assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	1	388054-388135	1	CRISPRCasFinder	no		csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Orphan	GTCTCCGCCCGATCCACCGAGCTCCT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA|68aa|up_2|NZ_CP023563.1_385767_385971_+,NA|198aa|down_9|NZ_CP023563.1_398104_398698_-	NA|497aa|up_9|NZ_CP023563.1_374809_376300_-	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|837aa|up_8|NZ_CP023563.1_376296_378807_-	cd05153, HomoserineK_II, Type II Homoserine Kinase	NA|680aa|up_7|NZ_CP023563.1_378803_380843_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|392aa|up_6|NZ_CP023563.1_380842_382018_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|455aa|up_5|NZ_CP023563.1_382014_383379_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|409aa|up_4|NZ_CP023563.1_383368_384595_-	COG4671, COG4671, Predicted glycosyl transferase [General function prediction only]	NA|236aa|up_3|NZ_CP023563.1_385063_385771_+	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif	NA|68aa|up_2|NZ_CP023563.1_385767_385971_+	NA	NA|393aa|up_1|NZ_CP023563.1_386000_387179_-	cd05672, M20_ACY1L2-like, M20 Peptidase aminoacylase 1-like protein 2-like, amidohydrolase subfamily	NA|230aa|up_0|NZ_CP023563.1_387248_387938_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|329aa|down_0|NZ_CP023563.1_388162_389149_-	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed	NA|151aa|down_1|NZ_CP023563.1_389347_389800_-	pfam11070, DUF2871, Protein of unknown function (DUF2871)	NA|434aa|down_2|NZ_CP023563.1_389893_391195_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|312aa|down_3|NZ_CP023563.1_391322_392258_+	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins	NA|118aa|down_4|NZ_CP023563.1_392264_392618_-	pfam03699, UPF0182, Uncharacterized protein family (UPF0182)	NA|548aa|down_5|NZ_CP023563.1_392982_394626_-	cd11476, SLC5sbd_DUR3, Na(+)/urea-polyamine cotransporter DUR3, and related proteins; solute-binding domain	NA|343aa|down_6|NZ_CP023563.1_395301_396330_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|311aa|down_7|NZ_CP023563.1_396326_397259_+	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis]	NA|215aa|down_8|NZ_CP023563.1_397463_398108_-	pfam08808, RES, RES domain	NA|198aa|down_9|NZ_CP023563.1_398104_398698_-	NA
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	2	625835-625912	2	CRISPRCasFinder	no		csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Orphan	CCCTCACAGCACGTCGATCAGCC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA|269aa|up_7|NZ_CP023563.1_614646_615453_-,NA	NA|300aa|up_9|NZ_CP023563.1_612169_613069_+	pfam10099, RskA, Anti-sigma-K factor rskA	NA|523aa|up_8|NZ_CP023563.1_613065_614634_+	cd02110, SO_family_Moco_dimer, Subgroup of sulfite oxidase (SO) family molybdopterin binding domains that contains conserved dimerization domain	NA|269aa|up_7|NZ_CP023563.1_614646_615453_-	NA	NA|199aa|up_6|NZ_CP023563.1_615922_616519_-	pfam12089, DUF3566, Transmembrane domain of unknown function (DUF3566)	NA|951aa|up_5|NZ_CP023563.1_616522_619375_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|713aa|up_4|NZ_CP023563.1_619462_621601_-	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|164aa|up_3|NZ_CP023563.1_622041_622533_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|417aa|up_2|NZ_CP023563.1_622529_623780_-	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|205aa|up_1|NZ_CP023563.1_623776_624391_-	PRK09289, PRK09289, riboflavin synthase	NA|354aa|up_0|NZ_CP023563.1_624406_625468_-	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|420aa|down_0|NZ_CP023563.1_626715_627975_-	PRK00064, recF, recombination protein F; Reviewed	NA|375aa|down_1|NZ_CP023563.1_627994_629119_-	PRK07761, PRK07761, DNA polymerase III subunit beta; Validated	NA|566aa|down_2|NZ_CP023563.1_629750_631448_-	