The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	21943	79632	4111636	transposase,tRNA	Synechococcus_phage(25.0%)	52	NA	NA
WP_077069004.1|21943_22894_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_127013036.1|22911_23100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929576.1|25401_26508_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|27519_28335_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930363.1|28331_29282_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|29363_29699_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|29723_30158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|30190_31408_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|31413_31911_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|32118_33054_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|33263_34055_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|34097_35519_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814398.1|36620_37811_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|38060_38972_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|38973_41112_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|41108_41648_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|41651_42380_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|42366_43260_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|43330_43726_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|43735_44266_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|44394_44694_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|44711_45662_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|46248_46797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|46768_47005_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|47132_48026_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|49195_50443_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|50439_51054_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|51189_52140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|52182_53439_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|54670_55405_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|55410_56001_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|56025_56715_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|56711_57473_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|57552_58452_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|58545_59496_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|60296_61523_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|61522_61942_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|62125_63067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|63490_64465_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|64521_65103_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|65115_65418_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|65536_66595_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|66629_67901_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|68530_69712_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003816713.1|71176_71491_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|72683_74591_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|74752_75373_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|75404_75986_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|76074_76326_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|76327_77170_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|77275_78685_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|78681_79632_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	108474	176300	4111636	transposase,tRNA	Bacillus_phage(22.22%)	56	NA	NA
WP_010929626.1|108474_109425_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|110324_111518_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|111599_112229_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|112290_112974_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|112983_114666_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|114953_115301_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|115391_115709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|115991_117008_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|117083_117884_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|117880_118756_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|118766_120059_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|120101_121142_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|121247_122069_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|122169_123120_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|123218_124124_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|124120_124954_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|125790_126801_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|126797_127187_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|128080_129334_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|129424_131125_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|131551_132199_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|132197_133637_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|133747_134032_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|134059_134938_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|136204_137155_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815155.1|137573_139082_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
WP_019247146.1|139828_143791_+	FAD/FMN-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929644.1|143843_144626_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929645.1|144713_145937_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929646.1|145920_146853_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA	NA
WP_003817676.1|146858_147671_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929647.1|148985_149957_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815135.1|150075_150858_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929648.1|151624_152605_-	biotin-dependent carboxyltransferase	NA	NA	NA	NA	NA
WP_010929649.1|152601_153330_-	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_003815126.1|153354_153786_-	VOC family protein	NA	NA	NA	NA	NA
WP_010929650.1|153887_154763_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853237.1|154814_156014_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.1e-91
WP_010929652.1|156117_156579_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_010929653.1|156684_158082_-	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_010929654.1|158078_158756_-	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
WP_010929655.1|158811_160122_-	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
WP_003815113.1|160133_160832_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
WP_003815111.1|160995_161772_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_010929656.1|161937_162960_+	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_023853232.1|163188_163824_+	SCP-2 sterol transfer family protein	NA	NA	NA	NA	NA
WP_023995348.1|163829_165383_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
WP_005015810.1|165941_166892_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168335_169238_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169215_169845_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|170127_171558_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|171591_172221_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172269_173877_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173901_174585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174666_175143_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|175349_176300_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	179682	237319	4111636	tRNA,transposase,protease	Klosneuvirus(14.29%)	48	NA	NA
WP_010929666.1|179682_181761_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|182010_182283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|182384_183470_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183473_185378_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|185374_189049_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189109_189673_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189680_190103_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|190130_190550_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|190578_191025_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|191151_191649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191803_194074_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|194149_195355_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|195453_196404_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|196506_197142_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|197138_198032_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|198426_199527_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|199608_199983_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|200042_202907_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|203051_203792_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|203861_205073_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|205101_206070_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|206683_207634_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|207790_208114_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|208218_209259_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|209264_210044_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|210089_210386_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|210411_210687_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|210743_211388_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|211387_212074_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|212272_213055_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|213105_213831_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|213862_215212_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|215323_216256_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|216713_219509_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|220102_222946_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|223116_223836_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|223874_224423_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|224577_225477_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|225501_226452_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818947.1|226670_227366_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|227382_228795_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|228907_230338_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|230379_232293_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|232611_233178_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|233268_234270_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010929969.1|234384_235335_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|235421_236372_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|236368_237319_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	251733	319651	4111636	tRNA,transposase	Bacillus_phage(22.22%)	57	NA	NA
