assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	1	37794-37946	1	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	CTCCTGACTTCTGACTCCTGACTCCTGACT	30	1	202	37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916|37898-37916	NZ_AP018281.1_180944-180962|NZ_AP018281.1_180986-181004|NZ_AP018281.1_181063-181081|NZ_AP018281.1_157084-157066|NZ_AP018281.1_157098-157080|NZ_AP018281.1_359777-359759|NZ_AP018281.1_2405326-2405308|NZ_AP018281.1_37933-37951|NZ_AP018281.1_37940-37958|NZ_AP018281.1_37947-37965|NZ_AP018281.1_178428-178446|NZ_AP018281.1_181000-181018|NZ_AP018281.1_181042-181060|NZ_AP018281.1_181077-181095|NZ_AP018281.1_184951-184969|NZ_AP018281.1_184958-184976|NZ_AP018281.1_212142-212160|NZ_AP018281.1_287186-287204|NZ_AP018281.1_304132-304150|NZ_AP018281.1_382437-382455|NZ_AP018281.1_382479-382497|NZ_AP018281.1_395265-395283|NZ_AP018281.1_560966-560984|NZ_AP018281.1_604017-604035|NZ_AP018281.1_707799-707817|NZ_AP018281.1_707916-707934|NZ_AP018281.1_707923-707941|NZ_AP018281.1_746870-746888|NZ_AP018281.1_910051-910069|NZ_AP018281.1_910058-910076|NZ_AP018281.1_910065-910083|NZ_AP018281.1_912117-912135|NZ_AP018281.1_912124-912142|NZ_AP018281.1_912131-912149|NZ_AP018281.1_1302124-1302142|NZ_AP018281.1_1302131-1302149|NZ_AP018281.1_1303474-1303492|NZ_AP018281.1_1306951-1306969|NZ_AP018281.1_1380876-1380894|NZ_AP018281.1_1624213-1624231|NZ_AP018281.1_1624220-1624238|NZ_AP018281.1_1712944-1712962|NZ_AP018281.1_1712958-1712976|NZ_AP018281.1_1713100-1713118|NZ_AP018281.1_1713114-1713132|NZ_AP018281.1_1713256-1713274|NZ_AP018281.1_1713270-1713288|NZ_AP018281.1_1713412-1713430|NZ_AP018281.1_1713433-1713451|NZ_AP018281.1_1831622-1831640|NZ_AP018281.1_1831629-1831647|NZ_AP018281.1_1831636-1831654|NZ_AP018281.1_1838855-1838873|NZ_AP018281.1_1849691-1849709|NZ_AP018281.1_1849698-1849716|NZ_AP018281.1_1849705-1849723|NZ_AP018281.1_1967623-1967641|NZ_AP018281.1_1967630-1967648|NZ_AP018281.1_2293420-2293438|NZ_AP018281.1_2839281-2839299|NZ_AP018281.1_2839288-2839306|NZ_AP018281.1_2927822-2927840|NZ_AP018281.1_2927871-2927889|NZ_AP018281.1_2927878-2927896|NZ_AP018281.1_2990517-2990535|NZ_AP018281.1_3006220-3006238|NZ_AP018281.1_3006227-3006245|NZ_AP018281.1_3006234-3006252|NZ_AP018281.1_3006241-3006259|NZ_AP018281.1_3006248-3006266|NZ_AP018281.1_3006255-3006273|NZ_AP018281.1_3065618-3065636|NZ_AP018281.1_3065632-3065650|NZ_AP018281.1_3116234-3116252|NZ_AP018281.1_3116241-3116259|NZ_AP018281.1_3116314-3116332|NZ_AP018281.1_3116321-3116339|NZ_AP018281.1_3116328-3116346|NZ_AP018281.1_3469702-3469720|NZ_AP018281.1_3469709-3469727|NZ_AP018281.1_3469716-3469734|NZ_AP018281.1_3469723-3469741|NZ_AP018281.1_3469730-3469748|NZ_AP018281.1_3469737-3469755|NZ_AP018281.1_3469744-3469762|NZ_AP018281.1_3469751-3469769|NZ_AP018281.1_3498534-3498552|NZ_AP018281.1_3498541-3498559|NZ_AP018281.1_3646040-3646058|NZ_AP018281.1_3777984-3778002|NZ_AP018281.1_3781378-3781396|NZ_AP018281.1_3911557-3911575|NZ_AP018281.1_3911591-3911609|NZ_AP018281.1_3918461-3918479|NZ_AP018281.1_3918468-3918486|NZ_AP018281.1_3918475-3918493|NZ_AP018281.1_3918482-3918500|NZ_AP018281.1_3961597-3961615|NZ_AP018281.1_4067844-4067862|NZ_AP018281.1_4067851-4067869|NZ_AP018281.1_4184833-4184851|NZ_AP018281.1_4184840-4184858|NZ_AP018281.1_4184847-4184865|NZ_AP018281.1_4379953-4379971|NZ_AP018281.1_157070-157052|NZ_AP018281.1_359756-359738|NZ_AP018281.1_359763-359745|NZ_AP018281.1_424526-424508|NZ_AP018281.1_566509-566491|NZ_AP018281.1_690251-690233|NZ_AP018281.1_934210-934192|NZ_AP018281.1_934217-934199|NZ_AP018281.1_934224-934206|NZ_AP018281.1_1397570-1397552|NZ_AP018281.1_1397577-1397559|NZ_AP018281.1_1397584-1397566|NZ_AP018281.1_1561796-1561778|NZ_AP018281.1_1561803-1561785|NZ_AP018281.1_1757729-1757711|NZ_AP018281.1_1757736-1757718|NZ_AP018281.1_1757743-1757725|NZ_AP018281.1_2014263-2014245|NZ_AP018281.1_2519753-2519735|NZ_AP018281.1_2519760-2519742|NZ_AP018281.1_2572191-2572173|NZ_AP018281.1_2846484-2846466|NZ_AP018281.1_2846491-2846473|NZ_AP018281.1_2846498-2846480|NZ_AP018281.1_2855030-2855012|NZ_AP018281.1_3172196-3172178|NZ_AP018281.1_3177416-3177398|NZ_AP018281.1_3653655-3653637|NZ_AP018281.1_3653662-3653644|NZ_AP018281.1_3653669-3653651|NZ_AP018281.1_3701424-3701406|NZ_AP018281.1_3701431-3701413|NZ_AP018281.1_3823226-3823208|NZ_AP018281.1_3951877-3951859|NZ_AP018281.1_4053281-4053263|NZ_AP018281.1_178421-178439|NZ_AP018281.1_181014-181032|NZ_AP018281.1_181056-181074|NZ_AP018281.1_287034-287052|NZ_AP018281.1_320611-320629|NZ_AP018281.1_320625-320643|NZ_AP018281.1_320639-320657|NZ_AP018281.1_320646-320664|NZ_AP018281.1_395258-395276|NZ_AP018281.1_523184-523202|NZ_AP018281.1_523191-523209|NZ_AP018281.1_560980-560998|NZ_AP018281.1_560987-561005|NZ_AP018281.1_829142-829160|NZ_AP018281.1_1198958-1198976|NZ_AP018281.1_1303460-1303478|NZ_AP018281.1_1303467-1303485|NZ_AP018281.1_1380869-1380887|NZ_AP018281.1_1380883-1380901|NZ_AP018281.1_1380890-1380908|NZ_AP018281.1_1384838-1384856|NZ_AP018281.1_1384845-1384863|NZ_AP018281.1_1384908-1384926|NZ_AP018281.1_1399733-1399751|NZ_AP018281.1_1598471-1598489|NZ_AP018281.1_1712930-1712948|NZ_AP018281.1_1713093-1713111|NZ_AP018281.1_1713249-1713267|NZ_AP018281.1_1713405-1713423|NZ_AP018281.1_1713426-1713444|NZ_AP018281.1_1849740-1849758|NZ_AP018281.1_2232671-2232689|NZ_AP018281.1_2232685-2232703|NZ_AP018281.1_2293413-2293431|NZ_AP018281.1_2927787-2927805|NZ_AP018281.1_2927815-2927833|NZ_AP018281.1_2927836-2927854|NZ_AP018281.1_2927843-2927861|NZ_AP018281.1_2927857-2927875|NZ_AP018281.1_2927864-2927882|NZ_AP018281.1_3006213-3006231|NZ_AP018281.1_3469688-3469706|NZ_AP018281.1_3469695-3469713|NZ_AP018281.1_3631609-3631627|NZ_AP018281.1_4262282-4262300|NZ_AP018281.1_157105-157087|NZ_AP018281.1_359742-359724|NZ_AP018281.1_359784-359766|NZ_AP018281.1_359791-359773|NZ_AP018281.1_566429-566411|NZ_AP018281.1_934137-934119|NZ_AP018281.1_1079402-1079384|NZ_AP018281.1_1079451-1079433|NZ_AP018281.1_1206886-1206868|NZ_AP018281.1_1206960-1206942|NZ_AP018281.1_1990286-1990268|NZ_AP018281.1_2129322-2129304|NZ_AP018281.1_2405312-2405294|NZ_AP018281.1_2883362-2883344|NZ_AP018281.1_2902941-2902923|NZ_AP018281.1_3172268-3172250|NZ_AP018281.1_3478788-3478770|NZ_AP018281.1_4421142-4421124	NA	2	2	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|125aa|up_5|NZ_AP018281.1_31993_32368_+,NA|136aa|up_1|NZ_AP018281.1_36785_37193_+,NA|63aa|down_7|NZ_AP018281.1_47712_47901_-	NA|328aa|up_9|NZ_AP018281.1_24087_25071_-	PRK09283, PRK09283, porphobilinogen synthase	NA|346aa|up_8|NZ_AP018281.1_26041_27079_+	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|431aa|up_7|NZ_AP018281.1_27424_28717_+	PRK00077, eno, enolase; Provisional	NA|832aa|up_6|NZ_AP018281.1_29222_31718_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|125aa|up_5|NZ_AP018281.1_31993_32368_+	NA	NA|807aa|up_4|NZ_AP018281.1_32409_34830_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|48aa|up_3|NZ_AP018281.1_34999_35143_+	PLN00014, PLN00014, light-harvesting-like protein 3; Provisional	NA|382aa|up_2|NZ_AP018281.1_35387_36533_+	cd06451, AGAT_like, Alanine-glyoxylate aminotransferase (AGAT) family	NA|136aa|up_1|NZ_AP018281.1_36785_37193_+	NA	NA|159aa|up_0|NZ_AP018281.1_37210_37687_+	PRK01617, PRK01617, hypothetical protein; Provisional	NA|119aa|down_0|NZ_AP018281.1_38056_38413_+	PRK07459, PRK07459, single-stranded DNA-binding protein; Provisional	NA|532aa|down_1|NZ_AP018281.1_38545_40141_+	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|381aa|down_2|NZ_AP018281.1_40290_41433_+	cd03804, GT4_WbaZ-like, mannosyltransferase WbaZ and similar proteins	NA|243aa|down_3|NZ_AP018281.1_41528_42257_+	pfam02397, Bac_transf, Bacterial sugar transferase	NA|357aa|down_4|NZ_AP018281.1_42414_43485_+	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|312aa|down_5|NZ_AP018281.1_43511_44447_+	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|1024aa|down_6|NZ_AP018281.1_44521_47593_-	pfam00311, PEPcase, Phosphoenolpyruvate carboxylase	NA|63aa|down_7|NZ_AP018281.1_47712_47901_-	NA	NA|265aa|down_8|NZ_AP018281.1_48061_48856_+	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|170aa|down_9|NZ_AP018281.1_48884_49394_-	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	2	83132-83212	2	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	ACTACCTACATTGTCCCCTTGTGGGATT	28	1	248	83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184|83160-83184	