PRK14086, dnaA, chromosomal replication initiator protein DnaA	NA|46aa|down_3|NZ_CP023563.1_631860_631998_+	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|123aa|down_4|NZ_CP023563.1_632028_632397_+	pfam00825, Ribonuclease_P, Ribonuclease P	NA|102aa|down_5|NZ_CP023563.1_632393_632699_+	pfam01809, Haemolytic, Haemolytic domain	NA|369aa|down_6|NZ_CP023563.1_632784_633891_+	PRK01315, PRK01315, putative inner membrane protein translocase component YidC; Provisional	NA|256aa|down_7|NZ_CP023563.1_633959_634727_+	COG1847, Jag, Predicted RNA-binding protein [General function prediction only]	NA|225aa|down_8|NZ_CP023563.1_634735_635410_+	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA|262aa|down_9|NZ_CP023563.1_635540_636326_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	3	797633-802399	3,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Type I-E	GGCTCATCCCCGCTGCGCGGGGCGGAC,GGCTCATCCCCGCTGCGCGGGGCGGAC,GCCGGGCTCATCCCCGCTGCGCGGGGCGGAC,GGCTCATCCCCGCTGCGCGGGGCGGAC	27,27,31,27	0	0	NA	NA	NA:NA:NA:NA	79,79,55,55	79	TypeI-E	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA,NA|179aa|down_9|NZ_CP023563.1_813909_814446_+	NA|535aa|up_9|NZ_CP023563.1_784670_786275_+	pfam14067, LssY_C, LssY C-terminus	NA|484aa|up_8|NZ_CP023563.1_786393_787845_+	TIGR00909, putative_amino_acid_transporter, amino acid transporter	NA|138aa|up_7|NZ_CP023563.1_787897_788311_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|882aa|up_6|NZ_CP023563.1_788468_791114_+	COG3211, PhoX, Predicted phosphatase [General function prediction only]	NA|1034aa|up_5|NZ_CP023563.1_791465_794567_+	PRK12650, PRK12650, DUF4040 family protein	NA|111aa|up_4|NZ_CP023563.1_794563_794896_+	PRK07375, PRK07375, Na+/H+ antiporter subunit C	NA|513aa|up_3|NZ_CP023563.1_794892_796431_+	PRK08375, PRK08375, putative monovalent cation/H+ antiporter subunit D; Reviewed	NA|165aa|up_2|NZ_CP023563.1_796433_796928_+	pfam01899, MNHE, Na+/H+ ion antiporter subunit	NA|87aa|up_1|NZ_CP023563.1_796924_797185_+	PRK12612, PRK12612, putative monovalent cation/H+ antiporter subunit F; Reviewed	NA|132aa|up_0|NZ_CP023563.1_797181_797577_+	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed	cas2|115aa|down_0|NZ_CP023563.1_802497_802842_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|314aa|down_1|NZ_CP023563.1_802838_803780_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|229aa|down_2|NZ_CP023563.1_803781_804468_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|235aa|down_3|NZ_CP023563.1_804464_805169_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|377aa|down_4|NZ_CP023563.1_805165_806296_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|221aa|down_5|NZ_CP023563.1_806354_807017_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|563aa|down_6|NZ_CP023563.1_807009_808698_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|943aa|down_7|NZ_CP023563.1_808766_811595_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|699aa|down_8|NZ_CP023563.1_811768_813865_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|179aa|down_9|NZ_CP023563.1_813909_814446_+	NA
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	4	1111534-1111634	4	CRISPRCasFinder	no	csa3	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Type I-A	CGCGCCCTCTCGTCTCCCCGCCGCG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA,NA|278aa|down_0|NZ_CP023563.1_1111923_1112757_+	NA|490aa|up_9|NZ_CP023563.1_1098888_1100358_-	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like	NA|646aa|up_8|NZ_CP023563.1_1100400_1102338_-	PRK08294, PRK08294, phenol 2-monooxygenase; Provisional	NA|475aa|up_7|NZ_CP023563.1_1102483_1103908_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|509aa|up_6|NZ_CP023563.1_1104072_1105599_+	PRK12764, PRK12764, fumarylacetoacetate hydrolase family protein	