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394375_395371_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395393_396614_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396610_397255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398985_399795_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400099_401053_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401151_402135_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402061_402763_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402811_403582_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403578_404757_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404924_406631_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406627_407524_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407564_409154_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409203_410196_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410264_410864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411324_412305_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412380_413331_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413419_414334_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414330_414990_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415079_416003_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416008_416464_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416460_417564_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417522_417792_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|417751_419371_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419367_420426_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420555_421050_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421142_422120_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422315_423521_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423517_425029_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425044_426358_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426548_426728_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427137_427872_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430316_431267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431398_431797_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432207_432678_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432766_433111_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433210_434611_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436399_436918_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437028_437784_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437979_439212_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439204_439990_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440056_441028_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441038_442016_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442141_443314_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443340_444369_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444434_445628_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447409_448360_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	589365	650555	4102178	protease,transposase	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|589365_590316_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|590791_591682_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|591678_592500_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|592698_593190_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|593208_594282_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|594328_595432_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|595507_596128_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|596148_596658_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|596712_596964_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|597027_598161_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|598168_598555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|598551_601071_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|601499_601838_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|601834_602341_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|602402_603203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|603313_604255_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|604348_605884_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|607563_609414_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|609417_610251_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|610250_611192_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|611443_612415_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|612556_614845_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|615151_616060_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|616114_617080_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|617154_618816_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|618887_619598_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|619746_620697_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|621395_621779_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|621836_622439_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|622456_622858_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|622973_623885_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|623881_624463_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|625257_625992_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|626032_627082_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|627229_627808_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|628194_629172_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|629265_633660_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|633860_634709_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|634867_635680_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|635735_636686_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|636784_637585_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|637646_638030_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|638041_639394_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|639681_640011_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|640013_640763_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|640945_641866_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|641912_642125_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|642147_642570_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|642586_643687_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|643783_645301_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|645376_646216_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|646237_647110_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|647200_648295_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|648588_649539_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|649613_650555_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	655879	702070	4102178	terminase,tail,transposase,tRNA	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|655879_656905_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|656945_657185_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|657254_658844_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|658843_659392_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|659472_660045_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|660063_660975_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|661048_662017_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|662139_663213_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|663217_665038_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|665114_666065_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|666153_666489_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|666622_667273_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|667294_668713_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|668782_669538_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|669506_670265_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|670275_671157_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|671173_671881_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|671883_672642_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|672851_674594_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|674586_675111_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|675150_675945_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|676112_677186_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|677284_678235_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|678486_678693_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|678764_679376_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|679930_680182_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|680174_680864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|681120_682071_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|682710_683196_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|683182_684460_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|684462_685881_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|685909_686965_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|686970_687213_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|687335_687938_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|688366_689317_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|689991_690243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|690305_690788_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|690801_690990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|690989_691385_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|691381_691780_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|691776_692199_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|692206_692707_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|692961_693480_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|693489_693819_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|693836_694127_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|694152_696765_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|696774_697134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|697201_697735_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|697731_698121_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|698113_702070_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	708236	762166	4102178	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|708236_709967_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|710019_710448_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|710450_711131_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|711130_711589_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|711625_712600_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|712616_713933_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|713964_714462_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|714548_715238_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|715237_716287_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|716283_717078_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|717246_717597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|717572_718130_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|719259_720210_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|722347_723577_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|723579_725022_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|725126_726272_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|726303_727101_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|727125_728685_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|728681_731054_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|731163_732267_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|732266_732959_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|733102_733804_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|733788_734166_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|734897_735848_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|736007_736880_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|737220_737439_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|737478_738858_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|738899_740297_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|740336_741989_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|741992_742877_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|742876_743818_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|743896_745516_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|745682_746498_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|746565_747135_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|747135_748086_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|748740_749838_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|749871_751137_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|751294_752245_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|752488_753079_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|753094_755539_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|755658_756630_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|756761_757286_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|757245_758196_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|758417_760613_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|760685_761093_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|761215_762166_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	884755	952731	4102178	transposase	Bacillus_phage(33.33%)	56	NA	NA
