assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	1	82161-82284	1	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	CTCAACATAAAAGGCAACGCAGGTTGCCTTTT	32	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA|156aa|up_3|NZ_CP023529.1_76519_76987_+,NA|348aa|down_8|NZ_CP023529.1_91794_92838_+	NA|242aa|up_9|NZ_CP023529.1_69001_69727_-	pfam00196, GerE, Bacterial regulatory proteins, luxR family	NA|221aa|up_8|NZ_CP023529.1_69753_70416_-	pfam00563, EAL, EAL domain	NA|92aa|up_7|NZ_CP023529.1_71042_71318_+	PRK09929, PRK09929, hypothetical protein; Provisional	NA|289aa|up_6|NZ_CP023529.1_71723_72590_-	cd01948, EAL, EAL domain	NA|561aa|up_5|NZ_CP023529.1_72670_74353_-	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional	NA|277aa|up_4|NZ_CP023529.1_75705_76536_+	COG3710, CadC, DNA-binding winged-HTH domains [Transcription]	NA|156aa|up_3|NZ_CP023529.1_76519_76987_+	NA	NA|362aa|up_2|NZ_CP023529.1_77272_78358_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|729aa|up_1|NZ_CP023529.1_78411_80598_+	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|463aa|up_0|NZ_CP023529.1_80717_82106_+	PRK10249, PRK10249, phenylalanine transporter; Provisional	NA|413aa|down_0|NZ_CP023529.1_82486_83725_+	cd06177, MFS_NHS, Nucleoside:H(+) symporter family of the Major Facilitator Superfamily of transporters	NA|342aa|down_1|NZ_CP023529.1_83740_84766_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|381aa|down_2|NZ_CP023529.1_84758_85901_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|326aa|down_3|NZ_CP023529.1_85976_86954_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|415aa|down_4|NZ_CP023529.1_86957_88202_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|476aa|down_5|NZ_CP023529.1_88279_89707_-	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|291aa|down_6|NZ_CP023529.1_89815_90688_+	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|203aa|down_7|NZ_CP023529.1_90724_91333_-	pfam15977, HTH_46, Winged helix-turn-helix DNA binding	NA|348aa|down_8|NZ_CP023529.1_91794_92838_+	NA	NA|218aa|down_9|NZ_CP023529.1_92834_93488_-	PRK11053, PRK11053, oxygen-insensitive NAD(P)H nitroreductase
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	2	145044-145184	2	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	TAAAAGTAAAATGGCAACGTTGTAGCCATTTTGAGTGTCTTCTCCCT	47	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA	NA|173aa|up_9|NZ_CP023529.1_131300_131819_-	pfam08020, DUF1706, Protein of unknown function (DUF1706)	NA|304aa|up_8|NZ_CP023529.1_132559_133471_+	cd01137, PsaA, Metal binding protein PsaA	NA|275aa|up_7|NZ_CP023529.1_133474_134299_+	PRK15056, PRK15056, manganese/iron ABC transporter ATP-binding protein	NA|286aa|up_6|NZ_CP023529.1_134295_135153_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|280aa|up_5|NZ_CP023529.1_135149_135989_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|223aa|up_4|NZ_CP023529.1_135957_136626_-	PRK10251, PRK10251, enterobactin synthase subunit EntD	NA|751aa|up_3|NZ_CP023529.1_136872_139125_-	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor	NA|402aa|up_2|NZ_CP023529.1_139376_140582_+	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional	NA|71aa|up_1|NZ_CP023529.1_140618_140831_+	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1291aa|up_0|NZ_CP023529.1_140827_144700_+	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF	NA|267aa|down_0|NZ_CP023529.1_145296_146097_-	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein	NA|331aa|down_1|NZ_CP023529.1_146093_147086_-	PRK10440, PRK10440, iron-enterobactin ABC transporter permease	NA|335aa|down_2|NZ_CP023529.1_147082_148087_-	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease	NA|416aa|down_3|NZ_CP023529.1_148322_149570_+	PRK10489, PRK10489, enterobactin transporter