NZ_AP018281.1_160953-160977|NZ_AP018281.1_160960-160984|NZ_AP018281.1_184878-184902|NZ_AP018281.1_184885-184909|NZ_AP018281.1_401310-401334|NZ_AP018281.1_410157-410181|NZ_AP018281.1_410164-410188|NZ_AP018281.1_410242-410266|NZ_AP018281.1_410249-410273|NZ_AP018281.1_410256-410280|NZ_AP018281.1_410263-410287|NZ_AP018281.1_418373-418397|NZ_AP018281.1_418380-418404|NZ_AP018281.1_463117-463141|NZ_AP018281.1_603978-604002|NZ_AP018281.1_603985-604009|NZ_AP018281.1_651944-651968|NZ_AP018281.1_651951-651975|NZ_AP018281.1_651958-651982|NZ_AP018281.1_651965-651989|NZ_AP018281.1_824229-824253|NZ_AP018281.1_838258-838234|NZ_AP018281.1_1063668-1063692|NZ_AP018281.1_1111559-1111535|NZ_AP018281.1_1111566-1111542|NZ_AP018281.1_1111573-1111549|NZ_AP018281.1_1155711-1155687|NZ_AP018281.1_1299851-1299875|NZ_AP018281.1_1352171-1352147|NZ_AP018281.1_1686589-1686565|NZ_AP018281.1_1699085-1699061|NZ_AP018281.1_1871597-1871621|NZ_AP018281.1_2017222-2017198|NZ_AP018281.1_2071160-2071136|NZ_AP018281.1_2071256-2071232|NZ_AP018281.1_2071263-2071239|NZ_AP018281.1_2074266-2074290|NZ_AP018281.1_2080232-2080256|NZ_AP018281.1_2080388-2080412|NZ_AP018281.1_2169115-2169139|NZ_AP018281.1_2169122-2169146|NZ_AP018281.1_2169129-2169153|NZ_AP018281.1_2169136-2169160|NZ_AP018281.1_2322230-2322254|NZ_AP018281.1_2322237-2322261|NZ_AP018281.1_2464591-2464615|NZ_AP018281.1_2464598-2464622|NZ_AP018281.1_2464605-2464629|NZ_AP018281.1_2488078-2488054|NZ_AP018281.1_2496869-2496893|NZ_AP018281.1_2632192-2632216|NZ_AP018281.1_2666311-2666287|NZ_AP018281.1_2669015-2669039|NZ_AP018281.1_2669066-2669090|NZ_AP018281.1_2712841-2712865|NZ_AP018281.1_2712848-2712872|NZ_AP018281.1_2712855-2712879|NZ_AP018281.1_2712862-2712886|NZ_AP018281.1_2712869-2712893|NZ_AP018281.1_2712876-2712900|NZ_AP018281.1_2712883-2712907|NZ_AP018281.1_2802148-2802124|NZ_AP018281.1_2925008-2925032|NZ_AP018281.1_2946270-2946294|NZ_AP018281.1_2946277-2946301|NZ_AP018281.1_2946284-2946308|NZ_AP018281.1_3151457-3151433|NZ_AP018281.1_3173986-3173962|NZ_AP018281.1_3248898-3248922|NZ_AP018281.1_3263816-3263792|NZ_AP018281.1_3263823-3263799|NZ_AP018281.1_3263830-3263806|NZ_AP018281.1_3465550-3465526|NZ_AP018281.1_3589117-3589093|NZ_AP018281.1_3625022-3625046|NZ_AP018281.1_3640272-3640296|NZ_AP018281.1_3640279-3640303|NZ_AP018281.1_3701386-3701362|NZ_AP018281.1_3724473-3724449|NZ_AP018281.1_3724480-3724456|NZ_AP018281.1_3724487-3724463|NZ_AP018281.1_3724494-3724470|NZ_AP018281.1_3724501-3724477|NZ_AP018281.1_3724508-3724484|NZ_AP018281.1_3724543-3724519|NZ_AP018281.1_3930883-3930907|NZ_AP018281.1_3930890-3930914|NZ_AP018281.1_3930897-3930921|NZ_AP018281.1_3946439-3946415|NZ_AP018281.1_4379977-4380001|NZ_AP018281.1_4379984-4380008|NZ_AP018281.1_4379991-4380015|NZ_AP018281.1_140665-140689|NZ_AP018281.1_160867-160891|NZ_AP018281.1_160874-160898|NZ_AP018281.1_160967-160991|NZ_AP018281.1_160974-160998|NZ_AP018281.1_160981-161005|NZ_AP018281.1_184899-184923|NZ_AP018281.1_283953-283977|NZ_AP018281.1_283988-284012|NZ_AP018281.1_316414-316438|NZ_AP018281.1_359820-359796|NZ_AP018281.1_372777-372753|NZ_AP018281.1_410171-410195|NZ_AP018281.1_410270-410294|NZ_AP018281.1_437350-437374|NZ_AP018281.1_437357-437381|NZ_AP018281.1_447579-447555|NZ_AP018281.1_491037-491061|NZ_AP018281.1_491044-491068|NZ_AP018281.1_503780-503756|NZ_AP018281.1_560797-560821|NZ_AP018281.1_683135-683111|NZ_AP018281.1_1111580-1111556|NZ_AP018281.1_1148270-1148294|NZ_AP018281.1_1185600-1185624|NZ_AP018281.1_1296795-1296771|NZ_AP018281.1_1647513-1647537|NZ_AP018281.1_1673271-1673247|NZ_AP018281.1_1673278-1673254|NZ_AP018281.1_1699064-1699040|NZ_AP018281.1_1699071-1699047|NZ_AP018281.1_1699078-1699054|NZ_AP018281.1_1749237-1749213|NZ_AP018281.1_1797320-1797296|NZ_AP018281.1_1990308-1990284|NZ_AP018281.1_2013170-2013146|NZ_AP018281.1_2032482-2032458|NZ_AP018281.1_2071167-2071143|NZ_AP018281.1_2074224-2074248|NZ_AP018281.1_2074259-2074283|NZ_AP018281.1_2074273-2074297|NZ_AP018281.1_2080381-2080405|NZ_AP018281.1_2093696-2093720|NZ_AP018281.1_2093703-2093727|NZ_AP018281.1_2093941-2093965|NZ_AP018281.1_2093948-2093972|NZ_AP018281.1_2322251-2322275|NZ_AP018281.1_2322258-2322282|NZ_AP018281.1_2464584-2464608|NZ_AP018281.1_2488050-2488026|NZ_AP018281.1_2488071-2488047|NZ_AP018281.1_2496876-2496900|NZ_AP018281.1_2496883-2496907|NZ_AP018281.1_2555844-2555820|NZ_AP018281.1_2579199-2579223|NZ_AP018281.1_2632150-2632174|NZ_AP018281.1_2632164-2632188|NZ_AP018281.1_2632178-2632202|NZ_AP018281.1_2632185-2632209|NZ_AP018281.1_2632199-2632223|NZ_AP018281.1_2669073-2669097|NZ_AP018281.1_2925022-2925046|NZ_AP018281.1_2946291-2946315|NZ_AP018281.1_3173993-3173969|NZ_AP018281.1_3203993-3203969|NZ_AP018281.1_3204000-3203976|NZ_AP018281.1_3204007-3203983|NZ_AP018281.1_3248905-3248929|NZ_AP018281.1_3263809-3263785|NZ_AP018281.1_3623646-3623670|NZ_AP018281.1_3640286-3640310|NZ_AP018281.1_3648996-3648972|NZ_AP018281.1_3649003-3648979|NZ_AP018281.1_3701393-3701369|NZ_AP018281.1_3724466-3724442|NZ_AP018281.1_3724515-3724491|NZ_AP018281.1_3724536-3724512|NZ_AP018281.1_3785391-3785367|NZ_AP018281.1_3907852-3907876|NZ_AP018281.1_3918422-3918446|NZ_AP018281.1_3918429-3918453|NZ_AP018281.1_3918436-3918460|NZ_AP018281.1_3946446-3946422|NZ_AP018281.1_4465071-4465047|NZ_AP018281.1_160853-160877|NZ_AP018281.1_160860-160884|NZ_AP018281.1_160932-160956|NZ_AP018281.1_160939-160963|NZ_AP018281.1_160946-160970|NZ_AP018281.1_372756-372732|NZ_AP018281.1_372763-372739|NZ_AP018281.1_382376-382400|NZ_AP018281.1_395372-395396|NZ_AP018281.1_395386-395410|NZ_AP018281.1_406666-406690|NZ_AP018281.1_437315-437339|NZ_AP018281.1_437329-437353|NZ_AP018281.1_437343-437367|NZ_AP018281.1_463110-463134|NZ_AP018281.1_503787-503763|NZ_AP018281.1_560804-560828|NZ_AP018281.1_570865-570889|NZ_AP018281.1_570879-570903|NZ_AP018281.1_651972-651996|NZ_AP018281.1_805020-804996|NZ_AP018281.1_956830-956806|NZ_AP018281.1_1063675-1063699|NZ_AP018281.1_1148263-1148287|NZ_AP018281.1_1198524-1198500|NZ_AP018281.1_1198594-1198570|NZ_AP018281.1_1216961-1216937|NZ_AP018281.1_1634813-1634789|NZ_AP018281.1_1661295-1661319|NZ_AP018281.1_1661302-1661326|NZ_AP018281.1_1797306-1797282|NZ_AP018281.1_1797313-1797289|NZ_AP018281.1_1797327-1797303|NZ_AP018281.1_1801314-1801338|NZ_AP018281.1_1831528-1831552|NZ_AP018281.1_1843814-1843790|NZ_AP018281.1_1843821-1843797|NZ_AP018281.1_1908613-1908637|NZ_AP018281.1_2013184-2013160|NZ_AP018281.1_2093781-2093805|NZ_AP018281.1_2093865-2093889|NZ_AP018281.1_2093872-2093896|NZ_AP018281.1_2108307-2108331|NZ_AP018281.1_2169108-2169132|NZ_AP018281.1_2322216-2322240|NZ_AP018281.1_2322223-2322247|NZ_AP018281.1_2464577-2464601|NZ_AP018281.1_2464626-2464650|NZ_AP018281.1_2488057-2488033|NZ_AP018281.1_2488064-2488040|NZ_AP018281.1_2632157-2632181|NZ_AP018281.1_2632171-2632195|NZ_AP018281.1_2669008-2669032|NZ_AP018281.1_2904876-2904900|NZ_AP018281.1_2925079-2925103|NZ_AP018281.1_3158371-3158347|NZ_AP018281.1_3158385-3158361|NZ_AP018281.1_3248912-3248936|NZ_AP018281.1_3248919-3248943|NZ_AP018281.1_3263795-3263771|NZ_AP018281.1_3263802-3263778|NZ_AP018281.1_3290156-3290180|NZ_AP018281.1_3648982-3648958|NZ_AP018281.1_3724522-3724498|NZ_AP018281.1_3724529-3724505|NZ_AP018281.1_3724550-3724526|NZ_AP018281.1_3784095-3784119|NZ_AP018281.1_4045894-4045918|NZ_AP018281.1_4380090-4380114|NZ_AP018281.1_4380097-4380121|NZ_AP018281.1_4431787-4431763|NZ_AP018281.1_4431794-4431770	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|161aa|up_5|NZ_AP018281.1_78145_78628_-,NA|77aa|down_2|NZ_AP018281.1_86062_86293_-,NA|75aa|down_9|NZ_AP018281.1_92330_92555_+	NA|152aa|up_9|NZ_AP018281.1_74435_74891_-	pfam10847, DUF2656, Protein of unknown function (DUF2656)	NA|487aa|up_8|NZ_AP018281.1_74975_76436_+	TIGR04095, type_III_restriction_protein_res_subunit, DNA phosphorothioation system restriction enzyme	NA|164aa|up_7|NZ_AP018281.1_76454_76946_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|301aa|up_6|NZ_AP018281.1_77239_78142_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|161aa|up_5|NZ_AP018281.1_78145_78628_-	NA	NA|130aa|up_4|NZ_AP018281.1_78788_79178_-	COG1950, COG1950, Predicted membrane protein [Function unknown]	NA|60aa|up_3|NZ_AP018281.1_79448_79628_+	pfam01679, Pmp3, Proteolipid membrane potential modulator	NA|235aa|up_2|NZ_AP018281.1_79666_80371_-	COG2173, DdpX, D-alanyl-D-alanine dipeptidase [Cell envelope biogenesis, outer membrane]	NA|495aa|up_1|NZ_AP018281.1_80662_82147_-	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed	NA|200aa|up_0|NZ_AP018281.1_82347_82947_-	COG4420, COG4420, Predicted membrane protein [Function unknown]	NA|359aa|down_0|NZ_AP018281.1_83371_84448_-	pfam04087, DUF389, Domain of unknown function (DUF389)	NA|391aa|down_1|NZ_AP018281.1_84554_85727_-	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]	NA|77aa|down_2|NZ_AP018281.1_86062_86293_-	NA	NA|356aa|down_3|NZ_AP018281.1_86470_87538_-	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only]	NA|109aa|down_4|NZ_AP018281.1_87661_87988_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|556aa|down_5|NZ_AP018281.1_88330_89998_+	pfam09852, DUF2079, Predicted membrane protein (DUF2079)	NA|185aa|down_6|NZ_AP018281.1_90224_90779_+	pfam11181, YflT, Heat induced stress protein YflT	NA|203aa|down_7|NZ_AP018281.1_90861_91470_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|72aa|down_8|NZ_AP018281.1_92027_92243_+	pfam07862, Nif11, Nif11 domain	NA|75aa|down_9|NZ_AP018281.1_92330_92555_+	NA