WP_003814337.1|251733_252675_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|252671_254561_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|254647_255286_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|255428_256814_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|256744_257281_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|257432_258824_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|258840_259821_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|259956_260940_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|261004_261904_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|262010_263765_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|263772_264897_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|264910_265891_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|266621_267572_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|268131_268677_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|268802_270380_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|270395_271550_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|271563_271689_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|271685_273437_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|273433_275113_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|275175_275724_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|276866_277145_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_010929577.1|279235_280186_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|282630_283365_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|283774_283954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|284144_285458_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|285473_286985_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|286981_288187_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|288382_289360_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446199.1|289452_289947_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003814720.1|290076_291135_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_010927086.1|291131_292751_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_157734656.1|292710_292980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929784.1|292938_294042_+	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_010929783.1|294038_294494_+	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_003814709.1|294499_295423_-	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929782.1|295512_296172_-	LysE family translocator	NA	NA	NA	NA	NA
WP_047122777.1|296168_297083_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929577.1|297171_298122_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486055.1|298197_299178_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|299638_300238_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807867.1|300306_301299_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486054.1|301348_302938_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_014486053.1|302978_303875_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486052.1|303871_305578_+	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_019247259.1|305745_306924_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486051.1|306920_307691_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_014486050.1|307739_308441_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486049.1|308367_309351_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486048.1|309449_310403_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_019248476.1|310707_311517_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486047.1|313247_313892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486046.1|313888_315109_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|315131_316127_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815840.1|316199_317405_-	CoA transferase	NA	NA	NA	NA	NA
WP_003815842.1|317401_317650_-	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_010927231.1|317646_318564_-	reductase	NA	NA	NA	NA	NA
WP_005012067.1|318700_319651_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	379173	431312	4111636	transposase,protease	Paramecium_bursaria_Chlorella_virus(14.29%)	50	NA	NA
WP_005013747.1|379173_380124_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814960.1|380246_380975_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_010929739.1|381071_382250_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|382246_383080_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|383116_383857_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|383976_385152_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|385148_386102_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|386115_386517_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_010927118.1|386509_387115_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|387202_387367_-	rubredoxin	NA	NA	NA	NA	NA
WP_010929734.1|387483_388332_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003814984.1|388328_388982_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|388998_390282_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|390521_392147_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|392240_392642_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|392666_393101_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|393102_394752_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|394792_395962_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929730.1|395964_396828_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|400191_400896_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|400889_401684_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|401680_402646_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|402649_403570_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|403666_404830_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|405052_405943_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|405946_406450_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|406492_407491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|407487_408438_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|408526_408814_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|409005_409956_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|410015_410576_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|412078_412960_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|413073_414276_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|414404_416264_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|416341_417151_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|417221_418223_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|418254_419115_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|419314_420319_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|420315_421902_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|421910_422837_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|422859_423486_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|423584_424535_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|424531_425668_-|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|425721_426498_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|426522_426981_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|427120_427762_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|427826_429209_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_010929720.1|429234_430083_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|430241_430853_+	stringent starvation protein A	NA	NA	NA	NA	NA
WP_003815821.1|430862_431312_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
>prophage 6
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	592514	653706	4111636	transposase,protease	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|592514_593465_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|593940_594831_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|594827_595649_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|595849_596341_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|596359_597433_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|597479_598583_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|598658_599279_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|599299_599809_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|599863_600115_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|600178_601312_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|601319_601706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|601702_604222_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|604650_604989_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|604985_605492_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|605553_606354_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|606464_607406_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|607499_609035_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|610714_612565_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|612568_613402_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|613401_614343_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|614594_615566_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|615707_617996_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|618302_619211_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|619265_620231_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|620305_621967_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|622038_622749_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|622715_622880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|622897_623848_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|624546_624930_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|624987_625590_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|625607_626009_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|626124_627036_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|627032_627614_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|628408_629143_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|629183_630233_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|630380_630959_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|631345_632323_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|632416_636811_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|637011_637860_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|638018_638831_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|638886_639837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|639935_640736_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|640797_641181_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|641192_642545_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|642832_643162_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|643164_643914_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|644096_645017_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|645063_645276_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|645298_645721_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|645737_646838_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|646934_648452_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|648527_649367_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|649388_650261_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|650351_651446_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|651739_652690_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|652764_653706_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	659030	705220	4111636	terminase,tail,tRNA,transposase	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|659030_660056_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|660096_660336_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|660405_661995_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|661994_662543_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|662623_663196_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|663214_664126_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|664199_665168_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|665290_666364_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|666368_668189_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_033446132.1|669303_669639_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|669772_670423_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|670444_671863_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|671932_672688_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|672656_673415_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|673425_674307_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|674323_675031_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|675033_675792_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|676001_677744_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|677736_678261_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|678300_679095_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|679262_680336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|680434_681385_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|681636_681843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|681914_682526_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|683080_683332_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|683324_684014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853183.1|684031_684253_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|684270_685221_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|685860_686346_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|686332_687610_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|687612_689031_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|689059_690115_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|690120_690363_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|690485_691088_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|691516_692467_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|693141_693393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|693455_693938_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|693951_694140_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|694139_694535_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|694531_694930_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|694926_695349_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|695356_695857_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|696111_696630_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|696639_696969_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|696986_697277_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|697302_699915_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|699924_700284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|700351_700885_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|700881_701271_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|701263_705220_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	