NA|236aa|up_5|NZ_CP023563.1_1105580_1106288_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|504aa|up_4|NZ_CP023563.1_1106341_1107853_+	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like	NA|374aa|up_3|NZ_CP023563.1_1107896_1109018_+	TIGR02295, Substrate_Complex_Of_Homoprotocatechuate, 3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA|263aa|up_2|NZ_CP023563.1_1109030_1109819_+	TIGR02312, 2-keto-4-pentenoate_hydratase, 2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA|280aa|up_1|NZ_CP023563.1_1109803_1110643_+	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|251aa|up_0|NZ_CP023563.1_1110759_1111512_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|278aa|down_0|NZ_CP023563.1_1111923_1112757_+	NA	NA|286aa|down_1|NZ_CP023563.1_1112777_1113635_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|237aa|down_2|NZ_CP023563.1_1113737_1114448_-	PRK00043, thiE, thiamine phosphate synthase	NA|273aa|down_3|NZ_CP023563.1_1114444_1115263_-	cd01170, THZ_kinase, 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz	NA|452aa|down_4|NZ_CP023563.1_1115259_1116615_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|561aa|down_5|NZ_CP023563.1_1116611_1118294_-	PRK14713, PRK14713, bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA|388aa|down_6|NZ_CP023563.1_1118467_1119631_+	TIGR00619, Nuclease_SbcCD_subunit_D, exonuclease SbcD	NA|1023aa|down_7|NZ_CP023563.1_1119627_1122696_+	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|1067aa|down_8|NZ_CP023563.1_1122764_1125965_-	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family	NA|224aa|down_9|NZ_CP023563.1_1126115_1126787_-	pfam04892, VanZ, VanZ like family
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	5	2144961-2145116	5	CRISPRCasFinder	no		csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Orphan	AGGACGCCGCCCTCTCACGGCGGTAACACCGGTTCAAATCCGGTACGGGGTACGA	55	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA|95aa|up_8|NZ_CP023563.1_2135909_2136194_+,NA|103aa|up_7|NZ_CP023563.1_2136292_2136601_+,NA|328aa|up_5|NZ_CP023563.1_2139262_2140246_-,NA|226aa|up_3|NZ_CP023563.1_2141168_2141846_-,NA|59aa|up_2|NZ_CP023563.1_2141996_2142173_-,NA	NA|244aa|up_9|NZ_CP023563.1_2135178_2135910_+	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit	NA|95aa|up_8|NZ_CP023563.1_2135909_2136194_+	NA	NA|103aa|up_7|NZ_CP023563.1_2136292_2136601_+	NA	NA|854aa|up_6|NZ_CP023563.1_2136679_2139241_-	pfam12029, DUF3516, Domain of unknown function (DUF3516)	NA|328aa|up_5|NZ_CP023563.1_2139262_2140246_-	NA	NA|181aa|up_4|NZ_CP023563.1_2140424_2140967_+	pfam09965, DUF2199, Uncharacterized protein conserved in bacteria (DUF2199)	NA|226aa|up_3|NZ_CP023563.1_2141168_2141846_-	NA	NA|59aa|up_2|NZ_CP023563.1_2141996_2142173_-	NA	NA|259aa|up_1|NZ_CP023563.1_2142306_2143083_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|507aa|up_0|NZ_CP023563.1_2143129_2144650_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|273aa|down_0|NZ_CP023563.1_2145204_2146023_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|245aa|down_1|NZ_CP023563.1_2146047_2146782_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|480aa|down_2|NZ_CP023563.1_2146923_2148363_+	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|203aa|down_3|NZ_CP023563.1_2148387_2148996_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|440aa|down_4|NZ_CP023563.1_2149105_2150425_+	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|193aa|down_5|NZ_CP023563.1_2150427_2151006_+	pfam11066, DUF2867, Protein of unknown function (DUF2867)	NA|268aa|down_6|NZ_CP023563.1_2151002_2151806_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|337aa|down_7|NZ_CP023563.1_2151805_2152816_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|372aa|down_8|NZ_CP023563.1_2152830_2153946_+	PRK01966, ddl, D-alanine--D-alanine ligase	NA|152aa|down_9|NZ_CP023563.1_2153963_2154419_-	pfam12028, DUF3515, Protein of unknown function (DUF3515)