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	3	109182-109340	3	CRISPRCasFinder	no	cas14j	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Unclear	CTCCTGACTCCTGACTTCTTGGTGCA	26	2	15	109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109208-109248|109275-109314|109275-109314|109275-109314	NZ_AP018281.1_180901-180941|NZ_AP018281.1_1561764-1561724|NZ_AP018281.1_1757786-1757746|NZ_AP018281.1_471724-471764|NZ_AP018281.1_1598428-1598468|NZ_AP018281.1_1624080-1624120|NZ_AP018281.1_3501834-3501874|NZ_AP018281.1_3669272-3669312|NZ_AP018281.1_1217227-1217187|NZ_AP018281.1_971858-971898|NZ_AP018281.1_1821521-1821561|NZ_AP018281.1_3783952-3783992|NZ_AP018281.1_934179-934140|NZ_AP018281.1_2014232-2014193|NZ_AP018281.1_566478-566439	NA	2	2	TypeV	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|428aa|up_3|NZ_AP018281.1_105421_106705_-,NA|79aa|up_1|NZ_AP018281.1_107981_108218_-,NA	NA|261aa|up_9|NZ_AP018281.1_98367_99150_-	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation	NA|142aa|up_8|NZ_AP018281.1_100673_101099_-	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|265aa|up_7|NZ_AP018281.1_101106_101901_-	COG0695, GrxC, Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]	cas14j|462aa|up_6|NZ_AP018281.1_101921_103307_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|137aa|up_5|NZ_AP018281.1_103353_103764_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|385aa|up_4|NZ_AP018281.1_104275_105430_+	pfam14907, NTP_transf_5, Uncharacterized nucleotidyltransferase	NA|428aa|up_3|NZ_AP018281.1_105421_106705_-	NA	NA|301aa|up_2|NZ_AP018281.1_106746_107649_-	cd01918, HprK_C, HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria	NA|79aa|up_1|NZ_AP018281.1_107981_108218_-	NA	NA|262aa|up_0|NZ_AP018281.1_108323_109109_-	pfam05096, Glu_cyclase_2, Glutamine cyclotransferase	NA|643aa|down_0|NZ_AP018281.1_109374_111303_-	cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type	NA|573aa|down_1|NZ_AP018281.1_111350_113069_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|306aa|down_2|NZ_AP018281.1_113253_114171_-	TIGR04352, hypothetical_protein_imdm_1353, HprK-related kinase A	NA|652aa|down_3|NZ_AP018281.1_114598_116554_-	cd00712, AsnB, Glutamine amidotransferases class-II (GATase) asparagine synthase_B type	NA|148aa|down_4|NZ_AP018281.1_116550_116994_-	pfam13471, Transglut_core3, Transglutaminase-like superfamily	NA|106aa|down_5|NZ_AP018281.1_116977_117295_-	pfam05402, PqqD, Coenzyme PQQ synthesis protein D (PqqD)	NA|754aa|down_6|NZ_AP018281.1_117657_119919_+	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|322aa|down_7|NZ_AP018281.1_120004_120970_+	pfam13578, Methyltransf_24, Methyltransferase domain	NA|449aa|down_8|NZ_AP018281.1_121063_122410_+	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|364aa|down_9|NZ_AP018281.1_122426_123518_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	4	153581-153684	4	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	ACATTGTCCCCTTGTGGGATTACT	24	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|78aa|up_5|NZ_AP018281.1_147118_147352_+,NA|103aa|up_4|NZ_AP018281.1_147355_147664_+,NA|92aa|up_1|NZ_AP018281.1_151893_152169_+,NA|432aa|up_0|NZ_AP018281.1_152176_153472_+,NA|222aa|down_0|NZ_AP018281.1_153716_154382_-	NA|425aa|up_9|NZ_AP018281.1_141816_143091_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|399aa|up_8|NZ_AP018281.1_143224_144421_+	PRK07366, PRK07366, LL-diaminopimelate aminotransferase	NA|201aa|up_7|NZ_AP018281.1_144433_145036_+	pfam05724, TPMT, Thiopurine S-methyltransferase (TPMT)	NA|500aa|up_6|NZ_AP018281.1_145152_146652_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|78aa|up_5|NZ_AP018281.1_147118_147352_+	NA	NA|103aa|up_4|NZ_AP018281.1_147355_147664_+	NA	NA|685aa|up_3|NZ_AP018281.1_148060_150115_-	PRK14948, PRK14948, DNA polymerase III subunit gamma/tau	NA|470aa|up_2|NZ_AP018281.1_150395_151805_+	sd00006, TPR, Tetratricopeptide repeat	NA|92aa|up_1|NZ_AP018281.1_151893_152169_+	NA	NA|432aa|up_0|NZ_AP018281.1_152176_153472_+	NA	NA|222aa|down_0|NZ_AP018281.1_153716_154382_-	NA	NA|675aa|down_1|NZ_AP018281.1_154861_156886_+	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|599aa|down_2|NZ_AP018281.1_157338_159135_+	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|511aa|down_3|NZ_AP018281.1_159146_160679_-	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|588aa|down_4|NZ_AP018281.1_161059_162823_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|835aa|down_5|NZ_AP018281.1_162896_165401_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|390aa|down_6|NZ_AP018281.1_166452_167622_+	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated	NA|239aa|down_7|NZ_AP018281.1_167817_168534_+	pfam01292, Ni_hydr_CYTB, Prokaryotic cytochrome b561	NA|604aa|down_8|NZ_AP018281.1_168715_170527_+	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|423aa|down_9|NZ_AP018281.1_170698_171967_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	5	219986-220067	5	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	CATTGTCCCCTTGTGGGATTACTCC	25	1	99	220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042|220011-220042	NZ_AP018281.1_140659-140690|NZ_AP018281.1_2322245-2322276|NZ_AP018281.1_2925016-2925047|NZ_AP018281.1_3649009-3648978|NZ_AP018281.1_3785397-3785366|NZ_AP018281.1_184879-184910|NZ_AP018281.1_372769-372738|NZ_AP018281.1_401304-401335|NZ_AP018281.1_410158-410189|NZ_AP018281.1_410243-410274|NZ_AP018281.1_410250-410281|NZ_AP018281.1_410257-410288|NZ_AP018281.1_418374-418405|NZ_AP018281.1_437323-437354|NZ_AP018281.1_437337-437368|NZ_AP018281.1_570873-570904|NZ_AP018281.1_603979-604010|NZ_AP018281.1_651945-651976|NZ_AP018281.1_651952-651983|NZ_AP018281.1_1111565-1111534|NZ_AP018281.1_1111572-1111541|NZ_AP018281.1_1831522-1831553|NZ_AP018281.1_1908607-1908638|NZ_AP018281.1_2071262-2071231|NZ_AP018281.1_2093935-2093966|NZ_AP018281.1_2169116-2169147|NZ_AP018281.1_2169123-2169154|NZ_AP018281.1_2169130-2169161|NZ_AP018281.1_2322231-2322262|NZ_AP018281.1_2464592-2464623|NZ_AP018281.1_2464599-2464630|NZ_AP018281.1_2464620-2464651|NZ_AP018281.1_2488084-2488053|NZ_AP018281.1_2712842-2712873|NZ_AP018281.1_2712849-2712880|NZ_AP018281.1_2712856-2712887|NZ_AP018281.1_2712863-2712894|NZ_AP018281.1_2712870-2712901|NZ_AP018281.1_2712877-2712908|NZ_AP018281.1_2946271-2946302|NZ_AP018281.1_3263822-3263791|NZ_AP018281.1_3263829-3263798|NZ_AP018281.1_3724486-3724455|NZ_AP018281.1_3724493-3724462|NZ_AP018281.1_3724500-3724469|NZ_AP018281.1_3724507-3724476|NZ_AP018281.1_3930877-3930908|NZ_AP018281.1_3930884-3930915|NZ_AP018281.1_3930891-3930922|NZ_AP018281.1_4045888-4045919|NZ_AP018281.1_4379978-4380009|NZ_AP018281.1_4379985-4380016|NZ_AP018281.1_4380084-4380115|NZ_AP018281.1_160868-160899|NZ_AP018281.1_160961-160992|NZ_AP018281.1_160968-160999|NZ_AP018281.1_160975-161006|NZ_AP018281.1_491038-491069|NZ_AP018281.1_707564-707533|NZ_AP018281.1_805026-804995|NZ_AP018281.1_1063662-1063693|NZ_AP018281.1_1111579-1111548|NZ_AP018281.1_1198530-1198499|NZ_AP018281.1_1198600-1198569|NZ_AP018281.1_1673277-1673246|NZ_AP018281.1_1699070-1699039|NZ_AP018281.1_1699077-1699046|NZ_AP018281.1_1699084-1699053|NZ_AP018281.1_1797284-1797253|NZ_AP018281.1_2032502-2032471|NZ_AP018281.1_2071166-2071135|NZ_AP018281.1_2071173-2071142|NZ_AP018281.1_2074267-2074298|NZ_AP018281.1_2080375-2080406|NZ_AP018281.1_2093942-2093973|NZ_AP018281.1_2322252-2322283|NZ_AP018281.1_2464585-2464616|NZ_AP018281.1_2488077-2488046|NZ_AP018281.1_2496870-2496901|NZ_AP018281.1_2496877-2496908|NZ_AP018281.1_2632179-2632210|NZ_AP018281.1_2632186-2632217|NZ_AP018281.1_2632193-2632224|NZ_AP018281.1_2669067-2669098|NZ_AP018281.1_2712835-2712866|NZ_AP018281.1_2925002-2925033|NZ_AP018281.1_2946285-2946316|NZ_AP018281.1_3203999-3203968|NZ_AP018281.1_3204006-3203975|NZ_AP018281.1_3263815-3263784|NZ_AP018281.1_3465556-3465525|NZ_AP018281.1_3640266-3640297|NZ_AP018281.1_3649002-3648971|NZ_AP018281.1_3701392-3701361|NZ_AP018281.1_3724472-3724441|NZ_AP018281.1_3724514-3724483|NZ_AP018281.1_3724542-3724511|NZ_AP018281.1_3918423-3918454|NZ_AP018281.1_3946445-3946414	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|469aa|up_5|NZ_AP018281.1_207728_209135_+,NA|71aa|down_4|NZ_AP018281.1_225786_225999_-,NA|92aa|down_5|NZ_AP018281.1_226415_226691_+,NA|69aa|down_8|NZ_AP018281.1_229896_230103_-,NA|256aa|down_9|NZ_AP018281.1_230251_231019_-	NA|556aa|up_9|NZ_AP018281.1_203246_204914_+	pfam04388, Hamartin, Hamartin protein	NA|253aa|up_8|NZ_AP018281.1_204958_205717_-	PRK00235, cobS, cobalamin synthase; Reviewed	NA|148aa|up_7|NZ_AP018281.1_205899_206343_+	pfam11316, Rhamno_transf, Putative rhamnosyl transferase	NA|371aa|up_6|NZ_AP018281.1_206385_207498_+	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|469aa|up_5|NZ_AP018281.1_207728_209135_+	NA	NA|853aa|up_4|NZ_AP018281.1_209332_211891_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|520aa|up_3|NZ_AP018281.1_212445_214005_+	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]	NA|952aa|up_2|NZ_AP018281.1_214083_216939_-	PRK12902, secA, preprotein translocase subunit SecA; Reviewed	NA|434aa|up_1|NZ_AP018281.1_217204_218506_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|438aa|up_0|NZ_AP018281.1_218545_219859_+	PRK11274, glcF, glycolate oxidase subunit GlcF	NA|454aa|down_0|NZ_AP018281.1_220250_221612_-	COG3429, COG3429, Glucose-6-P dehydrogenase subunit [Carbohydrate transport and metabolism]	NA|510aa|down_1|NZ_AP018281.1_221688_223218_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|382aa|down_2|NZ_AP018281.1_223376_224522_-	PRK03343, PRK03343, transaldolase; Validated	NA|354aa|down_3|NZ_AP018281.1_224577_225639_-	PRK09293, PRK09293, class 1 fructose-bisphosphatase	NA|71aa|down_4|NZ_AP018281.1_225786_225999_-	NA	NA|92aa|down_5|NZ_AP018281.1_226415_226691_+	NA	NA|524aa|down_6|NZ_AP018281.1_226941_228513_+	PRK09566, nirA, ferredoxin-nitrite reductase; Reviewed	NA|394aa|down_7|NZ_AP018281.1_228509_229691_-	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|69aa|down_8|NZ_AP018281.1_229896_230103_-	NA	NA|256aa|down_9|NZ_AP018281.1_230251_231019_-	NA