711386	765316	4111636	tRNA,transposase	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|711386_713117_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|713169_713598_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|713600_714281_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|714280_714739_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|714775_715750_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|715766_717083_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|717114_717612_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|717698_718388_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|718387_719437_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|719433_720228_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|720396_720747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|720722_721280_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|722409_723360_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|725497_726727_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|726729_728172_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|728276_729422_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|729453_730251_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|730275_731835_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|731831_734204_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|734313_735417_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|735416_736109_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|736252_736954_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|736938_737316_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|738047_738998_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|739157_740030_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|740370_740589_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|740628_742008_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|742049_743447_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|743486_745139_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|745142_746027_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|746026_746968_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|747046_748666_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|748832_749648_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|749715_750285_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|750285_751236_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|751890_752988_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|753021_754287_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|754444_755395_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|755638_756229_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|756244_758689_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|758808_759780_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|759911_760436_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|760395_761346_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|761567_763763_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|763835_764243_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|764365_765316_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	887905	1028473	4111636	transposase	Bacillus_phage(11.11%)	114	NA	NA
WP_023994644.1|887905_888922_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|889118_890102_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|891700_893089_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|893119_894109_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|894219_895452_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|895733_896534_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|896556_898788_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|899575_900022_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|900043_900790_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|900933_901911_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|902544_903156_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|903149_904367_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|904507_905458_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|905454_906174_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|906294_908454_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|908544_908814_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|908902_909109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|909107_909635_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|909653_910433_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|910600_911617_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|911689_912181_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|912191_913907_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|915070_916021_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930051.1|916017_917850_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|918248_918908_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930054.1|919435_920116_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|920397_921114_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|921128_922430_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|924574_927463_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|927686_929039_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|929067_929589_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|929585_931040_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|931074_931323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|931428_932304_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|932329_933385_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|933397_934189_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|934221_935592_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|936768_937719_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|937771_937993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|938152_938365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|938484_939603_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|939699_939915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|940108_940360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|940472_941423_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|941419_941803_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|941857_943672_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|943821_944649_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|944694_945675_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|945671_945884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|945880_947062_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|947225_947960_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|947961_950574_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|950709_952623_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|953238_953649_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|953746_954832_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|954930_955881_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|955877_956852_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|956976_957888_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|958164_958557_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|958686_959637_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|959666_959849_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|960621_961803_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|962018_962696_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|962692_963418_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|963543_964125_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|964495_967177_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_023852687.1|967179_968310_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
WP_010930097.1|968302_969388_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|969474_970374_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|970370_971699_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|971713_972385_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|972572_974288_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|974289_974649_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|974840_975155_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|975197_976418_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|976414_977356_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|977352_978342_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|978376_978961_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|979059_980010_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|980090_981002_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|981062_982208_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|982227_983142_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|983213_983963_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|983962_984892_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|985135_986962_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|987044_987686_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|987875_988910_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|990746_991811_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|992608_993517_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|995004_996279_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|996432_996813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|996820_997693_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|997998_998379_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|998589_999315_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_010929591.1|999410_1000361_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|1000465_1001515_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|1001652_1002669_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1004177_1004750_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1004809_1005541_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1005592_1006510_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1007317_1010497_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_162291318.1|1010493_1010631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096879660.1|1010723_1012925_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930123.1|1012994_1013246_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_010930124.1|1013391_1014006_-	SCO family protein	NA	NA	NA	NA	NA
WP_010930125.1|1014192_1016253_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1016382_1017234_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1017230_1017857_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1017853_1019608_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1019900_1022606_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1022618_1024280_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1024292_1026083_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1026304_1027480_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_023852617.1|1027522_1028473_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	1049424	1100086	4111636	transposase,holin,tRNA	uncultured_Mediterranean_phage(50.0%)	42	NA	NA