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	6	2253198-2253332	6	CRISPRCasFinder	no	Cas9_archaeal	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Type II-A, Type II-B, or Type II-C?	GGCCCCGGGCGCCCGAGGTGCGGC	24	1	1	2253267-2253308	NZ_CP023563.1_2253300-2253341	NA	2	2	TypeII-A,TypeII-B,orTypeII-C?	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA,NA|275aa|down_0|NZ_CP023563.1_2253989_2254814_+,NA|129aa|down_3|NZ_CP023563.1_2260021_2260408_+	NA|511aa|up_9|NZ_CP023563.1_2239727_2241260_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|500aa|up_8|NZ_CP023563.1_2241341_2242841_-	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|284aa|up_7|NZ_CP023563.1_2242916_2243768_+	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|213aa|up_6|NZ_CP023563.1_2243784_2244423_+	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|435aa|up_5|NZ_CP023563.1_2244491_2245796_+	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|244aa|up_4|NZ_CP023563.1_2245858_2246590_+	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown]	NA|624aa|up_3|NZ_CP023563.1_2246697_2248569_+	PRK05899, PRK05899, transketolase; Reviewed	NA|406aa|up_2|NZ_CP023563.1_2248591_2249809_-	COG3177, COG3177, Fic family protein [Function unknown]	NA|600aa|up_1|NZ_CP023563.1_2249885_2251685_-	PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed	NA|463aa|up_0|NZ_CP023563.1_2251804_2253193_+	pfam01704, UDPGP, UTP--glucose-1-phosphate uridylyltransferase	NA|275aa|down_0|NZ_CP023563.1_2253989_2254814_+	NA	NA|361aa|down_1|NZ_CP023563.1_2254908_2255991_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|1111aa|down_2|NZ_CP023563.1_2256263_2259596_-	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|129aa|down_3|NZ_CP023563.1_2260021_2260408_+	NA	NA|203aa|down_4|NZ_CP023563.1_2260455_2261064_-	PRK04296, PRK04296, thymidine kinase; Provisional	NA|414aa|down_5|NZ_CP023563.1_2261091_2262333_-	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|327aa|down_6|NZ_CP023563.1_2262399_2263380_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|344aa|down_7|NZ_CP023563.1_2263487_2264519_+	PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed	NA|900aa|down_8|NZ_CP023563.1_2264515_2267215_+	PRK09274, PRK09274, peptide synthase; Provisional	NA|331aa|down_9|NZ_CP023563.1_2267211_2268204_+	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	7	2287292-2287370	7	CRISPRCasFinder	no		csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Orphan	GCTGGGGCTGAGCGACGAACCGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA,NA	NA|305aa|up_9|NZ_CP023563.1_2276267_2277182_+	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif	NA|211aa|up_8|NZ_CP023563.1_2277193_2277826_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|613aa|up_7|NZ_CP023563.1_2277988_2279827_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|252aa|up_6|NZ_CP023563.1_2279867_2280623_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|387aa|up_5|NZ_CP023563.1_2280628_2281789_+	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated	NA|127aa|up_4|NZ_CP023563.1_2281811_2282192_+	pfam08818, DUF1801, Domain of unknown function (DU1801)	NA|255aa|up_3|NZ_CP023563.1_2282261_2283026_-	pfam09685, DUF4870, Domain of unknown function (DUF4870)	NA|294aa|up_2|NZ_CP023563.1_2283182_2284064_-	pfam11296, DUF3097, Protein of unknown function (DUF3097)	NA|337aa|up_1|NZ_CP023563.1_2284236_2285247_+	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|376aa|up_0|NZ_CP023563.1_2285349_2286477_+	PRK14278, PRK14278, chaperone protein DnaJ; Provisional	NA|216aa|down_0|NZ_CP023563.1_2287385_2288033_-	COG1989, PulO, Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]	NA|297aa|down_1|NZ_CP023563.1_2288034_2288925_-	