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	6	810971-811042	6	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	GGAGTCAGGAAGGGGGAGTCAGA	23	1	7	810994-811019|810994-811019|810994-811019|810994-811019|810994-811019|810994-811019|810994-811019	NZ_AP018281.1_2014243-2014268|NZ_AP018281.1_1561783-1561808|NZ_AP018281.1_184971-184946|NZ_AP018281.1_1306971-1306946|NZ_AP018281.1_1384928-1384903|NZ_AP018281.1_3911577-3911552|NZ_AP018281.1_3911611-3911586	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA,NA|152aa|down_7|NZ_AP018281.1_817441_817897_+,NA|67aa|down_8|NZ_AP018281.1_818415_818616_+,NA|87aa|down_9|NZ_AP018281.1_818615_818876_+	NA|317aa|up_9|NZ_AP018281.1_800063_801014_+	cd06251, M14_ASTE_ASPA-like, Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA)-like; uncharacterized subgroup	NA|426aa|up_8|NZ_AP018281.1_801024_802302_+	sd00006, TPR, Tetratricopeptide repeat	NA|306aa|up_7|NZ_AP018281.1_802630_803548_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|123aa|up_6|NZ_AP018281.1_803551_803920_-	pfam03912, Psb28, Psb28 protein	NA|38aa|up_5|NZ_AP018281.1_804190_804304_-	pfam08041, PetM, PetM family of cytochrome b6f complex subunit 7	NA|164aa|up_4|NZ_AP018281.1_804461_804953_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|120aa|up_3|NZ_AP018281.1_805126_805486_+	cd02977, ArsC_family, Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx	NA|219aa|up_2|NZ_AP018281.1_805818_806475_+	PRK10826, PRK10826, hexitol phosphatase HxpB	NA|316aa|up_1|NZ_AP018281.1_806477_807425_-	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|386aa|up_0|NZ_AP018281.1_807786_808944_+	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily	NA|337aa|down_0|NZ_AP018281.1_811128_812139_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|204aa|down_1|NZ_AP018281.1_812708_813320_-	TIGR00498, LexA_repressor	NA|90aa|down_2|NZ_AP018281.1_813598_813868_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|160aa|down_3|NZ_AP018281.1_813882_814362_+	pfam11947, DUF3464, Protein of unknown function (DUF3464)	NA|303aa|down_4|NZ_AP018281.1_814620_815529_+	cd01017, AdcA, Metal binding protein AdcA	NA|255aa|down_5|NZ_AP018281.1_815563_816328_+	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|272aa|down_6|NZ_AP018281.1_816296_817112_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|152aa|down_7|NZ_AP018281.1_817441_817897_+	NA	NA|67aa|down_8|NZ_AP018281.1_818415_818616_+	NA	NA|87aa|down_9|NZ_AP018281.1_818615_818876_+	NA
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	7	914848-914942	7	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	CTCATTGTCCCCTTGTGGGATTA	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|203aa|up_0|NZ_AP018281.1_914077_914686_-,NA|78aa|down_0|NZ_AP018281.1_915036_915270_+,NA|120aa|down_3|NZ_AP018281.1_918248_918608_+,NA|71aa|down_5|NZ_AP018281.1_920721_920934_-	NA|112aa|up_9|NZ_AP018281.1_905526_905862_+	TIGR04212, conserved_hypothetical_protein, Acinetobacter rhombotarget A	NA|362aa|up_8|NZ_AP018281.1_905996_907082_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|200aa|up_7|NZ_AP018281.1_907427_908027_+	pfam05685, Uma2, Putative restriction endonuclease	NA|539aa|up_6|NZ_AP018281.1_908145_909762_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|375aa|up_5|NZ_AP018281.1_910093_911218_-	pfam14258, DUF4350, Domain of unknown function (DUF4350)	NA|204aa|up_4|NZ_AP018281.1_911224_911836_-	pfam13559, DUF4129, Domain of unknown function (DUF4129)	NA|260aa|up_3|NZ_AP018281.1_912324_913104_+	COG1714, COG1714, Predicted membrane protein/domain [Function unknown]	NA|117aa|up_2|NZ_AP018281.1_913251_913602_-	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain	NA|105aa|up_1|NZ_AP018281.1_913728_914043_-	cd07057, BMC_CcmK, Carbon dioxide concentrating mechanism (CcmK); Bacterial Micro-Compartment (BMC) domain	NA|203aa|up_0|NZ_AP018281.1_914077_914686_-	NA	NA|78aa|down_0|NZ_AP018281.1_915036_915270_+	NA	NA|504aa|down_1|NZ_AP018281.1_915274_916786_-	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|244aa|down_2|NZ_AP018281.1_916985_917717_+	PRK00024, PRK00024, DNA repair protein RadC	NA|120aa|down_3|NZ_AP018281.1_918248_918608_+	NA	NA|683aa|down_4|NZ_AP018281.1_918620_920669_-	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|71aa|down_5|NZ_AP018281.1_920721_920934_-	NA	NA|97aa|down_6|NZ_AP018281.1_921013_921304_+	pfam02436, PYC_OADA, Conserved carboxylase domain	NA|765aa|down_7|NZ_AP018281.1_921496_923791_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|391aa|down_8|NZ_AP018281.1_924013_925186_-	COG1565, COG1565, Uncharacterized conserved protein [Function unknown]	NA|591aa|down_9|NZ_AP018281.1_925367_927140_+	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL)
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	8	1170717-1171010	1	CRT	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	NAGGTGGATCAATAACATTGTCGTCATCTANNNCNTCATCNN	42	1	1	1170855-1170872	NZ_AP018281.1_1875796-1875779	NA	5	5	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|97aa|up_9|NZ_AP018281.1_1157689_1157980_+,NA|190aa|down_9|NZ_AP018281.1_1183218_1183788_+	NA|97aa|up_9|NZ_AP018281.1_1157689_1157980_+	NA	NA|230aa|up_8|NZ_AP018281.1_1158007_1158697_-	PRK06277, PRK06277, energy conserving hydrogenase EhbF	NA|150aa|up_7|NZ_AP018281.1_1158969_1159419_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|484aa|up_6|NZ_AP018281.1_1159558_1161010_-	pfam04966, OprB, Carbohydrate-selective porin, OprB family	NA|380aa|up_5|NZ_AP018281.1_1161049_1162189_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|608aa|up_4|NZ_AP018281.1_1162432_1164256_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|342aa|up_3|NZ_AP018281.1_1164626_1165652_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|406aa|up_2|NZ_AP018281.1_1165683_1166901_-	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins	NA|385aa|up_1|NZ_AP018281.1_1167553_1168708_-	COG4671, COG4671, Predicted glycosyl transferase [General function prediction only]	NA|425aa|up_0|NZ_AP018281.1_1168755_1170030_-	COG4671, COG4671, Predicted glycosyl transferase [General function prediction only]	NA|225aa|down_0|NZ_AP018281.1_1171329_1172004_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|335aa|down_1|NZ_AP018281.1_1172242_1173247_+	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|160aa|down_2|NZ_AP018281.1_1173659_1174139_+	pfam13301, DUF4079, Protein of unknown function (DUF4079)	NA|977aa|down_3|NZ_AP018281.1_1174247_1177178_-	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|135aa|down_4|NZ_AP018281.1_1177467_1177872_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|323aa|down_5|NZ_AP018281.1_1178248_1179217_+	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA	NA|363aa|down_6|NZ_AP018281.1_1179685_1180774_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|518aa|down_7|NZ_AP018281.1_1180930_1182484_+	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|181aa|down_8|NZ_AP018281.1_1182569_1183112_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|190aa|down_9|NZ_AP018281.1_1183218_1183788_+	NA