WP_023994644.1|884755_885772_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|885968_886952_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|888550_889939_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|889969_890959_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|891069_892302_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|892583_893384_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|893406_895638_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|896425_896872_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|896893_897640_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|897783_898761_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|899394_900006_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|899999_901217_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|901357_902308_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|902304_903024_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|903144_905304_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|905394_905664_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|905752_905959_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|905957_906485_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|906503_907283_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|907450_908467_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|908539_909031_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|909041_910757_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|911920_912871_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|912867_914700_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|915098_915758_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|916285_916966_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|917247_917964_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|917978_919280_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|921424_924313_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|924536_925889_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|925917_926439_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|926435_927890_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|927924_928173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|928278_929154_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|929179_930235_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|930247_931039_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|931071_932442_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|933618_934569_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|934621_934843_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|935002_935215_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|935334_936453_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|936549_936765_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|936958_937210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|937322_938273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|938269_938653_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|938707_940522_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|940671_941499_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|941544_942525_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|942521_942734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|942730_943912_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|944075_944810_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|944811_947424_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|947559_949473_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|950088_950499_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|950596_951682_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|951780_952731_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	996265	1068781	4102178	transposase,tRNA	Enterococcus_phage(14.29%)	60	NA	NA
WP_005012067.1|996265_997216_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|997320_998370_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|998507_999524_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1001032_1001605_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1001664_1002396_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1002447_1003365_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1004172_1007352_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1007348_1008731_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1008800_1009052_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1009197_1009812_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1009998_1012059_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1012188_1013040_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1013036_1013663_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1013659_1015414_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1015706_1018412_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1018424_1020086_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1020098_1021889_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1022110_1023286_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1023328_1024279_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1024377_1025118_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1025312_1027349_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1027366_1028377_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1028494_1029688_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1029717_1030491_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1030487_1031678_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1031703_1032642_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1032638_1034987_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1035141_1035783_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023994624.1|1037112_1037265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1037296_1037845_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1037863_1038349_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1038526_1039465_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1039467_1039785_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1039830_1040775_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1042455_1043106_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1043159_1043495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1043491_1044352_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1044368_1044650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1044723_1044987_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1045230_1046181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1046479_1047217_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1047652_1047976_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1048010_1048571_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1048690_1049566_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1049578_1050526_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1050627_1050921_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1050947_1053005_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1053019_1053520_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1053593_1055300_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1056163_1057216_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1057268_1057658_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1057666_1058299_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1058398_1059415_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1060245_1061253_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1061249_1062893_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1062889_1063777_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1063917_1064391_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1064380_1065403_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1065399_1066827_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1067764_1068781_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	1072534	1152927	4102178	holin,transposase,tRNA	Planktothrix_phage(16.67%)	59	NA	NA
WP_010930155.1|1072534_1073671_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1073667_1074741_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1074898_1076335_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1076425_1077067_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1077402_1078419_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1081565_1082987_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1083250_1083967_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1084051_1084369_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1084409_1084823_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1084824_1085184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1085226_1086771_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1086854_1087685_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1087719_1088874_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1088916_1089789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1089905_1092194_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1093400_1093865_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1093891_1094842_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1095209_1095986_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1096030_1096888_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1096909_1097926_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1098060_1099101_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1099295_1101377_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1101612_1103106_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1103336_1104131_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1104351_1105710_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1105706_1106549_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1106567_1108454_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1108395_1108647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1108691_1109324_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1109342_1109945_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_161633091.1|1111626_1112334_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1112692_1113679_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1113