WP_005012067.1|1049424_1050375_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1050673_1051411_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1051846_1052170_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1052204_1052765_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1052885_1053761_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1053773_1054721_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1054822_1055116_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1055142_1057200_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1057214_1057715_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1057788_1059495_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1060358_1061411_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1061463_1061853_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1061861_1062494_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1062593_1063610_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1064440_1065448_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1065444_1067088_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1067084_1067972_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1068112_1068586_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1068575_1069598_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1069594_1071022_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1071959_1072976_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1073308_1074244_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1074293_1076174_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1076240_1076585_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1076729_1077866_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1077862_1078936_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1079093_1080530_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1080620_1081262_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010930158.1|1081597_1082614_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1084554_1085505_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1086809_1088231_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1088494_1089211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1089295_1089613_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1089653_1090067_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1090068_1090428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1090470_1092015_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1092098_1092929_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1092963_1094118_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1094160_1095033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1095149_1097438_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1098644_1099109_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1099135_1100086_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	1115340	1181461	4111636	transposase,tRNA	Catovirus(25.0%)	46	NA	NA
WP_010929591.1|1115340_1116291_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1116871_1117579_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1117937_1118924_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1119063_1120077_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1120073_1121024_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1121041_1121182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1121136_1121595_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1121631_1122945_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1122962_1123334_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1123330_1124794_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1124934_1125663_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1125644_1128494_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1128706_1129657_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1129824_1130649_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1130648_1131527_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1133480_1134596_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1134624_1135419_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1135415_1137281_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1137359_1137992_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1137988_1138291_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1138333_1139854_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1139860_1140616_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1140645_1141750_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1141852_1143553_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1143534_1144512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1144521_1145802_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1145794_1146490_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1146523_1147351_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1147632_1150863_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930196.1|1151598_1155525_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1157424_1159221_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1159220_1160189_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1160258_1161104_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1161171_1161726_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1161772_1162723_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1162821_1163454_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1163618_1165901_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1166055_1168752_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1168877_1169366_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1171776_1174647_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1174692_1175907_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1176136_1177564_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_023853245.1|1177661_1178753_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1178765_1179524_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1179611_1180514_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1180510_1181461_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	1321095	1389582	4111636	transposase	Planktothrix_phage(33.33%)	58	NA	NA
WP_005012808.1|1321095_1322046_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930283.1|1322814_1323453_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019247793.1|1324342_1324789_+	glutamate racemase	NA	NA	NA	NA	NA
WP_010930284.1|1324870_1325572_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_003811277.1|1325572_1326340_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930285.1|1326336_1327575_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811272.1|1327574_1328501_-	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930286.1|1328603_1329719_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005015810.1|1329734_1330685_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930287.1|1331038_1331620_-	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_003811267.1|1331616_1332450_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930288.1|1332660_1333974_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811262.1|1334150_1335032_+	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_003811259.1|1335051_1335903_+	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_010930289.1|1335955_1337044_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_010930290.1|1337154_1338282_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811244.1|1338516_1339128_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010929584.1|1339226_1340177_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811293.1|1340398_1340776_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_003811295.1|1340923_1341421_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_010930291.1|1341417_1341945_+	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811298.1|1342078_1342894_+	exported protein	NA	NA	NA	NA	NA
WP_010930292.1|1342906_1344088_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811301.1|1344135_1345029_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930293.1|1345155_1345626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930294.1|1345751_1346579_-	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_003811306.1|1346607_1347384_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_023852802.1|1347380_1347656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930295.1|1347670_1348135_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930296.1|1348146_1348848_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_003811310.1|1348957_1349458_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930297.1|1349540_1350719_-	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811313.1|1352346_1352682_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930298.1|1352869_1354318_+	CoA transferase	NA	NA	NA	NA	NA
WP_023852799.1|1354375_1354720_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_003811316.1|1354826_1355366_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_005012067.1|1355458_1356409_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268679.1|1356426_1356666_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247530.1|1357147_1357579_-	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_010930300.1|1357760_1358165_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010930301.1|1359401_1359725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247533.1|1359727_1360615_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003811322.1|1360647_1361073_-	universal stress protein	NA	NA	NA	NA	NA
WP_019247534.1|1361144_1361498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811324.1|1361737_1362244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930302.1|1362282_1363614_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
WP_003811326.1|1363673_1364489_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010930303.1|1364485_1365340_+	pyridoxine/pyridoxal/pyridoxamine kinase	NA	NA	NA	NA	NA
WP_010930304.1|1368402_1370946_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_010930305.1|1372312_1374067_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_010930306.1|1374063_1376184_-	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_010930307.1|1376188_1378384_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_010930308.1|1378380_1381722_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_010930208.1|1384524_1385475_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1385540_1385720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247449.1|1385836_1386592_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1386578_1387724_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1388631_1389582_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	1696488	1760066	4111636	transposase,protease	Klebsiella_phage(11.11%)	49	NA	NA
WP_005012808.1|1696488_1697439_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930866.1|1703917_1706665_+	autotransporter Vag8	NA	NA	NA	NA	NA
WP_010930865.1|1706685_1707309_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_003813199.1|1707320_1707791_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_003813196.1|1707802_1708189_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_010930864.1|1708250_1708844_-	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_010930863.1|1708834_1709746_-	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_023853662.1|1709761_1711072_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_010930861.1|1711169_1711901_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023853666.1|1712055_1713576_+	DUF853 domain-containing protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
WP_010930859.1|1713636_1714992_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_076879554.1|1715026_1716352_-	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