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	9	1704105-1704216	8	CRISPRCasFinder	no	cas3	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Unclear	AATCCCACAAGGGGACAATGTAGGTAGTAGGTAGT	35	1	5	1704140-1704181|1704140-1704181|1704140-1704181|1704140-1704181|1704140-1704181	NZ_AP018281.1_907375-907334|NZ_AP018281.1_316311-316270|NZ_AP018281.1_560895-560854|NZ_AP018281.1_1104480-1104439|NZ_AP018281.1_1831618-1831577	NA	1	1	Unclear	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA,NA|755aa|down_2|NZ_AP018281.1_1705338_1707603_-	NA|398aa|up_9|NZ_AP018281.1_1693022_1694216_-	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]	NA|285aa|up_8|NZ_AP018281.1_1694370_1695225_+	pfam10025, DUF2267, Uncharacterized conserved protein (DUF2267)	NA|102aa|up_7|NZ_AP018281.1_1695592_1695898_+	COG5548, COG5548, Small integral membrane protein [Function unknown]	NA|222aa|up_6|NZ_AP018281.1_1696282_1696948_-	cd19365, TenA_C-like, uncharacterized TenA_C proteins	NA|117aa|up_5|NZ_AP018281.1_1697003_1697354_+	pfam06108, DUF952, Protein of unknown function (DUF952)	NA|141aa|up_4|NZ_AP018281.1_1697377_1697800_+	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|272aa|up_3|NZ_AP018281.1_1699184_1700000_-	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|175aa|up_2|NZ_AP018281.1_1700011_1700536_-	COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair]	NA|123aa|up_1|NZ_AP018281.1_1700635_1701004_-	PTZ00038, PTZ00038, ferredoxin; Provisional	NA|805aa|up_0|NZ_AP018281.1_1701599_1704014_-	COG4354, COG4354, Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	NA|168aa|down_0|NZ_AP018281.1_1704416_1704920_-	COG0576, GrpE, Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|119aa|down_1|NZ_AP018281.1_1704971_1705328_-	PRK10767, PRK10767, chaperone protein DnaJ; Provisional	NA|755aa|down_2|NZ_AP018281.1_1705338_1707603_-	NA	NA|180aa|down_3|NZ_AP018281.1_1707691_1708231_-	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional	NA|735aa|down_4|NZ_AP018281.1_1708310_1710515_-	cd10170, HSP70_NBD, Nucleotide-binding domain of the HSP70 family	NA|344aa|down_5|NZ_AP018281.1_1710745_1711777_-	COG3367, COG3367, Uncharacterized conserved protein [Function unknown]	NA|351aa|down_6|NZ_AP018281.1_1711763_1712816_-	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides	NA|117aa|down_7|NZ_AP018281.1_1713471_1713822_-	COG2146, {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only]	NA|293aa|down_8|NZ_AP018281.1_1713939_1714818_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|79aa|down_9|NZ_AP018281.1_1714937_1715174_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	10	1871643-1871728	9	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	TACTTACATTGTCCCCTTGTGGGATT	26	1	1	1871669-1871702	NZ_AP018281.1_2237994-2237961	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|63aa|up_0|NZ_AP018281.1_1871234_1871423_+,NA|68aa|down_0|NZ_AP018281.1_1871919_1872123_+	NA|462aa|up_9|NZ_AP018281.1_1858354_1859740_+	PRK13352, PRK13352, phosphomethylpyrimidine synthase ThiC	NA|392aa|up_8|NZ_AP018281.1_1859795_1860971_-	PRK09303, PRK09303, histidine kinase	NA|530aa|up_7|NZ_AP018281.1_1861262_1862852_+	COG1543, COG1543, Uncharacterized conserved protein [Function unknown]	NA|616aa|up_6|NZ_AP018281.1_1862891_1864739_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|230aa|up_5|NZ_AP018281.1_1865145_1865835_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|677aa|up_4|NZ_AP018281.1_1866102_1868133_-	PRK07376, PRK07376, NADH-quinone oxidoreductase subunit L	NA|237aa|up_3|NZ_AP018281.1_1868295_1869006_-	PRK09289, PRK09289, riboflavin synthase	NA|167aa|up_2|NZ_AP018281.1_1869267_1869768_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|376aa|up_1|NZ_AP018281.1_1869808_1870936_+	COG1453, COG1453, Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]	NA|63aa|up_0|NZ_AP018281.1_1871234_1871423_+	NA	NA|68aa|down_0|NZ_AP018281.1_1871919_1872123_+	NA	NA|360aa|down_1|NZ_AP018281.1_1872125_1873205_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|117aa|down_2|NZ_AP018281.1_1873307_1873658_-	cd01528, RHOD_2, Member of the Rhodanese Homology Domain superfamily, subgroup 2	NA|378aa|down_3|NZ_AP018281.1_1873858_1874992_+	pfam11832, DUF3352, Protein of unknown function (DUF3352)	NA|329aa|down_4|NZ_AP018281.1_1874988_1875975_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|456aa|down_5|NZ_AP018281.1_1876046_1877414_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|361aa|down_6|NZ_AP018281.1_1877799_1878882_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|471aa|down_7|NZ_AP018281.1_1878967_1880380_+	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]	NA|268aa|down_8|NZ_AP018281.1_1880384_1881188_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|479aa|down_9|NZ_AP018281.1_1881470_1882907_+	COG2203, FhlA, FOG: GAF domain [Signal transduction mechanisms]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	11	2172671-2180279	10,2,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas2,cas1,cas4,cas6,cas3,cas5,cas7,cas8b5,WYL	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Unclear	GTTTCAATTCCTCATAGGAATAATTGTTAGTTAAAAC,GTTTCAATTCCTCATAGGAATAATTGTTAGTTAAAAC,GTTTCAATTCCTCATAGGAATAATTGTTAGTTAAAAC,GTTTCAATTCCTCATAGGAATAATTGTTAGTTTAAAC,GTTTCAATTCCTCATAGGAATAATTGTTAGTTAAAAC	37,37,37,37,37	0	0	NA	NA	NA:NA:NA:NA:NA	103,103,98,98,98	103	Unclear	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|134aa|up_5|NZ_AP018281.1_2164823_2165225_+,NA|72aa|up_0|NZ_AP018281.1_2172428_2172644_+,cas7|290aa|down_6|NZ_AP018281.1_2186790_2187660_-,cas8b5|719aa|down_7|NZ_AP018281.1_2187659_2189816_-	NA|1640aa|up_9|NZ_AP018281.1_2152844_2157764_+	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs	NA|598aa|up_8|NZ_AP018281.1_2159642_2161436_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|598aa|up_7|NZ_AP018281.1_2161459_2163253_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|478aa|up_6|NZ_AP018281.1_2163332_2164766_+	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|134aa|up_5|NZ_AP018281.1_2164823_2165225_+	NA	NA|423aa|up_4|NZ_AP018281.1_2165369_2166638_+	TIGR02971, devB-like_secretion_protein, ABC exporter membrane fusion protein, DevB family	NA|391aa|up_3|NZ_AP018281.1_2166653_2167826_+	TIGR01185, membrane_spanning_subunit, DevC protein	NA|519aa|up_2|NZ_AP018281.1_2169192_2170749_-	pfam02517, Abi, CAAX protease self-immunity	NA|447aa|up_1|NZ_AP018281.1_2170890_2172231_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|72aa|up_0|NZ_AP018281.1_2172428_2172644_+	NA	cas2|92aa|down_0|NZ_AP018281.1_2180512_2180788_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|336aa|down_1|NZ_AP018281.1_2180791_2181799_-	TIGR04093, hypothetical_protein_L8106_25395, CRISPR-associated endonuclease Cas1, subtype CYANO	cas4|198aa|down_2|NZ_AP018281.1_2181817_2182411_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas6|274aa|down_3|NZ_AP018281.1_2182413_2183235_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas3|911aa|down_4|NZ_AP018281.1_2183249_2185982_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|271aa|down_5|NZ_AP018281.1_2185974_2186787_-	COG1688, COG1688, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	cas7|290aa|down_6|NZ_AP018281.1_2186790_2187660_-	NA	cas8b5|719aa|down_7|NZ_AP018281.1_2187659_2189816_-	NA	WYL|285aa|down_8|NZ_AP018281.1_2190197_2191052_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|145aa|down_9|NZ_AP018281.1_2191172_2191607_-	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	12	2319105-2319200	11	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	GTAGCAATAGTTTTAGAGTTTTTTCAATT	29	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA,NA|81aa|down_0|NZ_AP018281.1_2319255_2319498_+	NA|204aa|up_9|NZ_AP018281.1_2308970_2309582_+	TIGR00403, NADPH-quinone_oxidoreductase_subunit_I, NADH-plastoquinone oxidoreductase subunit I protein	NA|207aa|up_8|NZ_AP018281.1_2309622_2310243_+	CHL00016, ndhG, NADH dehydrogenase subunit 6	NA|102aa|up_7|NZ_AP018281.1_2310436_2310742_+	CHL00015, ndhE, NADH dehydrogenase subunit 4L	NA|430aa|up_6|NZ_AP018281.1_2310888_2312178_+	pfam12565, DUF3747, Protein of unknown function (DUF3747)	NA|390aa|up_5|NZ_AP018281.1_2312782_2313952_+	cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1	NA|197aa|up_4|NZ_AP018281.1_2314108_2314699_-	pfam02342, TerD, TerD domain	NA|192aa|up_3|NZ_AP018281.1_2314719_2315295_-	pfam02342, TerD, TerD domain	NA|192aa|up_2|NZ_AP018281.1_2315403_2315979_-	pfam02342, TerD, TerD domain	NA|551aa|up_1|NZ_AP018281.1_2316131_2317784_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|365aa|up_0|NZ_AP018281.1_2317959_2319054_+	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|81aa|down_0|NZ_AP018281.1_2319255_2319498_+	NA	NA|293aa|down_1|NZ_AP018281.1_2319504_2320383_-	cd00293, USP_Like, Usp: Universal stress protein family	NA|65aa|down_2|NZ_AP018281.1_2320549_2320744_-	pfam04485, NblA, Phycobilisome degradation protein nblA	NA|160aa|down_3|NZ_AP018281.1_2321355_2321835_+	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins	NA|234aa|down_4|NZ_AP018281.1_2322426_2323128_+	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|116aa|down_5|NZ_AP018281.1_2323354_2323702_+	PRK13697, PRK13697, cytochrome c6; Provisional	NA|383aa|down_6|NZ_AP018281.1_2323783_2324932_+	PRK07360, PRK07360, FO synthase subunit 2; Reviewed	NA|313aa|down_7|NZ_AP018281.1_2325027_2325966_+	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs	NA|449aa|down_8|NZ_AP018281.1_2326085_2327432_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|743aa|down_9|NZ_AP018281.1_2328014_2330243_-	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	13	2487358-2487503	12	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	GTTGTAATAATAGTTGGGGCAGAGTCTTGTAATCTTCTAGAATTTATAGGTGT	53	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA,NA|121aa|down_3|NZ_AP018281.1_2491855_2492218_-,NA|183aa|down_8|NZ_AP018281.1_2497073_2497622_+	NA|162aa|up_9|NZ_AP018281.1_2474482_2474968_+	CHL00088, apcB, allophycocyanin beta subunit	NA|68aa|up_8|NZ_AP018281.1_2475242_2475446_+	pfam01383, CpcD, CpcD/allophycocyanin linker domain	NA|393aa|up_7|NZ_AP018281.1_2475564_2476743_+	pfam01098, FTSW_RODA_SPOVE, Cell cycle protein	NA|1038aa|up_6|NZ_AP018281.1_2476927_2480041_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|395aa|up_5|NZ_AP018281.1_2480559_2481744_-	PRK07415, PRK07415, NAD(P)H-quinone oxidoreductase subunit H; Validated	NA|427aa|up_4|NZ_AP018281.1_2481987_2483268_+	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|339aa|up_3|NZ_AP018281.1_2483561_2484578_-	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|119aa|up_2|NZ_AP018281.1_2484806_2485163_-	pfam10664, NdhM, Cyanobacterial and plastid NDH-1 subunit M	NA|170aa|up_1|NZ_AP018281.1_2485250_2485760_-	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|116aa|up_0|NZ_AP018281.1_2486120_2486468_+	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated	NA|354aa|down_0|NZ_AP018281.1_2488398_2489460_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|272aa|down_1|NZ_AP018281.1_2489746_2490562_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|373aa|down_2|NZ_AP018281.1_2490583_2491702_-	TIGR00236, UDP-N-acetylglucosamine_2-epimerase, UDP-N-acetylglucosamine 2-epimerase	NA|121aa|down_3|NZ_AP018281.1_2491855_2492218_-	NA	NA|417aa|down_4|NZ_AP018281.1_2492768_2494019_+	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|242aa|down_5|NZ_AP018281.1_2494153_2494879_+	cd02978, KaiB_like, KaiB-like family; composed of the circadian clock proteins, KaiB and the N-terminal KaiB-like sensory domain of SasA	NA|330aa|down_6|NZ_AP018281.1_2494868_2495858_-	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit	NA|236aa|down_7|NZ_AP018281.1_2496035_2496743_+	cd19927, REC_Ycf29, phosphoacceptor receiver (REC) domain of probable transcriptional regulator Ycf29	NA|183aa|down_8|NZ_AP018281.1_2497073_2497622_+	NA	NA|30aa|down_9|NZ_AP018281.1_2497841_2497931_-	pfam03742, PetN, PetN
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	14	2846514-2846603	13	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	AGAAGCTAATAGCCCAAAGCTAA	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|138aa|up_8|NZ_AP018281.1_2837137_2837551_+,NA|80aa|up_6|NZ_AP018281.1_2838887_2839127_-,NA|91aa|up_3|NZ_AP018281.1_2841492_2841765_-,NA|163aa|down_2|NZ_AP018281.1_2850216_2850705_-,NA|139aa|down_8|NZ_AP018281.1_2857240_2857657_+	NA|360aa|up_9|NZ_AP018281.1_2835449_2836529_+	PRK14071, PRK14071, ATP-dependent 6-phosphofructokinase	NA|138aa|up_8|NZ_AP018281.1_2837137_2837551_+	NA	NA|416aa|up_7|NZ_AP018281.1_2837561_2838809_+	cd07079, ALDH_F18-19_ProA-GPR, Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19	NA|80aa|up_6|NZ_AP018281.1_2838887_2839127_-	NA	NA|441aa|up_5|NZ_AP018281.1_2839435_2840758_-	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|225aa|up_4|NZ_AP018281.1_2840798_2841473_+	PRK11617, PRK11617, deoxyribonuclease V	NA|91aa|up_3|NZ_AP018281.1_2841492_2841765_-	NA	NA|458aa|up_2|NZ_AP018281.1_2842136_2843510_+	smart00563, PlsC, Phosphate acyltransferases	NA|551aa|up_1|NZ_AP018281.1_2844174_2845827_+	PRK12561, PRK12561, NAD(P)H-quinone oxidoreductase subunit 4; Provisional	NA|91aa|up_0|NZ_AP018281.1_2846163_2846436_+	COG1254, AcyP, Acylphosphatases [Energy production and conversion]	NA|464aa|down_0|NZ_AP018281.1_2846697_2848089_+	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]	NA|616aa|down_1|NZ_AP018281.1_2848197_2850045_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|163aa|down_2|NZ_AP018281.1_2850216_2850705_-	NA	NA|404aa|down_3|NZ_AP018281.1_2850926_2852138_+	TIGR03087, stp1, sugar transferase, PEP-CTERM/EpsH1 system associated	NA|533aa|down_4|NZ_AP018281.1_2852332_2853931_-	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|296aa|down_5|NZ_AP018281.1_2854120_2855008_+	PRK12870, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|480aa|down_6|NZ_AP018281.1_2855226_2856666_+	smart00637, CBD_II, CBD_II domain	NA|162aa|down_7|NZ_AP018281.1_2856662_2857148_-	pfam09655, Nitr_red_assoc, Conserved nitrate reductase-associated protein (Nitr_red_assoc)	NA|139aa|down_8|NZ_AP018281.1_2857240_2857657_+	NA	NA|304aa|down_9|NZ_AP018281.1_2857751_2858663_-	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	15	2886115-2886235	14	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	TAGAGCGACTAAAACAGATTATCGGTGATTAATT	34	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|290aa|up_8|NZ_AP018281.1_2873444_2874314_+,NA	NA|331aa|up_9|NZ_AP018281.1_2872306_2873299_+	cd11024, CuRO_1_2DMCO_NIR_like, The cupredoxin domain 1 of a two-domain laccase related to nitrite reductase	NA|290aa|up_8|NZ_AP018281.1_2873444_2874314_+	NA	NA|418aa|up_7|NZ_AP018281.1_2874494_2875748_+	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|224aa|up_6|NZ_AP018281.1_2875771_2876443_+	PRK05467, PRK05467, Fe(II)-dependent oxygenase superfamily protein; Provisional	NA|299aa|up_5|NZ_AP018281.1_2876449_2877346_-	cd00537, MTHFR, Methylenetetrahydrofolate reductase (MTHFR)	NA|343aa|up_4|NZ_AP018281.1_2877357_2878386_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|938aa|up_3|NZ_AP018281.1_2878656_2881470_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|268aa|up_2|NZ_AP018281.1_2881670_2882474_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|259aa|up_1|NZ_AP018281.1_2882486_2883263_-	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family	NA|393aa|up_0|NZ_AP018281.1_2883525_2884704_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|277aa|down_0|NZ_AP018281.1_2886306_2887137_-	pfam04187, Cofac_haem_bdg, Haem-binding uptake, Tiki superfamily, ChaN	NA|425aa|down_1|NZ_AP018281.1_2887211_2888486_+	pfam09506, Salt_tol_Pase, Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase)	NA|577aa|down_2|NZ_AP018281.1_2888793_2890524_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|352aa|down_3|NZ_AP018281.1_2890803_2891859_+	TIGR03609, S_layer_CsaB, polysaccharide pyruvyl transferase CsaB	NA|317aa|down_4|NZ_AP018281.1_2892098_2893049_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|275aa|down_5|NZ_AP018281.1_2893262_2894087_-	pfam06051, DUF928, Domain of Unknown Function (DUF928)	NA|211aa|down_6|NZ_AP018281.1_2894526_2895159_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|327aa|down_7|NZ_AP018281.1_2895176_2896157_+	pfam08852, DUF1822, Protein of unknown function (DUF1822)	NA|775aa|down_8|NZ_AP018281.1_2896168_2898493_+	COG4252, COG4252, Predicted transmembrane sensor domain [Signal transduction mechanisms]	NA|265aa|down_9|NZ_AP018281.1_2898472_2899267_-	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	16	2990425-2990530	15	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	GCTGCATCGCTCCTGACTCCTGACTCCTGACT	32	1	11	2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498|2990457-2990498	NZ_AP018281.1_566495-566454|NZ_AP018281.1_2990383-2990424|NZ_AP018281.1_1206946-1206905|NZ_AP018281.1_2014249-2014208|NZ_AP018281.1_2511593-2511552|NZ_AP018281.1_523205-523246|NZ_AP018281.1_560906-560947|NZ_AP018281.1_744774-744815|NZ_AP018281.1_802512-802553|NZ_AP018281.1_3781392-3781433|NZ_AP018281.1_934196-934155	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA,NA|102aa|down_1|NZ_AP018281.1_2993030_2993336_+,NA|150aa|down_8|NZ_AP018281.1_3001628_3002078_+	NA|1241aa|up_9|NZ_AP018281.1_2974231_2977954_+	pfam05860, Haemagg_act, haemagglutination activity domain	NA|638aa|up_8|NZ_AP018281.1_2977943_2979857_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|885aa|up_7|NZ_AP018281.1_2980156_2982811_+	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown]	NA|118aa|up_6|NZ_AP018281.1_2983807_2984161_-	pfam04483, DUF565, Protein of unknown function (DUF565)	NA|204aa|up_5|NZ_AP018281.1_2984178_2984790_-	pfam12263, DUF3611, Protein of unknown function (DUF3611)	NA|250aa|up_4|NZ_AP018281.1_2986024_2986774_+	TIGR02191, Ribonuclease_3, ribonuclease III, bacterial	NA|306aa|up_3|NZ_AP018281.1_2986815_2987733_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|161aa|up_2|NZ_AP018281.1_2987768_2988251_-	pfam13430, DUF4112, Domain of unknown function (DUF4112)	NA|153aa|up_1|NZ_AP018281.1_2988336_2988795_-	COG4446, COG4446, Uncharacterized protein conserved in bacteria [Function unknown]	NA|412aa|up_0|NZ_AP018281.1_2988954_2990190_+	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters	NA|558aa|down_0|NZ_AP018281.1_2990720_2992394_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|102aa|down_1|NZ_AP018281.1_2993030_2993336_+	NA	NA|377aa|down_2|NZ_AP018281.1_2993594_2994725_-	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family	NA|543aa|down_3|NZ_AP018281.1_2994842_2996471_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|75aa|down_4|NZ_AP018281.1_2996632_2996857_+	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|451aa|down_5|NZ_AP018281.1_2997306_2998659_+	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E	NA|374aa|down_6|NZ_AP018281.1_2998789_2999911_-	COG4177, LivM, ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]	NA|365aa|down_7|NZ_AP018281.1_3000253_3001348_+	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|150aa|down_8|NZ_AP018281.1_3001628_3002078_+	NA	NA|207aa|down_9|NZ_AP018281.1_3002155_3002776_-	PRK05953, PRK05953, Precorrin-8X methylmutase