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|310aa|down_2|NZ_CP023563.1_2288931_2289861_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|482aa|down_3|NZ_CP023563.1_2289857_2291303_-	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]	NA|397aa|down_4|NZ_CP023563.1_2291485_2292676_-	cd03111, CpaE-like, pilus assembly ATPase CpaE	NA|264aa|down_5|NZ_CP023563.1_2292672_2293464_-	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB	NA|328aa|down_6|NZ_CP023563.1_2293460_2294444_-	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like	NA|130aa|down_7|NZ_CP023563.1_2294440_2294830_-	pfam07811, TadE, TadE-like protein	NA|75aa|down_8|NZ_CP023563.1_2294961_2295186_-	pfam04964, Flp_Fap, Flp/Fap pilin component	NA|181aa|down_9|NZ_CP023563.1_2295789_2296332_-	pfam03358, FMN_red, NADPH-dependent FMN reductase
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	8	2799359-2799453	8	CRISPRCasFinder	no		csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Orphan	CCGCCGGAGCCCAGCGATACCGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA|98aa|up_7|NZ_CP023563.1_2788935_2789229_-,NA|218aa|down_0|NZ_CP023563.1_2801155_2801809_+	NA|313aa|up_9|NZ_CP023563.1_2787141_2788080_-	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion]	NA|120aa|up_8|NZ_CP023563.1_2788466_2788826_-	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones]	NA|98aa|up_7|NZ_CP023563.1_2788935_2789229_-	NA	NA|471aa|up_6|NZ_CP023563.1_2789225_2790638_-	PRK07907, PRK07907, hypothetical protein; Provisional	NA|198aa|up_5|NZ_CP023563.1_2790739_2791333_+	pfam11241, DUF3043, Protein of unknown function (DUF3043)	NA|606aa|up_4|NZ_CP023563.1_2791447_2793265_-	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|651aa|up_3|NZ_CP023563.1_2793602_2795555_+	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|128aa|up_2|NZ_CP023563.1_2795632_2796016_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|369aa|up_1|NZ_CP023563.1_2796215_2797322_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|459aa|up_0|NZ_CP023563.1_2797619_2798996_-	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|218aa|down_0|NZ_CP023563.1_2801155_2801809_+	NA	NA|804aa|down_1|NZ_CP023563.1_2801739_2804151_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|189aa|down_2|NZ_CP023563.1_2804243_2804810_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|393aa|down_3|NZ_CP023563.1_2804806_2805985_-	PRK13022, secF, protein translocase subunit SecF	NA|643aa|down_4|NZ_CP023563.1_2805981_2807910_-	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|114aa|down_5|NZ_CP023563.1_2808025_2808367_-	pfam02699, YajC, Preprotein translocase subunit	NA|364aa|down_6|NZ_CP023563.1_2808546_2809638_-	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|203aa|down_7|NZ_CP023563.1_2809634_2810243_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|198aa|down_8|NZ_CP023563.1_2810269_2810863_-	PRK00039, ruvC, Holliday junction resolvase; Reviewed	NA|253aa|down_9|NZ_CP023563.1_2810933_2811692_-	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	9	2923851-2923928	9	CRISPRCasFinder	no		csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Orphan	TGGCCGCTCTCCTACCGTTCGTCC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA|256aa|up_0|NZ_CP023563.1_2922984_2923752_-,NA	NA|170aa|up_9|NZ_CP023563.1_2914184_2914694_-	pfam11377, DUF3180, Protein of unknown function (DUF3180)	NA|306aa|up_8|NZ_CP023563.1_2914690_2915608_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|289aa|up_7|NZ_CP023563.1_2915604_2916471_-	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes	NA|189aa|up_6|NZ_CP023563.1_2916482_2917049_-	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|711aa|up_5|NZ_CP023563.1_2917050_2919183_-	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH	NA|190aa|up_4|NZ_CP023563.1_2919187_2919757_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|365aa|up_3|NZ_CP023563.1_2919786_2920881_-	