WP_010930857.1|1716533_1717466_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_010930856.1|1717476_1718970_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930855.1|1718966_1719890_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930854.1|1719892_1721155_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_047122810.1|1721174_1722188_-	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
WP_010930852.1|1722260_1722551_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010930851.1|1722580_1723855_-	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
WP_162268683.1|1723836_1723980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1723997_1724948_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930850.1|1724944_1726582_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	3.6e-21
WP_003813165.1|1726586_1727426_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_023997180.1|1727422_1728430_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930848.1|1728546_1730121_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930847.1|1730540_1732085_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.1e-14
WP_010930846.1|1732189_1733257_+	tartrate dehydrogenase	NA	NA	NA	NA	NA
WP_010930845.1|1733275_1734862_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010930844.1|1734858_1736049_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003813149.1|1737621_1738110_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813147.1|1738169_1739027_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010930843.1|1739089_1740040_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010930842.1|1740102_1741092_+	quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813142.1|1741166_1742048_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_010930841.1|1743105_1743957_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010930840.1|1743973_1744543_-	phosphohydrolase	NA	NA	NA	NA	NA
WP_010930839.1|1744573_1745437_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930838.1|1745596_1746673_+	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
WP_029443740.1|1746737_1748435_+	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003820286.1|1748451_1749282_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
WP_010930836.1|1749310_1750333_+	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012067.1|1750862_1751813_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929591.1|1751911_1752862_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852827.1|1752858_1754181_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_004568205.1|1754281_1754599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809610.1|1754732_1756046_+	pyrimidine permease	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
WP_019247142.1|1756076_1757714_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
WP_003809615.1|1758337_1758814_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_010931070.1|1759115_1760066_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	1799179	1847194	4111636	transposase,tRNA	Moraxella_phage(18.18%)	42	NA	NA
WP_010930522.1|1799179_1800130_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|1800228_1802829_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|1802935_1803940_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|1804048_1805389_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|1805429_1806458_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|1806653_1807199_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|1807195_1807756_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|1807854_1808805_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|1808842_1809430_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|1809447_1809831_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|1811190_1812483_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|1812617_1813658_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|1813755_1814772_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_023852762.1|1815039_1815675_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|1815812_1816571_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_019247478.1|1816555_1817335_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_003811022.1|1817352_1818237_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|1818233_1819013_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|1819039_1819717_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|1820005_1820758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|1820876_1822277_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|1822300_1822699_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|1822874_1823075_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|1823213_1823942_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|1824075_1825491_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|1825494_1826358_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|1826370_1827120_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_010930531.1|1827362_1829318_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_019247882.1|1829299_1829968_-	arylesterase	NA	NA	NA	NA	NA
WP_005012067.1|1830742_1831693_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1831791_1832742_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|1832890_1833229_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|1833286_1833448_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|1833479_1833680_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|1833945_1836519_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_019247811.1|1836589_1839139_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|1841689_1842178_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|1842269_1843421_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|1843474_1844296_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|1844334_1845564_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|1845692_1846133_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_005012808.1|1846243_1847194_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	1908756	1968026	4111636	protease,transposase,tRNA	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1908756_1909707_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1909831_1910641_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929577.1|1910841_1911792_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1913065_1914283_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1915339_1916242_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1916318_1917191_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1917321_1917690_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1917747_1918794_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1918989_1920246_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1920250_1921588_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1921737_1922694_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1922796_1923729_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1923844_1924165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1924157_1924517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1924564_1926139_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1926191_1927136_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1927153_1927984_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1927976_1929611_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1929607_1930963_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1931869_1933447_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1933450_1934725_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1934822_1935197_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1936912_1938046_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1938083_1938689_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1938685_1939504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1939575_1942200_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1942186_1942441_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1942507_1943089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1943392_1943653_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1943818_1944442_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1944441_1945215_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1945211_1946420_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1946445_1946919_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1946992_1947943_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1948041_1948992_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1949090_1950440_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1951205_1951961_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1952053_1954936_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1955258_1955684_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1955711_1956860_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1956856_1957363_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033446257.1|1957378_1958665_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_033446258.1|1958714_1960010_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1960011_1960650_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023852925.1|1960655_1961813_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1961839_1963195_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1963198_1964269_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1964407_1964644_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1964731_1965838_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1965803_1967108_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1967126_1968026_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 16
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	1978266	2022589	4111636	transposase	Staphylococcus_phage(25.0%)	45	NA	NA
WP_005013747.1|1978266_1979217_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1979315_1980266_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1980465_1981551_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1981566_1982328_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1982324_1983248_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|1983346_1983871_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1983879_1984623_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1984718_1984958_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1984971_1985124_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1985209_1986700_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1986791_1987730_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1987726_1987903_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1987905_1988568_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1990189_1990333_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1990329_1991304_-	membrane protein	NA	NA	NA	NA	NA
WP_162268682.1|1991198_1991453_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1991470_1992421_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1992417_1993692_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1993795_1994989_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1994985_1995639_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1995635_1997072_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1997059_1997419_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|1998233_1998374_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1998391_1999342_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|2000387_2002253_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|2002510_2004031_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|2004118_2004769_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|2005717_2007013_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2007034_2007919_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2008017_2008893_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2008882_2009239_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|2009369_2010344_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2010473_2010653_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2010750_2011275_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2011285_2012122_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2012234_2012606_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2012602_2013154_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2013169_2014861_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2014909_2015590_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2015837_2016302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2016471_2017401_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2017413_2018061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2018134_2019952_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2020035_2020986_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2021638_2022589_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2035795	2073285	4111636	transposase	Erysipelothrix_phage(100.0%)	35	NA	NA