818_1114832_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1114828_1115779_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1115891_1116350_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1116386_1117700_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1117717_1118089_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1118085_1119549_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1119689_1120418_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1120399_1123249_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1123461_1124412_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1124579_1125404_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1125403_1126282_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1127186_1128302_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1128330_1129125_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1129121_1130987_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1131065_1131698_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1131694_1131997_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1132039_1133560_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1133566_1134322_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1134351_1135456_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1135558_1137259_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1137240_1138218_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1138227_1139508_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1139500_1140196_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1140229_1141057_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1141338_1144569_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930196.1|1145304_1149231_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1151130_1152927_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	1315848	1384334	4102178	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1315848_1316799_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1317567_1318206_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1319095_1319542_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1319623_1320325_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1320325_1321093_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1321089_1322328_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1322327_1323254_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1323356_1324472_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1324487_1325438_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1325791_1326373_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1326369_1327203_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1327413_1328727_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1328903_1329785_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1329804_1330656_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1330708_1331797_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1331907_1333035_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1333269_1333881_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_005012808.1|1333979_1334930_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1335151_1335529_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1335676_1336174_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1336170_1336698_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1336831_1337647_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1337659_1338841_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1338888_1339782_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1339908_1340379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1340504_1341332_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1341360_1342137_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1342133_1342409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1342423_1342888_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1342899_1343601_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1343710_1344211_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1344293_1345472_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1347099_1347435_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1347622_1349071_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1349128_1349473_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1349579_1350119_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1350211_1351162_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852768.1|1351260_1351668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1351900_1352332_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1352513_1352918_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1354154_1354478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1354480_1355368_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1355400_1355826_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1355897_1356251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1356490_1356997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1357035_1358367_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1358426_1359242_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1359238_1360093_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1363155_1365699_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1367065_1368820_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1368816_1370937_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1370941_1373137_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1373133_1376475_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1379276_1380227_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1380292_1380472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1380588_1381344_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1381330_1382476_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1383383_1384334_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	1444825	1500313	4102178	protease,transposase	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1444825_1445776_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1446977_1447424_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1447416_1448892_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1448888_1449644_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1449636_1450647_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1450636_1452313_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1452625_1452958_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1452971_1453367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1453376_1453703_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1453699_1454026_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023994685.1|1453952_1454975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930343.1|1454971_1455322_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1455369_1455798_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1455805_1457179_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1457319_1457697_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1457959_1459267_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1459327_1460158_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1460154_1460643_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1460684_1462205_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1462248_1462725_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1463528_1466126_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1466155_1466977_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1467703_1468453_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_010926570.1|1468636_1469515_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1469612_1470329_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1470343_1470904_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010930350.1|1471070_1471835_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	1.7e-18
WP_010930351.1|1471854_1472712_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1472708_1473908_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1473947_1475282_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1475334_1477671_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1477796_1478360_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1478368_1479460_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1479531_1479987_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1479987_1480782_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1480778_1481960_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1481946_1482552_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1482548_1483322_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1483333_1484161_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1484322_1486686_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1486753_1487473_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1487596_1488022_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1488056_1489007_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1489124_1490051_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1490116_1491274_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1491254_1491722_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1491869_1492820_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1492836_1493271_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1493260_1493611_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1493807_1494962_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1494958_1496131_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1496178_1497072_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1497117_1497555_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1497614_1498304_+	VIT family protein	NA	NA	NA	NA	NA
WP_010929577.1|1498313_1499264_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1499362_1500313_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	1595010	1663095	4102178	transposase,tRNA	Streptococcus_virus(11.11%)	57	NA	NA
WP_010930416.1|1595010_1595499_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1595616_1596195_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1596300_1596669_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1596767_1597718_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1597724_1598837_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1599523_1600726_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1600929_1603590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1603602_1607007_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1607674_1609900_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1609946_1610273_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1610323_1610932_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1611030_1611981_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1612050_1612815_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1612811_1613348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1613514_1614366_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1614425_1615052_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1615048_1615999_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1616097_1617210_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1617199_1618201_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1618306_1619818_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1619814_1621119_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1621230_1621791_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1622058_1622613_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1623068_1623284_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1623538_1626136_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1626132_1627320_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1627977_1628592_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1628680_1629802_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1629819_1630725_