EntS	NA|320aa|down_4|NZ_CP023529.1_149774_150734_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|392aa|down_5|NZ_CP023529.1_150921_152097_+	PRK15016, PRK15016, isochorismate synthase EntC; Provisional	NA|537aa|down_6|NZ_CP023529.1_152106_153717_+	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase	NA|285aa|down_7|NZ_CP023529.1_153727_154582_+	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|252aa|down_8|NZ_CP023529.1_154581_155337_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|138aa|down_9|NZ_CP023529.1_155336_155750_+	PRK10254, PRK10254, proofreading thioesterase EntH
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	3	860966-861089	3	CRISPRCasFinder	no	DEDDh	DinG,cas3,csa3,DEDDh,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA|56aa|up_4|NZ_CP023529.1_856807_856975_+,NA|47aa|up_3|NZ_CP023529.1_857229_857370_-,NA|30aa|down_7|NZ_CP023529.1_870371_870461_+	NA|70aa|up_9|NZ_CP023529.1_852998_853208_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|229aa|up_8|NZ_CP023529.1_853454_854141_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|259aa|up_7|NZ_CP023529.1_854137_854914_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|272aa|up_6|NZ_CP023529.1_854913_855729_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|277aa|up_5|NZ_CP023529.1_855730_856561_-	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold	NA|56aa|up_4|NZ_CP023529.1_856807_856975_+	NA	NA|47aa|up_3|NZ_CP023529.1_857229_857370_-	NA	NA|264aa|up_2|NZ_CP023529.1_857497_858289_+	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	NA|212aa|up_1|NZ_CP023529.1_858361_858997_+	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|537aa|up_0|NZ_CP023529.1_859164_860775_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|458aa|down_0|NZ_CP023529.1_861249_862623_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|213aa|down_1|NZ_CP023529.1_862850_863489_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|426aa|down_2|NZ_CP023529.1_863943_865221_+	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed	NA|383aa|down_3|NZ_CP023529.1_865361_866510_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|400aa|down_4|NZ_CP023529.1_866807_868007_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|304aa|down_5|NZ_CP023529.1_868119_869031_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP023529.1_869049_870075_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP023529.1_870371_870461_+	NA	NA|389aa|down_8|NZ_CP023529.1_870624_871791_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP023529.1_871829_872411_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	4	2434184-2434295	4	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	GGGTGATTCTCTCTCCCCTTGGGAGA	26	0	0	NA	NA	NA	2	2	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA	NA|254aa|up_9|NZ_CP023529.1_2425873_2426635_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP023529.1_2426615_2427665_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP023529.1_2427661_2428141_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP023529.1_2428140_2428851_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP023529.1_2428870_2429182_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP023529.1_2429348_2429672_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP023529.1_2429723_2430329_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP023529.1_2430328_2431756_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP023529.1_2431765_2432674_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|348aa|up_0|NZ_CP023529.1_2433036_2434080_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|245aa|down_0|NZ_CP023529.1_2434315_2435050_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_1|NZ_CP023529.1_2435063_2436776_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|602aa|down_2|NZ_CP023529.1_2436775_2438581_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|122aa|down_3|NZ_CP023529.1_2438942_2439308_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|224aa|down_4|NZ_CP023529.1_2439340_2440012_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|237aa|down_5|NZ_CP023529.1_2440065_2440776_-	PRK01130, PRK01130, putative N-acetylmannosamine-6-phosphate 2-epimerase	NA|519aa|down_6|NZ_CP023529.1_2440772_2442329_-	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|275aa|down_7|NZ_CP023529.1_2442495_2443320_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|432aa|down_8|NZ_CP023529.1_2443376_2444672_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_9|NZ_CP023529.1_2444754_2446392_-	PRK05380, pyrG, CTP synthetase; Validated
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	5	2788183-2788306	5	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	AGTCACCGTTTTTAGTCTTTGCTCCCTCTCCC	32	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA	NA|229aa|up_9|NZ_CP023529.1_2776585_2777272_+	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|98aa|up_8|NZ_CP023529.1_2777309_2777603_-	PRK10486, PRK10486, (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA|296aa|up_7|NZ_CP023529.1_2777599_2778487_-	PRK08227, PRK08227, 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA|334aa|up_6|NZ_CP023529.1_2778499_2779501_-	PRK15408, PRK15408, autoinducer 2 ABC transporter substrate-binding protein LsrB	NA|328aa|up_5|NZ_CP023529.1_2779497_2780481_-	PRK15038, PRK15038, autoinducer 2 ABC transporter permease LsrD	NA|344aa|up_4|NZ_CP023529.1_2780481_2781513_-	PRK15432, PRK15432, autoinducer 2 ABC transporter permease LsrC; Provisional	NA|496aa|up_3|NZ_CP023529.1_2781509_2782997_-	PRK15439, PRK15439, autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional	NA|324aa|up_2|NZ_CP023529.1_2783212_2784184_+	PRK15418, PRK15418, transcriptional regulator LsrR; Provisional	NA|531aa|up_1|NZ_CP023529.1_2784216_2785809_+	PRK10939, PRK10939, autoinducer-2 (AI-2) kinase; Provisional	NA|674aa|up_0|NZ_CP023529.1_2786117_2788139_+	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|379aa|down_0|NZ_CP023529.1_2788353_2789490_-	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA|167aa|down_1|NZ_CP023529.1_2789573_2790074_+	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|333aa|down_2|NZ_CP023529.1_2790333_2791332_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|323aa|down_3|NZ_CP023529.1_2791750_2792719_+	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|414aa|down_4|NZ_CP023529.1_2793003_2794245_+	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|496aa|down_5|NZ_CP023529.1_2794363_2795851_-	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus	NA|471aa|down_6|NZ_CP023529.1_2795868_2797281_-	pfam02614, UxaC, Glucuronate isomerase	NA|433aa|down_7|NZ_CP023529.1_2797755_2799054_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|259aa|down_8|NZ_CP023529.1_2799182_2799959_+	PRK11523, PRK11523, transcriptional regulator ExuR	NA|221aa|down_9|NZ_CP023529.1_2800307_2800970_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	6	3113222-3113350	6	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	GCAACGTGCGTTGCCTTTTGCTTTGAGCGGATGCGGCC	38	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA	NA|232aa|up_9|NZ_CP023529.1_3102839_3103535_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|346aa|up_8|NZ_CP023529.1_3103658_3104696_-	PRK10206, PRK10206, putative oxidoreductase; Provisional	NA|163aa|up_7|NZ_CP023529.1_3105117_3105606_+	PRK10140, PRK10140, N-acetyltransferase	NA|582aa|up_6|NZ_CP023529.1_3105690_3107436_-	PRK09615, ggt, gamma-glutamyltranspeptidase; Reviewed	NA|142aa|up_5|NZ_CP023529.1_3107558_3107984_+	