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|470aa|up_2|NZ_CP023563.1_2920880_2922290_-	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family	NA|171aa|up_1|NZ_CP023563.1_2922357_2922870_+	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|256aa|up_0|NZ_CP023563.1_2922984_2923752_-	NA	NA|357aa|down_0|NZ_CP023563.1_2924234_2925305_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|228aa|down_1|NZ_CP023563.1_2925333_2926017_-	cd00487, Pep_deformylase, Polypeptide or peptide deformylase; a family of metalloenzymes that catalyzes the removal of the N-terminal formyl group in a growing polypeptide chain following translation initiation during protein synthesis in prokaryotes	NA|362aa|down_2|NZ_CP023563.1_2926244_2927330_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|414aa|down_3|NZ_CP023563.1_2927506_2928748_+	pfam13224, DUF4032, Domain of unknown function (DUF4032)	NA|243aa|down_4|NZ_CP023563.1_2928792_2929521_+	COG2364, COG2364, Predicted membrane protein [Function unknown]	NA|323aa|down_5|NZ_CP023563.1_2929728_2930697_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|482aa|down_6|NZ_CP023563.1_2930718_2932164_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|161aa|down_7|NZ_CP023563.1_2932274_2932757_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|374aa|down_8|NZ_CP023563.1_2932818_2933940_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|441aa|down_9|NZ_CP023563.1_2934088_2935411_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_002407185.1_ASM240718v1	NZ_CP023563	Brachybacterium vulturis strain VM2412 chromosome, complete genome	10	3281866-3281949	10	CRISPRCasFinder	no		csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	Orphan	GTGACCAGGTTGGTGCACGGGTTAGTG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,Cas9_archaeal,DinG	NA|258aa|up_1|NZ_CP023563.1_3279835_3280609_+,NA|105aa|down_0|NZ_CP023563.1_3282650_3282965_+,NA|512aa|down_5|NZ_CP023563.1_3288155_3289691_-	NA|221aa|up_9|NZ_CP023563.1_3271007_3271670_-	PRK12553, PRK12553, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|192aa|up_8|NZ_CP023563.1_3271743_3272319_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|278aa|up_7|NZ_CP023563.1_3272741_3273575_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|198aa|up_6|NZ_CP023563.1_3273629_3274223_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|522aa|up_5|NZ_CP023563.1_3274352_3275918_-	PRK01490, tig, trigger factor; Provisional	NA|485aa|up_4|NZ_CP023563.1_3276421_3277876_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|190aa|up_3|NZ_CP023563.1_3277892_3278462_+	PLN03241, PLN03241, magnesium chelatase subunit H; Provisional	NA|231aa|up_2|NZ_CP023563.1_3279039_3279732_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|258aa|up_1|NZ_CP023563.1_3279835_3280609_+	NA	NA|159aa|up_0|NZ_CP023563.1_3280671_3281148_+	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|105aa|down_0|NZ_CP023563.1_3282650_3282965_+	NA	NA|461aa|down_1|NZ_CP023563.1_3282961_3284344_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|519aa|down_2|NZ_CP023563.1_3284832_3286389_+	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism]	NA|168aa|down_3|NZ_CP023563.1_3286385_3286889_+	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|408aa|down_4|NZ_CP023563.1_3286901_3288125_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|512aa|down_5|NZ_CP023563.1_3288155_3289691_-	NA	NA|229aa|down_6|NZ_CP023563.1_3289687_3290374_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|180aa|down_7|NZ_CP023563.1_3290683_3291223_+	COG1329, COG1329, Transcriptional regulators, similar to M	NA|421aa|down_8|NZ_CP023563.1_3291287_3292550_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|226aa|down_9|NZ_CP023563.1_3292702_3293380_-	cd08899, SRPBCC_CalC_Aha1-like_6, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins