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1631617_1632568_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1632749_1633502_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1633570_1634230_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1634226_1634955_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1634967_1637247_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1637271_1637475_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1637516_1638149_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1638284_1639202_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1639198_1639912_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1640149_1640920_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1640924_1641524_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1641768_1643259_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1643317_1643602_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1644167_1645094_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1645230_1645971_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1646137_1647514_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1647695_1648601_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1650252_1652055_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1652172_1652823_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1652921_1653872_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1653893_1655114_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1655299_1656712_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1656775_1657843_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1657842_1659330_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1659339_1660284_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1660443_1661142_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1661219_1662125_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1662144_1663095_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	1699044	1762881	4102178	transposase	Brazilian_cedratvirus(25.0%)	53	NA	NA
WP_005013747.1|1699044_1699995_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1700053_1700827_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1700819_1702376_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1702372_1703323_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1704649_1705252_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1705491_1706193_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1706186_1706969_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1707153_1708104_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1708202_1708940_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1709129_1709888_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1709934_1710924_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1711101_1712070_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1713609_1714578_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1714586_1715528_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1716001_1717012_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1717002_1718517_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1718513_1719860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1719862_1720897_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1720946_1722572_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1723124_1724075_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1724179_1725127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1725180_1726995_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1726987_1727662_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1727791_1730866_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1730879_1731179_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1731493_1732117_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1732360_1733230_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1733207_1734152_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1734237_1735164_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1735276_1736056_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1736046_1737243_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1737273_1738224_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1738445_1739135_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1739199_1739955_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1740006_1740999_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1741008_1741962_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1742077_1743040_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1744441_1744870_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1744866_1745817_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1746110_1746833_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1747271_1748459_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1748462_1748813_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1750562_1751534_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1751547_1752261_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1752265_1753183_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1753289_1753586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930509.1|1755792_1758726_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_003810969.1|1758725_1759070_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_004568496.1|1759066_1760695_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_010930510.1|1760691_1761171_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_033446177.1|1761170_1761452_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930511.1|1761448_1761775_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_005013747.1|1761930_1762881_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	1987395	2057047	4102178	transposase,tRNA	Staphylococcus_phage(16.67%)	55	NA	NA
WP_003818515.1|1987395_1990053_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1990130_1991333_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1991329_1991842_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247822.1|1991964_1992402_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1992678_1993629_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1993727_1994678_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853105.1|1994841_1996737_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_010930711.1|1996850_1997018_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1997081_1997318_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_033446265.1|1997686_1998838_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|2000401_2001352_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|2001803_2002805_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|2002977_2003835_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|2003831_2005094_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|2005194_2005569_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010930713.1|2005641_2006829_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|2006913_2007684_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|2007797_2008562_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930716.1|2008512_2009814_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|2009810_2010617_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|2012361_2013333_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|2013489_2014002_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|2014160_2015135_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|2016135_2016930_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|2016955_2017762_-	TOBE domain-containing protein	NA	NA	NA	NA	NA
WP_003810329.1|2017872_2018463_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|2018473_2019652_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|2019754_2020129_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|2020381_2021713_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|2021779_2025010_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|2026500_2027247_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|2027331_2027793_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|2027830_2028889_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|2028851_2030681_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|2030720_2031293_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930727.1|2032717_2033539_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	4.1e-42
WP_010930728.1|2033857_2035180_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|2035539_2036175_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|2036134_2037085_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2037955_2038828_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2038905_2040045_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2040403_2041660_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2041665_2042193_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2042197_2043016_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2043015_2043738_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2043759_2044074_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2044091_2045240_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2045270_2046146_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2046142_2047462_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2047534_2048731_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2048741_2050229_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2052823_2053723_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2053860_2054826_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2054924_2055875_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2056096_2057047_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	2068543	2117939	4102178	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2068543_2069494_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2070631_2070928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2071102_2072455_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2072597_2073614_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2075593_2076607_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2076693_2077599_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2077755_2078100_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2078257_2078716_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2078729_2080946_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2080942_2082004_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2082032_2083007_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2082958_2083777_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2083789_2084398_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2084572_2084968_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2084986_2086426_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2086454_2086802_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2086820_2087771_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2088423_2089374_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2089457_2091275_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2091348_2091996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2092008_2092938_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2093107_2093572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2093819_2094500_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2094548_2096240_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2096255_2096807_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2096803_2097175_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2097287_2098124_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2098134_2098659_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2098756_2098936_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_010930763.1|2099065_2100040_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2100170_2100527_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2100516_2101392_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2101490_2102375_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2102396_2103692_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2104640_2105291_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|2105378_2106899_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2107156_2109022_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2110067_2111018_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2111035_2111176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2111990_2112350_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2112337_2113774_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2113770_2114424_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2114420_2115614_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2115717_2116992_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2116988_2117939_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	2129143	2197519	4102178	protease,transposase,tRNA	Klosneuvirus(22.22%)	59	NA	NA
WP_005013747.1|2129143_2130094_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2130053_2130467_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2130751_2131051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2131460_2133743_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2134208_2134403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2134428_2136459_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2136478_2136691_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2136968_2137508_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2137621_2138917_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2138993_2140151_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2140334_2141234_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2141252_2142557_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2142522_2143629_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2143716_2143953_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2144091_2145162_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2145165_2146521_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_023852925.1|2146547_2147705_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2147710_2148349_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033446258.1|2148350_2149646_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_033446257.1|2149695_2150982_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2150997_2151504_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2151500_2152649_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2152676_2153102_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2153424_2156307_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2156399_2157155_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2157920_2159270_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2159368_2160319_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2160417_2161368_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2161441_2161915_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2161940_2163149_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2163145_2163919_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2163918_2164542_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2164707_2164968_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2165271_2165853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2165919_2166174_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2166160_2168785_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_010930589.1|2168856_2169675_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810661.1|2169671_2170277_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930588.1|2170314_2171448_-	general secretion pathway protein	NA	NA	NA	NA	NA
WP_010930587.1|2173163_2173538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930586.1|2173635_2174910_-	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930585.1|2174913_2176491_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930584.1|2177397_2178753_-	amidase	NA	NA	NA	NA	NA
WP_010930583.1|2178749_2180384_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930582.1|2180376_2181207_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003810637.1|2181224_2182169_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930581.1|2182221_2183796_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247553.1|2183843_2184203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247554.1|2184195_2184516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247555.1|2184631_2185564_+	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_003818676.1|2185666_2186623_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810623.1|2186772_2188110_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010930578.1|2188114_2189371_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930577.1|2189566_2190613_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_003818672.1|2190670_2191039_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930576.1|2191169_2192042_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818670.1|2192118_2193021_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930574.1|2194077_2195295_-	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_010929577.1|2196568_2197519_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	2212797	2277618	4102178	protease,transposase,tRNA	Lake_Baikal_phage(18.18%)	54	NA	NA
WP_005012067.1|2212797_2213748_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2214318_2214531_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2214548_2215280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2215314_2215956_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2215948_2216617_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2218829_2219606_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2219627_2220785_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2220781_2221213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930562.1|2221209_2222007_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2222026_2222428_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2222494_2223466_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2223531_2224755_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2224982_2225933_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2226056_2228510_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2228698_2230003_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2230107_2230761_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2230763_2232074_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|2232252_2232831_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2232942_2233143_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2233488_2234055_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2234138_2234342_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2234648_2234969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2235010_2235292_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2235366_2236623_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2237005_2237335_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2238905_2239727_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2239726_2240866_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2240872_2241769_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_033446179.1|2241783_2243691_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2244050_2246663_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2246715_2249016_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2249012_2250221_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|2250482_2250857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2250853_2251804_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2251902_2253897_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2253956_2254922_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2254911_2257773_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2257775_2258282_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2258386_2259595_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2259596_2260535_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2260696_2261170_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2261166_2262117_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2262227_2262668_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2262796_2264026_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2264064_2264886_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2264939_2266091_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2266182_2266671_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2269221_2271771_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2271841_2274415_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2274680_2274881_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2274912_2275074_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2275131_2275470_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2275618_2276569_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2276667_2277618_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	2348294	2411872	4102178	protease,transposase	uncultured_Caudovirales_phage(11.11%)	48	NA	NA
WP_010931070.1|2348294_2349245_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809615.1|2349546_2350023_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_019247142.1|2350646_2352284_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809610.1|2352314_2353628_-	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_004568205.1|2353761_2354079_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852827.1|2354179_2355502_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|2355498_2356449_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2356547_2357498_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930836.1|2358027_2359050_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820286.1|2359078_2359909_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_029443740.1|2359925_2361623_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930838.1|2361687_2362764_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_010930839.1|2362923_2363787_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930840.1|2363817_2364387_+	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930841.1|2364403_2365255_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003813142.1|2366312_2367194_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930842.1|2367268_2368258_-	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930843.1|2368320_2369271_-	DMT family transporter	NA	NA	NA	NA	NA
WP_003813147.1|2369333_2370191_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003813149.1|2370250_2370739_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930844.1|2372311_2373502_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930845.1|2373498_2375085_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930846.1|2375103_2376171_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930847.1|2376275_2377820_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930848.1|2378239_2379814_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023997180.1|2379930_2380938_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003813165.1|2380934_2381774_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930850.1|2381778_2383416_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_005013747.1|2383412_2384363_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930851.1|2384505_2385780_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_010930852.1|2385809_2386100_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_047122810.1|2386172_2387186_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930854.1|2387205_2388468_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_010930855.1|2388470_2389394_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930856.1|2389390_2390884_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930857.1|2390894_2391827_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_076879554.1|2392008_2393334_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930859.1|2393368_2394724_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_023853666.1|2394784_2396305_-	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930861.1|2396459_2397191_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023853662.1|2397288_2398599_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930863.1|2398614_2399526_+	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_010930864.1|2399516_2400110_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_003813196.1|2400171_2400558_+	ribosome silencing factor	NA	NA	NA	NA	NA
WP_003813199.1|2400569_2401040_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_010930865.1|2401051_2401675_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_010930866.1|2401695_2404443_-	autotransporter Vag8	NA	NA	NA	NA	NA
WP_005012808.1|2410921_2411872_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	2683857	2724523	4102178	transposase,tRNA	Salmonella_phage(33.33%)	43	NA	NA
WP_010929591.1|2683857_2684808_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2684918_2685101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2685200_2685797_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2685980_2687072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2687571_2687982_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852697.1|2688040_2688370_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
WP_010931007.1|2688387_2690805_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2690817_2691840_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2691914_2692274_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2692289_2692487_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2692822_2693773_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2693966_2694416_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2694412_2695363_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2695473_2696922_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2697036_2697282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2697421_2698372_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2698616_2699330_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2699452_2699680_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2699974_2700613_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2700721_2701756_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2701752_2702703_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2703117_2703642_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2703645_2703915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2704113_2705175_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2705258_2706893_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2706894_2707698_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2707726_2708686_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2708689_2710204_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2710240_2711245_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_033456131.1|2711252_2711486_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931018.1|2711675_2712146_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2712181_2712793_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2712823_2713447_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2713527_2715060_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2715094_2716312_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2716379_2717411_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2717407_2718577_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2718570_2719251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2719412_2720255_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2720417_2721389_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2721560_2722439_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2722461_2723532_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2723572_2724523_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	2779988	2922808	4102178	protease,transposase,tRNA	Agrobacterium_phage(14.29%)	107	NA	NA
WP_003810909.1|2779988_2780405_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2780515_2781148_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2781176_2781620_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2781641_2782733_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2782787_2783588_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2783723_2784344_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2784483_2784957_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2786096_2787047_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2787043_2794705_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2794945_2798992_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2799304_2799886_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2799882_2801181_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2801260_2802289_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2802549_2803500_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2803496_2804447_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2804763_2805369_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2805422_2806736_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2806810_2807281_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2807280_2808069_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2808079_2809732_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010931075.1|2811930_2812437_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2812433_2813198_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2813213_2813498_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2813562_2814552_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2814723_2815653_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2815624_2816311_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2816344_2816890_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2816934_2818200_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2818196_2819099_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2820280_2821225_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2821319_2822837_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2822878_2824507_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2824614_2825496_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2828608_2828983_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2829007_2829346_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2829389_2831024_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2831062_2832409_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2832516_2833938_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2834007_2834592_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2834694_2835645_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2835778_2836885_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2836895_2837993_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2838137_2839343_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2839349_2839871_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2839867_2840350_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2840355_2840607_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2840587_2841073_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2841208_2844670_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2844687_2845572_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2845581_2846013_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2846259_2846763_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2846840_2848241_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2848315_2849191_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2849187_2850195_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2850662_2850968_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2851058_2851649_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2851839_2852856_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2853047_2855384_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2855466_2855901_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_076879566.1|2855999_2856950_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2857048_2857999_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2857995_2858790_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2858821_2859526_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2859600_2860401_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2860397_2860805_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2860801_2861443_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2861435_2863436_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2864696_2866028_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2866024_2866975_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2868681_2868948_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2869655_2869994_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2874546_2875149_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2875245_2876535_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2876592_2877324_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2877320_2878124_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2878120_2879209_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2879205_2880135_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2880283_2881429_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931110.1|2882730_2886552_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2886708_2887377_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2887381_2889055_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2889073_2890393_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2890397_2892713_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2892768_2894937_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2894933_2900114_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2900212_2900527_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2900754_2901000_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2901094_2901613_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2901712_2902918_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2903033_2904431_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2904547_2905126_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2905198_2906590_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2906757_2907708_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2907988_2908609_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2908605_2909019_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2909015_2910059_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2910114_2910303_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2910312_2911077_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2911167_2911824_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2911915_2912674_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2912699_2914301_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2914501_2915506_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2915606_2915870_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2915987_2916764_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2917354_2918305_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2920688_2921801_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010929584.1|2921857_2922808_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	2953194	2996885	4102178	transposase	Planktothrix_phage(33.33%)	39	NA	NA
WP_005012067.1|2953194_2954145_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2954265_2955162_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2957439_2959665_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2959829_2960918_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2960874_2961528_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2961575_2962373_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2962904_2963855_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2963935_2965084_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2965140_2966091_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2966189_2966495_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2966523_2966958_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2966959_2968204_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2968200_2968911_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2968925_2969837_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2970199_2970604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2970600_2971059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2971065_2971974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2971970_2972837_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2972823_2973651_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2973661_2974789_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2975866_2977105_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2977146_2978409_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2978415_2979168_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2979219_2979405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2979680_2980145_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2980176_2980836_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2980980_2983089_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2983085_2984036_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2984139_2984760_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2984863_2985604_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2986738_2987863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2987908_2988277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2988518_2989469_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2990504_2991047_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|2991432_2992383_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931157.1|2992379_2993288_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2993414_2994251_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|2994763_2995873_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2995934_2996885_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	3396690	3441762	4102178	transposase,tRNA	Staphylococcus_phage(20.0%)	37	NA	NA
WP_005012067.1|3396690_3397641_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3398407_3399502_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3399494_3400829_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3400782_3401466_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3401491_3402655_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3402651_3403653_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3403652_3404525_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3404521_3405271_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3405267_3406059_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3406055_3407195_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3407470_3408256_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3408289_3409072_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3409075_3409465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3410604_3411468_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3411503_3412592_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3412588_3413539_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247959.1|3413892_3416871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3417797_3418676_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3420624_3421575_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3421571_3422039_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3422081_3422852_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3422872_3423673_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3423683_3425093_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3425187_3425973_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3426212_3427229_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3427336_3427729_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3427866_3428547_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3428551_3429523_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3429618_3430569_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814239.1|3432073_3432775_+	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010927010.1|3432774_3434199_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_010931361.1|3435268_3436609_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003820957.1|3436724_3438488_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3438599_3439478_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3439590_3440406_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3440409_3440661_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3440745_3441762_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	3459506	3511913	4102178	transposase,tRNA	Acinetobacter_phage(37.5%)	47	NA	NA
WP_010931363.1|3459506_3460523_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3460618_3461329_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3461325_3462315_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3462410_3464042_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3464044_3464782_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3464937_3465810_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3466159_3467299_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3467295_3467955_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3468026_3468659_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3468688_3469207_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3469217_3470327_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3470373_3471228_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3471229_3472132_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3473354_3474305_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3476061_3477051_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3477226_3478015_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3478011_3479043_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3479061_3479625_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3479680_3481201_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3481464_3482169_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3482176_3482905_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3483019_3483394_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3483436_3484726_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3484722_3485892_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3485888_3486728_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3486787_3487723_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3487735_3488686_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3488784_3489747_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3489778_3490138_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3490262_3491165_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3491166_3492939_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3492973_3493750_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3495073_3496024_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815365.1|3496875_3497196_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003815364.1|3497268_3498150_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815363.1|3498266_3498509_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_010931385.1|3498646_3499117_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815348.1|3499129_3499669_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931386.1|3499703_3501245_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003817813.1|3501343_3502249_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931387.1|3502291_3503692_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003815341.1|3503701_3504124_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931388.1|3504306_3505191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931389.1|3505266_3506343_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_019247688.1|3506649_3508752_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931391.1|3508794_3510864_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_005012808.1|3510962_3511913_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP017168	Bordetella pertussis strain J310 chromosome, complete genome	4102178	3529031	3582832	4102178	transposase,tRNA	Catovirus(11.11%)	46	NA	NA
WP_010931400.1|3529031_3529982_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3530322_3531273_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3531371_3532322_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3532618_3533116_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3533158_3534934_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3534941_3535808_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3535814_3536549_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3537718_3538513_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3538802_3539393_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3539426_3540755_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3540829_3541975_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3542086_3543085_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3543047_3543482_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3544998_3545883_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3545879_3547085_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3547081_3547942_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3548054_3549845_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3549885_3550530_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3550551_3550860_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3551025_3552312_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3553745_3554696_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3556647_3557862_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3557967_3558957_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3558953_3559562_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3559574_3560204_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3560200_3560821_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3560852_3561644_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3562495_3562951_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3562969_3563896_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3563949_3565236_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3566166_3567039_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3567035_3567986_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3568084_3569035_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699695.1|3569139_3569370_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247263.1|3569496_3569886_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010929962.1|3569902_3572284_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_023853194.1|3572276_3573653_-	FAD binding domain in molybdopterin dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929960.1|3573668_3574664_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003819054.1|3574682_3575675_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807624.1|3575915_3576476_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|3576480_3576807_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_010929958.1|3576843_3577656_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003807618.1|3577666_3578749_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929957.1|3578835_3580110_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3580832_3581783_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3581881_3582832_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