PRK10350, PRK10350, DUF2756 family protein	NA|250aa|up_4|NZ_CP023529.1_3107964_3108714_-	PRK09454, ugpQ, cytoplasmic glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_3|NZ_CP023529.1_3108710_3109781_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|282aa|up_2|NZ_CP023529.1_3109782_3110628_-	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE	NA|296aa|up_1|NZ_CP023529.1_3110624_3111512_-	PRK10561, PRK10561, sn-glycerol-3-phosphate ABC transporter permease UgpA	NA|439aa|up_0|NZ_CP023529.1_3111670_3112987_-	PRK10974, PRK10974, sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA|238aa|down_0|NZ_CP023529.1_3113429_3114143_-	PRK11614, livF, high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF	NA|256aa|down_1|NZ_CP023529.1_3114144_3114912_-	PRK11300, livG, leucine/isoleucine/valine transporter ATP-binding subunit; Provisional	NA|426aa|down_2|NZ_CP023529.1_3114908_3116186_-	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional	NA|309aa|down_3|NZ_CP023529.1_3116182_3117109_-	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH	NA|370aa|down_4|NZ_CP023529.1_3117170_3118280_-	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein	NA|128aa|down_5|NZ_CP023529.1_3118703_3119087_+	NF033213, matur_PanM, aspartate 1-decarboxylase autocleavage activator PanM	NA|367aa|down_6|NZ_CP023529.1_3119415_3120516_-	PRK15404, PRK15404, high-affinity branched-chain amino acid ABC transporter substrate-binding protein	NA|422aa|down_7|NZ_CP023529.1_3120713_3121979_-	PRK06777, PRK06777, 4-aminobutyrate--2-oxoglutarate transaminase	NA|286aa|down_8|NZ_CP023529.1_3122139_3122997_-	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|352aa|down_9|NZ_CP023529.1_3123254_3124310_-	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	7	3131041-3131176	7	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	GGGAGAGGGAGAAATGACTCACACGGCAACCGACGTTGCCGTTTTTT	47	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA	NA|422aa|up_9|NZ_CP023529.1_3120713_3121979_-	PRK06777, PRK06777, 4-aminobutyrate--2-oxoglutarate transaminase	NA|286aa|up_8|NZ_CP023529.1_3122139_3122997_-	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|352aa|up_7|NZ_CP023529.1_3123254_3124310_-	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional	NA|222aa|up_6|NZ_CP023529.1_3124302_3124968_-	PRK10908, PRK10908, cell division ATP-binding protein FtsE	NA|512aa|up_5|NZ_CP023529.1_3124970_3126506_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|200aa|up_4|NZ_CP023529.1_3126644_3127244_+	PRK10909, rsmD, 16S rRNA m(2)G966-methyltransferase; Provisional	NA|94aa|up_3|NZ_CP023529.1_3127227_3127509_+	PRK10910, PRK10910, DUF1145 family protein	NA|120aa|up_2|NZ_CP023529.1_3127626_3127986_-	pfam10694, DUF2500, Protein of unknown function (DUF2500)	NA|209aa|up_1|NZ_CP023529.1_3128115_3128742_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|729aa|up_0|NZ_CP023529.1_3128817_3131004_+	PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional	NA|429aa|down_0|NZ_CP023529.1_3131183_3132470_-	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|170aa|down_1|NZ_CP023529.1_3132480_3132990_-	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|328aa|down_2|NZ_CP023529.1_3133015_3133999_-	cd13671, PBP2_TRAP_SBP_like_3, Uncharacterized substrate-binding protein of the Tripartite ATP-independent  Periplasmic transporter family; the type 2 periplasmic-binding protein fold	NA|82aa|down_3|NZ_CP023529.1_3134145_3134391_-	PRK00299, PRK00299, sulfurtransferase TusA	NA|222aa|down_4|NZ_CP023529.1_3134612_3135278_+	PRK11212, PRK11212, 7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter	NA|186aa|down_5|NZ_CP023529.1_3135350_3135908_+	PRK11615, PRK11615, hypothetical protein; Provisional	NA|410aa|down_6|NZ_CP023529.1_3135900_3137130_-	PRK05122, PRK05122, major facilitator superfamily transporter; Provisional	NA|350aa|down_7|NZ_CP023529.1_3137274_3138324_+	PRK12287, tqsA, pheromone autoinducer 2 transporter; Reviewed	NA|194aa|down_8|NZ_CP023529.1_3138591_3139173_+	PRK10351, PRK10351, 4'-phosphopantetheinyl transferase AcpT	NA|265aa|down_9|NZ_CP023529.1_3139241_3140036_+	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	8	3830175-3830335	8	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	CCCTCGATCCTTTGGGGAGCATTCTGGGGAAAAGACGCACAGTACGCCCTG	51	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA	NA|438aa|up_9|NZ_CP023529.1_3818231_3819545_+	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|225aa|up_8|NZ_CP023529.1_3819584_3820259_-	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|716aa|up_7|NZ_CP023529.1_3820484_3822632_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|244aa|up_6|NZ_CP023529.1_3822887_3823619_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|335aa|up_5|NZ_CP023529.1_3823615_3824620_-	COG0524, RbsK, Sugar kinases, ribokinase family [Carbohydrate transport and metabolism]	NA|287aa|up_4|NZ_CP023529.1_3824619_3825480_-	PRK06801, PRK06801, ketose 1,6-bisphosphate aldolase	NA|229aa|up_3|NZ_CP023529.1_3825489_3826176_-	pfam07385, Lyx_isomer, D-lyxose isomerase	NA|314aa|up_2|NZ_CP023529.1_3826511_3827453_-	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems	NA|332aa|up_1|NZ_CP023529.1_3827482_3828478_-	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only]	NA|507aa|up_0|NZ_CP023529.1_3828474_3829995_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|761aa|down_0|NZ_CP023529.1_3830421_3832704_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|108aa|down_1|NZ_CP023529.1_3832773_3833097_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|162aa|down_2|NZ_CP023529.1_3833161_3833647_-	PRK09823, PRK09823, putative inner membrane protein; Provisional	NA|253aa|down_3|NZ_CP023529.1_3833718_3834477_-	PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional	NA|145aa|down_4|NZ_CP023529.1_3834486_3834921_-	PRK10146, PRK10146, aminoalkylphosphonate N-acetyltransferase	NA|186aa|down_5|NZ_CP023529.1_3834907_3835465_-	PRK10078, PRK10078, ribose 1,5-bisphosphokinase; Provisional	NA|379aa|down_6|NZ_CP023529.1_3835461_3836598_-	PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional	NA|227aa|down_7|NZ_CP023529.1_3836594_3837275_-	COG4778, PhnL, ABC-type phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|252aa|down_8|NZ_CP023529.1_3837284_3838040_-	PRK11701, phnK, phosphonate C-P lyase system protein PhnK; Provisional	NA|282aa|down_9|NZ_CP023529.1_3838036_3838882_-	COG3627, PhnJ, Uncharacterized enzyme of phosphonate metabolism [Inorganic ion transport and metabolism]
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	9	3984908-3984971	9	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	CCCTCTGCTTGTGGTGGAGAGAA	23	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA|231aa|down_2|NZ_CP023529.1_3990021_3990714_+	NA|373aa|up_9|NZ_CP023529.1_3968375_3969494_+	TIGR01437, selA_rel, uncharacterized pyridoxal phosphate-dependent enzyme	NA|247aa|up_8|NZ_CP023529.1_3969490_3970231_+	TIGR03581, EF_0839, conserved hypothetical protein EF_0839/AHA_3917	NA|382aa|up_7|NZ_CP023529.1_3970547_3971693_+	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller	NA|637aa|up_6|NZ_CP023529.1_3971712_3973623_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|155aa|up_5|NZ_CP023529.1_3973656_3974121_-	PRK11121, nrdG, anaerobic ribonucleoside-triphosphate reductase-activating protein	NA|713aa|up_4|NZ_CP023529.1_3974427_3976566_-	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|552aa|up_3|NZ_CP023529.1_3976941_3978597_-	PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional	NA|473aa|up_2|NZ_CP023529.1_3978648_3980067_-	PRK11007, PRK11007, PTS system trehalose(maltose)-specific transporter subunits IIBC; Provisional	NA|316aa|up_1|NZ_CP023529.1_3980311_3981259_-	PRK09492, treR, HTH-type transcriptional regulator TreR	NA|903aa|up_0|NZ_CP023529.1_3981890_3984599_+	PRK10517, PRK10517, magnesium-transporting P-type ATPase MgtA	NA|795aa|down_0|NZ_CP023529.1_3985223_3987608_+	cd06570, GH20_chitobiase-like_1, A functionally uncharacterized subgroup of  the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin	NA|266aa|down_1|NZ_CP023529.1_3988570_3989368_+	sd00006, TPR, Tetratricopeptide repeat	NA|231aa|down_2|NZ_CP023529.1_3990021_3990714_+	NA	NA|160aa|down_3|NZ_CP023529.1_3990948_3991428_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|129aa|down_4|NZ_CP023529.1_3991545_3991932_-	PRK11401, PRK11401, enamine/imine deaminase	NA|154aa|down_5|NZ_CP023529.1_3992111_3992573_-	PRK00893, PRK00893, aspartate carbamoyltransferase regulatory subunit; Reviewed	NA|311aa|down_6|NZ_CP023529.1_3992585_3993518_-	COG0540, PyrB, Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism]	NA|35aa|down_7|NZ_CP023529.1_3993552_3993657_-	PRK10224, PRK10224, pyr operon leader peptide	NA|160aa|down_8|NZ_CP023529.1_3993757_3994237_-	COG1438, ArgR, Arginine repressor [Transcription]	NA|468aa|down_9|NZ_CP023529.1_3994320_3995724_-	COG1288, COG1288, Predicted membrane protein [Function unknown]
GCF_002393405.1_ASM239340v1	NZ_CP023529	Lelliottia amnigena strain FDAARGOS_395 chromosome, complete genome	10	4227893-4228028	10	CRISPRCasFinder	no		DinG,cas3,csa3,DEDDh,WYL	Orphan	CTGATGCCCTCACCCTGGCCCTCTCCCGCGGGAGAGGGAACAG	43	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,csa3,DEDDh,WYL	NA,NA	NA|475aa|up_9|NZ_CP023529.1_4215659_4217084_+	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed	NA|244aa|up_8|NZ_CP023529.1_4217279_4218011_+	PRK13731, PRK13731, complement resistance protein TraT	NA|265aa|up_7|NZ_CP023529.1_4218076_4218871_-	pfam11453, DUF2950, Protein of unknown function (DUF2950)	NA|518aa|up_6|NZ_CP023529.1_4218881_4220435_-	pfam11737, DUF3300, Protein of unknown function (DUF3300)	NA|866aa|up_5|NZ_CP023529.1_4220850_4223448_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|121aa|up_4|NZ_CP023529.1_4223638_4224001_+	PRK05248, PRK05248, hypothetical protein; Provisional	NA|265aa|up_3|NZ_CP023529.1_4224032_4224827_-	PRK05462, PRK05462, adenosylmethionine decarboxylase	NA|290aa|up_2|NZ_CP023529.1_4224828_4225698_-	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|116aa|up_1|NZ_CP023529.1_4225814_4226162_-	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS)	NA|525aa|up_0|NZ_CP023529.1_4226306_4227881_+	PRK10965, PRK10965, multicopper oxidase; Provisional	NA|797aa|down_0|NZ_CP023529.1_4228064_4230455_-	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|179aa|down_1|NZ_CP023529.1_4230661_4231198_+	PRK15423, PRK15423, hypoxanthine phosphoribosyltransferase; Provisional	NA|221aa|down_2|NZ_CP023529.1_4231241_4231904_-	PRK10437, PRK10437, carbonic anhydrase; Provisional	NA|309aa|down_3|NZ_CP023529.1_4232011_4232938_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|257aa|down_4|NZ_CP023529.1_4232934_4233705_+	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|147aa|down_5|NZ_CP023529.1_4233812_4234253_+	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|416aa|down_6|NZ_CP023529.1_4234315_4235563_+	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins	NA|127aa|down_7|NZ_CP023529.1_4235564_4235945_-	PRK05449, PRK05449, aspartate alpha-decarboxylase; Provisional	NA|285aa|down_8|NZ_CP023529.1_4236056_4236911_-	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|264aa|down_9|NZ_CP023529.1_4236922_4237714_-	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed