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	17	3031088-3031173	16	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	TAGTTCCGAAGCCTCTTTATTTGACGATG	29	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA,NA|183aa|down_5|NZ_AP018281.1_3038798_3039347_+,NA|146aa|down_7|NZ_AP018281.1_3039915_3040353_+	NA|356aa|up_9|NZ_AP018281.1_3017502_3018570_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|285aa|up_8|NZ_AP018281.1_3019010_3019865_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|132aa|up_7|NZ_AP018281.1_3020461_3020857_+	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|780aa|up_6|NZ_AP018281.1_3020961_3023301_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|192aa|up_5|NZ_AP018281.1_3023460_3024036_-	pfam09367, CpeS, CpeS-like protein	NA|131aa|up_4|NZ_AP018281.1_3024234_3024627_+	pfam07736, CM_1, Chorismate mutase type I	NA|577aa|up_3|NZ_AP018281.1_3024907_3026638_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|396aa|up_2|NZ_AP018281.1_3026761_3027949_+	pfam00072, Response_reg, Response regulator receiver domain	NA|346aa|up_1|NZ_AP018281.1_3027976_3029014_+	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|494aa|up_0|NZ_AP018281.1_3029056_3030538_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|143aa|down_0|NZ_AP018281.1_3033206_3033635_+	cd17541, REC_CheB-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator protein-glutamate methylesterase CheB and similar chemotaxis proteins	NA|143aa|down_1|NZ_AP018281.1_3033691_3034120_+	cd17541, REC_CheB-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator protein-glutamate methylesterase CheB and similar chemotaxis proteins	NA|716aa|down_2|NZ_AP018281.1_3034344_3036492_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|305aa|down_3|NZ_AP018281.1_3036646_3037561_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|308aa|down_4|NZ_AP018281.1_3037705_3038629_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|183aa|down_5|NZ_AP018281.1_3038798_3039347_+	NA	NA|150aa|down_6|NZ_AP018281.1_3039459_3039909_+	pfam14347, DUF4399, Domain of unknown function (DUF4399)	NA|146aa|down_7|NZ_AP018281.1_3039915_3040353_+	NA	NA|354aa|down_8|NZ_AP018281.1_3040460_3041522_+	TIGR04052, hypothetical_protein_MettrDRAFT_3899, AZL_007920/MXAN_0976 family protein	NA|400aa|down_9|NZ_AP018281.1_3041601_3042801_+	TIGR04039, MXAN_0977_Heme2, di-heme enzyme, MXAN_0977 family
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	18	3192604-3192709	17	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	TTATTAGGATTAACTATAGTTGTAGAAG	28	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|312aa|up_5|NZ_AP018281.1_3181011_3181947_-,NA|74aa|down_1|NZ_AP018281.1_3194002_3194224_+	NA|406aa|up_9|NZ_AP018281.1_3176172_3177390_+	PRK07424, PRK07424, bifunctional sterol desaturase/short chain dehydrogenase; Validated	NA|410aa|up_8|NZ_AP018281.1_3177626_3178856_-	pfam00331, Glyco_hydro_10, Glycosyl hydrolase family 10	NA|459aa|up_7|NZ_AP018281.1_3178884_3180261_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|232aa|up_6|NZ_AP018281.1_3180295_3180991_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|312aa|up_5|NZ_AP018281.1_3181011_3181947_-	NA	NA|286aa|up_4|NZ_AP018281.1_3181967_3182825_-	pfam03567, Sulfotransfer_2, Sulfotransferase family	NA|452aa|up_3|NZ_AP018281.1_3182907_3184263_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|361aa|up_2|NZ_AP018281.1_3184879_3185962_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|1699aa|up_1|NZ_AP018281.1_3186488_3191585_+	cd08162, MPP_PhoA_N, Synechococcus sp	NA|201aa|up_0|NZ_AP018281.1_3191797_3192400_-	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides	NA|251aa|down_0|NZ_AP018281.1_3193160_3193913_-	pfam01940, DUF92, Integral membrane protein DUF92	NA|74aa|down_1|NZ_AP018281.1_3194002_3194224_+	NA	NA|625aa|down_2|NZ_AP018281.1_3194231_3196106_-	cd01948, EAL, EAL domain	NA|558aa|down_3|NZ_AP018281.1_3196178_3197852_-	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|110aa|down_4|NZ_AP018281.1_3198113_3198443_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|361aa|down_5|NZ_AP018281.1_3198670_3199753_+	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B))	NA|789aa|down_6|NZ_AP018281.1_3199914_3202281_+	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|144aa|down_7|NZ_AP018281.1_3202341_3202773_+	pfam00498, FHA, FHA domain	NA|318aa|down_8|NZ_AP018281.1_3202925_3203879_+	PRK07399, PRK07399, DNA polymerase III subunit delta'; Validated	NA|509aa|down_9|NZ_AP018281.1_3204288_3205815_+	PLN02371, PLN02371, phosphoglucosamine mutase family protein
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	19	3234297-3234374	18	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	TTAAATATCGATGGTCAACGTCC	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|61aa|up_4|NZ_AP018281.1_3228631_3228814_+,NA|120aa|up_1|NZ_AP018281.1_3232961_3233321_+,NA|66aa|down_0|NZ_AP018281.1_3234829_3235027_+,NA|125aa|down_8|NZ_AP018281.1_3242636_3243011_+	NA|218aa|up_9|NZ_AP018281.1_3223996_3224650_+	cd00710, LbH_gamma_CA, Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|472aa|up_8|NZ_AP018281.1_3225290_3226706_+	CHL00040, rbcL, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit	NA|138aa|up_7|NZ_AP018281.1_3226818_3227232_+	pfam02341, RcbX, RbcX protein	NA|112aa|up_6|NZ_AP018281.1_3227258_3227594_+	pfam00101, RuBisCO_small, Ribulose bisphosphate carboxylase, small chain	NA|257aa|up_5|NZ_AP018281.1_3227780_3228551_+	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|61aa|up_4|NZ_AP018281.1_3228631_3228814_+	NA	NA|398aa|up_3|NZ_AP018281.1_3229299_3230493_-	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|684aa|up_2|NZ_AP018281.1_3230690_3232742_+	PLN02666, PLN02666, 5-oxoprolinase	NA|120aa|up_1|NZ_AP018281.1_3232961_3233321_+	NA	NA|127aa|up_0|NZ_AP018281.1_3233473_3233854_+	pfam07784, DUF1622, Protein of unknown function (DUF1622)	NA|66aa|down_0|NZ_AP018281.1_3234829_3235027_+	NA	NA|329aa|down_1|NZ_AP018281.1_3235346_3236333_-	PRK02693, PRK02693, apocytochrome f; Reviewed	NA|180aa|down_2|NZ_AP018281.1_3236431_3236971_-	PRK13474, PRK13474, cytochrome b6-f complex iron-sulfur subunit; Provisional	NA|104aa|down_3|NZ_AP018281.1_3237451_3237763_+	pfam11267, DUF3067, Domain of unknown function (DUF3067)	NA|376aa|down_4|NZ_AP018281.1_3237836_3238964_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|473aa|down_5|NZ_AP018281.1_3239093_3240512_+	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase	NA|310aa|down_6|NZ_AP018281.1_3240627_3241557_+	PLN02632, PLN02632, phytoene synthase	NA|222aa|down_7|NZ_AP018281.1_3241810_3242476_+	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|125aa|down_8|NZ_AP018281.1_3242636_3243011_+	NA	NA|410aa|down_9|NZ_AP018281.1_3243295_3244525_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	20	3234465-3234544	19	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	TTAAATATCGATGGTCAACGTCC	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|61aa|up_4|NZ_AP018281.1_3228631_3228814_+,NA|120aa|up_1|NZ_AP018281.1_3232961_3233321_+,NA|66aa|down_0|NZ_AP018281.1_3234829_3235027_+,NA|125aa|down_8|NZ_AP018281.1_3242636_3243011_+	NA|218aa|up_9|NZ_AP018281.1_3223996_3224650_+	cd00710, LbH_gamma_CA, Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|472aa|up_8|NZ_AP018281.1_3225290_3226706_+	CHL00040, rbcL, ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit	NA|138aa|up_7|NZ_AP018281.1_3226818_3227232_+	pfam02341, RcbX, RbcX protein	NA|112aa|up_6|NZ_AP018281.1_3227258_3227594_+	pfam00101, RuBisCO_small, Ribulose bisphosphate carboxylase, small chain	NA|257aa|up_5|NZ_AP018281.1_3227780_3228551_+	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional	NA|61aa|up_4|NZ_AP018281.1_3228631_3228814_+	NA	NA|398aa|up_3|NZ_AP018281.1_3229299_3230493_-	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|684aa|up_2|NZ_AP018281.1_3230690_3232742_+	PLN02666, PLN02666, 5-oxoprolinase	NA|120aa|up_1|NZ_AP018281.1_3232961_3233321_+	NA	NA|127aa|up_0|NZ_AP018281.1_3233473_3233854_+	pfam07784, DUF1622, Protein of unknown function (DUF1622)	NA|66aa|down_0|NZ_AP018281.1_3234829_3235027_+	NA	NA|329aa|down_1|NZ_AP018281.1_3235346_3236333_-	PRK02693, PRK02693, apocytochrome f; Reviewed	NA|180aa|down_2|NZ_AP018281.1_3236431_3236971_-	PRK13474, PRK13474, cytochrome b6-f complex iron-sulfur subunit; Provisional	NA|104aa|down_3|NZ_AP018281.1_3237451_3237763_+	pfam11267, DUF3067, Domain of unknown function (DUF3067)	NA|376aa|down_4|NZ_AP018281.1_3237836_3238964_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|473aa|down_5|NZ_AP018281.1_3239093_3240512_+	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase	NA|310aa|down_6|NZ_AP018281.1_3240627_3241557_+	PLN02632, PLN02632, phytoene synthase	NA|222aa|down_7|NZ_AP018281.1_3241810_3242476_+	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|125aa|down_8|NZ_AP018281.1_3242636_3243011_+	NA	NA|410aa|down_9|NZ_AP018281.1_3243295_3244525_-	COG4399, COG4399, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	21	3562560-3565215	20,3,4	CRISPRCasFinder,CRT,PILER-CR	no	csx18,cas1,cas2,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Type III-B,Type III-D,Type III-C,Type III-A	GTTTCCATTCAATTAGTTTCTATAAAGAATATAGAG,GTTTCCATTCAATTAGTTTCTATAAAGAATATAGAG,GTTTCCATTC----------AATTAGTTTCTATAAAGAATATAGAG	36,36,46	0	0	NA	NA	NA:NA:NA	35,34,34	35	TypeIII-B,TypeIII-D,TypeIII-C,TypeIII-A	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|107aa|up_6|NZ_AP018281.1_3554928_3555249_+,csx18|97aa|up_1|NZ_AP018281.1_3561124_3561415_+,cmr5gr11|129aa|down_4|NZ_AP018281.1_3571116_3571503_+	NA|256aa|up_9|NZ_AP018281.1_3552468_3553236_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|253aa|up_8|NZ_AP018281.1_3553236_3553995_-	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|202aa|up_7|NZ_AP018281.1_3554021_3554627_-	cd01457, vWA_ORF176_type, VWA ORF176 type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|107aa|up_6|NZ_AP018281.1_3554928_3555249_+	NA	NA|245aa|up_5|NZ_AP018281.1_3555501_3556236_-	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|354aa|up_4|NZ_AP018281.1_3556478_3557540_-	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|331aa|up_3|NZ_AP018281.1_3557936_3558929_+	COG1316, LytR, Transcriptional regulator [Transcription]	NA|172aa|up_2|NZ_AP018281.1_3559068_3559584_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	csx18|97aa|up_1|NZ_AP018281.1_3561124_3561415_+	NA	cas1|330aa|up_0|NZ_AP018281.1_3561411_3562401_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|106aa|down_0|NZ_AP018281.1_3565441_3565759_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas10|1041aa|down_1|NZ_AP018281.1_3565950_3569073_+	pfam12469, DUF3692, CRISPR-associated protein	cmr3gr5|373aa|down_2|NZ_AP018281.1_3569153_3570272_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|262aa|down_3|NZ_AP018281.1_3570290_3571076_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|129aa|down_4|NZ_AP018281.1_3571116_3571503_+	NA	csm3gr7|629aa|down_5|NZ_AP018281.1_3571599_3573486_+	pfam03787, RAMPs, RAMP superfamily	csx1|445aa|down_6|NZ_AP018281.1_3573493_3574828_+	pfam09659, Cas_Csm6, CRISPR-associated protein (Cas_Csm6)	NA|248aa|down_7|NZ_AP018281.1_3574803_3575547_-	pfam04474, DUF554, Protein of unknown function (DUF554)	NA|79aa|down_8|NZ_AP018281.1_3575610_3575847_+	pfam01809, Haemolytic, Haemolytic domain	NA|294aa|down_9|NZ_AP018281.1_3575892_3576774_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	22	3951968-3952070	21	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	GGTAGTGGGTAGGGGAGTAATCCCACAAGGGGACAATG	38	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|113aa|up_6|NZ_AP018281.1_3942844_3943183_-,NA|125aa|up_4|NZ_AP018281.1_3944812_3945187_+,NA|78aa|down_8|NZ_AP018281.1_3965267_3965501_-	NA|664aa|up_9|NZ_AP018281.1_3938120_3940112_-	TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD	NA|333aa|up_8|NZ_AP018281.1_3940502_3941501_-	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|353aa|up_7|NZ_AP018281.1_3941617_3942676_-	pfam13449, Phytase-like, Esterase-like activity of phytase	NA|113aa|up_6|NZ_AP018281.1_3942844_3943183_-	NA	NA|426aa|up_5|NZ_AP018281.1_3943297_3944575_-	pfam00395, SLH, S-layer homology domain	NA|125aa|up_4|NZ_AP018281.1_3944812_3945187_+	NA	NA|364aa|up_3|NZ_AP018281.1_3945217_3946309_+	COG0857, Pta, BioD-like N-terminal domain of phosphotransacetylase [General function prediction only]	NA|925aa|up_2|NZ_AP018281.1_3946705_3949480_-	pfam05860, Haemagg_act, haemagglutination activity domain	NA|543aa|up_1|NZ_AP018281.1_3949629_3951258_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|104aa|up_0|NZ_AP018281.1_3951345_3951657_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|215aa|down_0|NZ_AP018281.1_3952169_3952814_+	pfam07077, DUF1345, Protein of unknown function (DUF1345)	NA|493aa|down_1|NZ_AP018281.1_3952815_3954294_-	TIGR00387, Glycolate_oxidase_subunit_glcD	NA|590aa|down_2|NZ_AP018281.1_3954676_3956446_+	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|817aa|down_3|NZ_AP018281.1_3956479_3958930_+	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain	NA|833aa|down_4|NZ_AP018281.1_3958960_3961459_+	COG4995, COG4995, Uncharacterized protein conserved in bacteria [Function unknown]	NA|415aa|down_5|NZ_AP018281.1_3961696_3962941_+	COG1070, XylB, Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]	NA|247aa|down_6|NZ_AP018281.1_3963205_3963946_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|239aa|down_7|NZ_AP018281.1_3964423_3965140_+	COG5398, COG5398, Heme oxygenase [Inorganic ion transport and metabolism]	NA|78aa|down_8|NZ_AP018281.1_3965267_3965501_-	NA	NA|502aa|down_9|NZ_AP018281.1_3966060_3967566_+	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]
GCF_002368355.1_ASM236835v1	NZ_AP018281	Chondrocystis sp. NIES-4102 DNA, complete genome	23	4347154-4347265	22	CRISPRCasFinder	no		cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	Orphan	ACCAGTACCACCTTTGAGGGTATCATTACCA	31	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|269aa|up_1|NZ_AP018281.1_4333550_4334357_-,NA|175aa|up_0|NZ_AP018281.1_4334517_4335042_-,NA|87aa|down_0|NZ_AP018281.1_4365944_4366205_-,NA|89aa|down_9|NZ_AP018281.1_4376577_4376844_-	NA|249aa|up_9|NZ_AP018281.1_4316162_4316909_+	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|433aa|up_8|NZ_AP018281.1_4317101_4318400_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1089aa|up_7|NZ_AP018281.1_4318466_4321733_+	pfam00873, ACR_tran, AcrB/AcrD/AcrF family	NA|180aa|up_6|NZ_AP018281.1_4322103_4322643_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain	NA|119aa|up_5|NZ_AP018281.1_4322658_4323015_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|383aa|up_4|NZ_AP018281.1_4323218_4324367_+	pfam18154, pPIWI_RE_REase, REase associating with pPIWI_RE	NA|436aa|up_3|NZ_AP018281.1_4329620_4330928_+	pfam13032, DUF3893, Domain of unknown function (DUF3893)	NA|851aa|up_2|NZ_AP018281.1_4330974_4333527_-	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|269aa|up_1|NZ_AP018281.1_4333550_4334357_-	NA	NA|175aa|up_0|NZ_AP018281.1_4334517_4335042_-	NA	NA|87aa|down_0|NZ_AP018281.1_4365944_4366205_-	NA	NA|218aa|down_1|NZ_AP018281.1_4366938_4367592_+	PRK01686, hisG, ATP phosphoribosyltransferase catalytic subunit; Reviewed	NA|612aa|down_2|NZ_AP018281.1_4367788_4369624_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|564aa|down_3|NZ_AP018281.1_4369714_4371406_+	TIGR00815, Sulfate_transporter, high affinity sulphate transporter 1	NA|334aa|down_4|NZ_AP018281.1_4371420_4372422_-	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein	NA|505aa|down_5|NZ_AP018281.1_4372744_4374259_+	COG3046, COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only]	NA|74aa|down_6|NZ_AP018281.1_4374802_4375024_+	pfam10929, DUF2811, Protein of unknown function (DUF2811)	NA|208aa|down_7|NZ_AP018281.1_4375094_4375718_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|275aa|down_8|NZ_AP018281.1_4375718_4376543_-	pfam06750, DiS_P_DiS, Bacterial Peptidase A24 N-terminal domain	NA|89aa|down_9|NZ_AP018281.1_4376577_4376844_-	NA
GCF_002368355.1_ASM236835v1	NZ_AP018284	Chondrocystis sp. NIES-4102 plasmid plasmid3 DNA, complete genome	1	67383-67590	1	CRISPRCasFinder	no		csa3,cas14j,cas14k	Orphan	TACCTGTGAAGCTCGCGTACGATTTTACCTGTGAAGCTCGCGTATTTTTTT	51	0	0	NA	NA	NA	1	1	Orphan	cas14j,RT,cas3,csa3,DEDDh,cas4,cas2,cas1,cas6,cas5,cas7,cas8b5,WYL,DinG,csx18,cas10,cmr3gr5,cmr4gr7,cmr5gr11,csm3gr7,csx1,cas14k,c2c9_V-U4	NA|78aa|up_9|NZ_AP018284.1_59677_59911_-,NA|61aa|up_8|NZ_AP018284.1_59999_60182_-,NA|254aa|up_5|NZ_AP018284.1_61804_62566_-,NA|135aa|up_2|NZ_AP018284.1_64843_65248_+,NA|122aa|up_1|NZ_AP018284.1_65484_65850_+,NA|347aa|up_0|NZ_AP018284.1_66186_67227_-,NA|346aa|down_4|NZ_AP018284.1_74924_75962_-,NA|78aa|down_6|NZ_AP018284.1_78290_78524_-,NA|61aa|down_7|NZ_AP018284.1_78612_78795_-	NA|78aa|up_9|NZ_AP018284.1_59677_59911_-	NA	NA|61aa|up_8|NZ_AP018284.1_59999_60182_-	NA	NA|105aa|up_7|NZ_AP018284.1_60363_60678_-	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold	NA|327aa|up_6|NZ_AP018284.1_60677_61658_-	pfam09299, Mu-transpos_C, Mu transposase, C-terminal	NA|254aa|up_5|NZ_AP018284.1_61804_62566_-	NA	NA|106aa|up_4|NZ_AP018284.1_62633_62951_-	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	NA|267aa|up_3|NZ_AP018284.1_63966_64767_+	pfam13614, AAA_31, AAA domain	NA|135aa|up_2|NZ_AP018284.1_64843_65248_+	NA	NA|122aa|up_1|NZ_AP018284.1_65484_65850_+	NA	NA|347aa|up_0|NZ_AP018284.1_66186_67227_-	NA	NA|1158aa|down_0|NZ_AP018284.1_68030_71504_+	pfam12965, DUF3854, Domain of unknown function (DUF3854)	NA|319aa|down_1|NZ_AP018284.1_71752_72709_-	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	NA|286aa|down_2|NZ_AP018284.1_73169_74027_+	COG3888, COG3888, Predicted transcriptional regulator [Transcription]	NA|68aa|down_3|NZ_AP018284.1_74614_74818_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|346aa|down_4|NZ_AP018284.1_74924_75962_-	NA	NA|568aa|down_5|NZ_AP018284.1_75951_77655_-	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA	NA|78aa|down_6|NZ_AP018284.1_78290_78524_-	NA	NA|61aa|down_7|NZ_AP018284.1_78612_78795_-	NA	NA|105aa|down_8|NZ_AP018284.1_78976_79291_-	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold	NA|404aa|down_9|NZ_AP018284.1_79290_80502_-	pfam00665, rve, Integrase core domain