WP_010930153.1|2035795_2036812_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019247707.1|2036954_2038307_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_003812172.1|2038481_2038778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2038876_2039827_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2039925_2040876_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247855.1|2041361_2041538_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812044.1|2042222_2043194_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930746.1|2043197_2044052_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_010930745.1|2044070_2044892_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_019247853.1|2044923_2045718_+	amidase	NA	NA	NA	NA	NA
WP_076879628.1|2045766_2046372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247851.1|2046329_2047163_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930744.1|2047448_2048954_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_003812032.1|2048995_2049778_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_003812030.1|2049847_2050294_-	membrane protein	NA	NA	NA	NA	NA
WP_010930743.1|2050290_2051517_-	NnrS family protein	NA	NA	NA	NA	NA
WP_003812026.1|2051509_2051914_-	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_003812024.1|2052073_2052376_+	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_005013747.1|2052372_2053323_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015810.1|2053544_2054495_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852887.1|2054593_2055559_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930740.1|2055696_2056596_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930739.1|2059190_2060678_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_014486081.1|2060688_2061885_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_003816680.1|2061957_2063277_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010930737.1|2063273_2064149_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930736.1|2064179_2065328_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930735.1|2065345_2065660_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_003816687.1|2065681_2066404_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003816690.1|2066403_2067222_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816691.1|2067226_2067754_-	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_010930733.1|2067759_2069016_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930732.1|2069374_2070514_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930731.1|2070591_2071464_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930730.1|2072334_2073285_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2302159	2363507	4111636	transposase,tRNA	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
WP_005013747.1|2302159_2303110_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2303226_2303946_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2304118_2305105_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2305105_2305588_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2305591_2306875_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2306871_2307810_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2307806_2309516_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2309525_2310773_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2312383_2313673_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_003811719.1|2314810_2315584_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
WP_010930601.1|2316245_2316989_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2317063_2317804_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2317999_2318836_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2318886_2319657_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2319706_2320759_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2320755_2321382_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_010930596.1|2321378_2322413_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2322591_2323608_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2323706_2324657_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2327397_2328687_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010930798.1|2328805_2329243_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2329286_2330495_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2330641_2331106_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2331129_2332080_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2333064_2333838_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2333834_2334833_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2334917_2335694_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_010930518.1|2335849_2337454_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
WP_003816541.1|2337834_2338959_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2339085_2339709_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2339705_2341607_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2341655_2342450_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2342462_2343464_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_010930514.1|2343460_2343910_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.2	2.0e-06
WP_010930513.1|2343959_2344808_-	hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2344905_2345448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2345491_2346442_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2346597_2346924_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_033446177.1|2346920_2347202_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2347201_2347681_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2347677_2349306_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2349302_2349647_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2349646_2352580_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2353738_2354689_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2354787_2355084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2355190_2356108_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2356112_2356826_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2356839_2357811_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930505.1|2359560_2359911_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2359914_2361102_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930503.1|2361540_2362263_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2362556_2363507_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2384298	2455452	4111636	transposase	Tetraselmis_virus(10.0%)	54	NA	NA
WP_005012067.1|2384298_2385249_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2385801_2387427_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2387476_2388511_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2388513_2389860_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930477.1|2389856_2391371_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2391361_2392372_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2392845_2393787_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2393795_2394764_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2396303_2397272_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2397449_2398439_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2398485_2399244_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2399433_2400171_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010929584.1|2400269_2401220_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2401404_2402187_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2402180_2402882_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2403121_2403724_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2405050_2406001_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2405997_2407554_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2407546_2408320_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2408378_2409329_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2409410_2410586_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2410599_2412657_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2412653_2413679_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2413690_2414980_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2415002_2416100_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2416096_2416987_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2416983_2419068_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2419099_2420269_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2420310_2421051_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2421050_2421821_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930465.1|2422676_2423462_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2423488_2425573_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2425740_2427696_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2428019_2428520_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2428618_2430145_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2430282_2431170_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2431184_2432138_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2432189_2434280_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2434295_2434682_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2437375_2438179_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2439472_2440375_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2440439_2441216_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2441537_2442587_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2442710_2444381_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2444385_2445180_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2445278_2446229_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2446248_2447154_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2447231_2447930_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2448089_2449034_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930451.1|2449043_2450531_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2450530_2451598_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2451661_2453074_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2453259_2454480_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2454501_2455452_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2540701	2591873	4111636	transposase,tRNA	Salmonella_phage(20.0%)	47	NA	NA
WP_005012067.1|2540701_2541652_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2541750_2542521_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2542517_2543189_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2543185_2543827_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2543839_2544760_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2544920_2546081_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2546122_2547073_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_010930393.1|2547671_2547896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2548060_2549755_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2549876_2550146_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2550261_2550660_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2550670_2551627_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2551763_2552309_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2552329_2554279_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2554666_2555443_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2555448_2555841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2556262_2557213_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2557209_2558307_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2558338_2559289_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2561070_2562312_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2562323_2563097_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2563123_2564074_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2564172_2564955_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2565043_2566270_-	transporter	NA	NA	NA	NA	NA
WP_003814013.1|2566995_2568381_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2568399_2569005_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2569001_2570858_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2570854_2571655_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2571669_2572863_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2572930_2573905_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2574027_2575251_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2575361_2577566_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2577860_2578520_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2578527_2578734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2579072_2579828_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814023.1|2580098_2580614_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2580886_2581204_+	virulence factor	NA	NA	NA	NA	NA
WP_005014990.1|2581391_2581628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2581918_2583274_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_010930945.1|2583320_2584661_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2584762_2585395_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930947.1|2585394_2587764_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2587796_2588756_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2588742_2589429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015014.1|2589425_2589758_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2589873_2590824_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2590922_2591873_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2690168	2730837	4111636	transposase,tRNA	Salmonella_phage(33.33%)	42	NA	NA
WP_010929591.1|2690168_2691119_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2691229_2691412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2691511_2692108_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2692291_2693383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2693882_2694293_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852697.1|2694351_2694681_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
WP_010931007.1|2694698_2697116_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2697128_2698151_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2698225_2698585_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2698600_2698798_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2699133_2700084_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816756.1|2700278_2700728_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2700724_2701675_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931008.1|2701785_2703234_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853496.1|2703348_2703594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2703733_2704684_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2704928_2705642_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2705764_2705992_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2706286_2706925_-	DedA family protein	NA	NA	NA	NA	NA
WP_010931011.1|2707033_2708068_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2708064_2709015_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2709430_2709955_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2709958_2710228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2710426_2711488_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2711571_2713206_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2713207_2714011_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2714039_2714999_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2715002_2716517_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2716553_2717558_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2717989_2718460_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2718495_2719107_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2719137_2719761_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2719841_2721374_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_023853282.1|2721408_2722626_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2722693_2723725_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2723721_2724891_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2724884_2725565_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2725726_2726569_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2726731_2727703_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2727874_2728753_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2728775_2729846_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2729886_2730837_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2786302	2859172	4111636	tRNA,transposase	Moraxella_phage(16.67%)	58	NA	NA
WP_003810909.1|2786302_2786719_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2786829_2787462_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2787490_2787934_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2787955_2789047_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2789101_2789902_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2790037_2790658_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2790797_2791271_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2792410_2793361_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2793357_2801019_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2801259_2805306_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2805618_2806200_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2806196_2807495_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2807574_2808603_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931070.1|2808863_2809814_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2809810_2810761_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2811077_2811683_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2811736_2813050_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2813124_2813595_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2813594_2814383_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2814393_2816046_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2816133_2817084_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2818245_2818752_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2818748_2819513_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2819528_2819813_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2819877_2820867_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2821038_2821968_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2821939_2822626_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2822659_2823205_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2823249_2824515_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2824511_2825414_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2826595_2827540_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2827634_2829152_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2829193_2830822_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2830929_2831811_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2834923_2835298_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2835322_2835661_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2835704_2837339_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2837377_2838724_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2838831_2840253_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2840322_2840907_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2841009_2841960_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2842094_2843201_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2843211_2844309_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2844453_2845659_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2845665_2846187_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2846183_2846666_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2846671_2846923_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2846903_2847389_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2847524_2850986_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2851003_2851888_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2851897_2852329_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2852575_2853079_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2853156_2854557_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2854631_2855507_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2855503_2856511_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2856978_2857284_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2857374_2857965_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2858155_2859172_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2862315	2929125	4111636	transposase,protease	uncultured_Mediterranean_phage(28.57%)	50	NA	NA
WP_023995489.1|2862315_2863266_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2863364_2864315_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2864311_2865106_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2865137_2865842_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2865916_2866717_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2866713_2867121_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2867117_2867759_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931102.1|2867751_2869752_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2871012_2872344_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2872340_2873291_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2874997_2875264_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2875971_2876310_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2880862_2881465_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2881561_2882851_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2882908_2883640_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2883636_2884440_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2884436_2885525_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2885521_2886451_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2886599_2887745_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2887766_2888717_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2888734_2888893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2889047_2892869_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2893025_2893694_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2893698_2895372_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2895390_2896710_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2896714_2899030_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2899085_2901254_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2901250_2906431_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2906529_2906844_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2907071_2907317_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2907411_2907930_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2908029_2909235_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2909350_2910748_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2910864_2911443_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2911515_2912907_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2913074_2914025_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2914305_2914926_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2914922_2915336_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2915332_2916376_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2916431_2916620_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2916629_2917394_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2917484_2918141_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2918232_2918991_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2919016_2920618_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2920818_2921823_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2921923_2922187_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2922304_2923081_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2923671_2924622_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2927005_2928118_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2928174_2929125_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	2959511	2998700	4111636	transposase	Planktothrix_phage(50.0%)	37	NA	NA
WP_005012067.1|2959511_2960462_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268686.1|2960479_2960629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2960582_2961479_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2963756_2965982_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2966146_2967235_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2967191_2967845_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2967892_2968690_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2969221_2970172_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2970252_2971401_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2971457_2972408_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2972506_2972812_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2972840_2973275_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2973276_2974521_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2974517_2975228_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2975242_2976154_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2976516_2976921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2976917_2977376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2977382_2978291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2978287_2979154_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2979140_2979968_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2979978_2981106_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2982183_2983422_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2983463_2984726_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2984732_2985485_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2985536_2985722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2985997_2986462_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2986493_2987153_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2987297_2989406_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2989402_2990353_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2990456_2991077_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2991180_2991921_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2993055_2994180_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2994225_2994594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2994835_2995786_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2996821_2997364_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2997561_2997732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2997749_2998700_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	3404052	3450172	4111636	transposase,tRNA	Staphylococcus_phage(20.0%)	37	NA	NA
WP_005012067.1|3404052_3405003_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3405769_3406864_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3406856_3408191_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3408144_3408828_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3408853_3410017_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3410013_3411015_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3411014_3411887_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3411883_3412633_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3412629_3413421_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3413417_3414557_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3414832_3415618_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3415651_3416434_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3416437_3416827_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3417966_3418830_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3418865_3419954_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_019247959.1|3421253_3424232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3425158_3426037_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005012067.1|3427001_3427952_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3429034_3429985_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3429981_3430449_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3430491_3431262_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3431282_3432083_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3432093_3433503_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3433597_3434383_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3434622_3435639_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3435746_3436139_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3436276_3436957_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3436961_3437933_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3438028_3438979_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814239.1|3440483_3441185_+	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010927010.1|3441184_3442609_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_010931361.1|3443678_3445019_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003820957.1|3445134_3446898_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3447009_3447888_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3448000_3448816_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3448819_3449071_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3449155_3450172_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	3467916	3520323	4111636	transposase,tRNA	Acinetobacter_phage(37.5%)	47	NA	NA
WP_010931363.1|3467916_3468933_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3469028_3469739_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3469735_3470725_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3470820_3472452_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3472454_3473192_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3473347_3474220_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3474569_3475709_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3475705_3476365_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3476436_3477069_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3477098_3477617_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3477627_3478737_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3478783_3479638_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3479639_3480542_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3481764_3482715_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3484471_3485461_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3485636_3486425_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3486421_3487453_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3487471_3488035_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3488090_3489611_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3489874_3490579_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3490586_3491315_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3491429_3491804_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3491846_3493136_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3493132_3494302_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3494298_3495138_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3495197_3496133_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3496145_3497096_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3497194_3498157_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3498188_3498548_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3498672_3499575_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3499576_3501349_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3501383_3502160_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3503483_3504434_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815365.1|3505285_3505606_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003815364.1|3505678_3506560_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815363.1|3506676_3506919_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_010931385.1|3507056_3507527_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815348.1|3507539_3508079_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931386.1|3508113_3509655_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003817813.1|3509753_3510659_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931387.1|3510701_3512102_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003815341.1|3512111_3512534_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931388.1|3512716_3513601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931389.1|3513676_3514753_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_019247688.1|3515059_3517162_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931391.1|3517204_3519274_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_005012808.1|3519372_3520323_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP017158	Bordetella pertussis strain J165 chromosome, complete genome	4111636	3537441	3591242	4111636	transposase,tRNA	Catovirus(11.11%)	46	NA	NA
WP_010931400.1|3537441_3538392_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3538732_3539683_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3539781_3540732_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3541028_3541526_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3541568_3543344_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3543351_3544218_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3544224_3544959_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3546128_3546923_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3547212_3547803_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3547836_3549165_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3549239_3550385_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3550496_3551495_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3551457_3551892_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3553408_3554293_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3554289_3555495_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3555491_3556352_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3556464_3558255_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3558295_3558940_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3558961_3559270_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3559435_3560722_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3562155_3563106_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3565057_3566272_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3566377_3567367_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3567363_3567972_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3567984_3568614_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3568610_3569231_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3569262_3570054_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3570905_3571361_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3571379_3572306_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3572359_3573646_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3574576_3575449_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3575445_3576396_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3576494_3577445_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699695.1|3577549_3577780_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247263.1|3577906_3578296_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010929962.1|3578312_3580694_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_023853194.1|3580686_3582063_-	FAD binding domain in molybdopterin dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929960.1|3582078_3583074_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003819054.1|3583092_3584085_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807624.1|3584325_3584886_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|3584890_3585217_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_010929958.1|3585253_3586066_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003807618.1|3586076_3587159_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929957.1|3587245_3588520_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3589242_3590193_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3590291_3591242_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
