assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002357275.1_ASM235727v1	NZ_AP017573	Rickettsia japonica strain HH-1	1	495050-495151	1	CRISPRCasFinder	no		PD-DExK,cas3,DEDDh	Orphan	ATTGCAGCAAAAATTATATCAAGAATT	27	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,cas3,DEDDh	NA,NA|141aa|down_8|NZ_AP017573.1_503908_504331_-	NA|83aa|up_9|NZ_AP017573.1_485772_486021_-	PRK14388, PRK14388, membrane protein insertion efficiency factor YidD	NA|168aa|up_8|NZ_AP017573.1_486013_486517_-	PRK07539, PRK07539, NADH-quinone oxidoreductase subunit NuoE	NA|91aa|up_7|NZ_AP017573.1_486578_486851_-	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|392aa|up_6|NZ_AP017573.1_486940_488116_-	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D	NA|243aa|up_5|NZ_AP017573.1_488214_488943_-	PRK06074, PRK06074, NADH dehydrogenase subunit C; Provisional	NA|175aa|up_4|NZ_AP017573.1_488920_489445_-	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB	NA|124aa|up_3|NZ_AP017573.1_489449_489821_-	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated	NA|412aa|up_2|NZ_AP017573.1_489978_491214_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|158aa|up_1|NZ_AP017573.1_491214_491688_-	COG4765, COG4765, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|up_0|NZ_AP017573.1_493512_494433_+	PRK00283, xerD, tyrosine recombinase	NA|388aa|down_0|NZ_AP017573.1_495647_496811_+	pfam17422, DUF5410, Family of unknown function (DUF5410)	NA|261aa|down_1|NZ_AP017573.1_496818_497601_-	PRK06603, PRK06603, enoyl-[acyl-carrier-protein] reductase FabI	NA|505aa|down_2|NZ_AP017573.1_497676_499191_+	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|49aa|down_3|NZ_AP017573.1_499288_499435_+	pfam00157, Pou, Pou domain - N-terminal to homeobox domain	NA|268aa|down_4|NZ_AP017573.1_499886_500690_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|306aa|down_5|NZ_AP017573.1_501348_502266_+	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|280aa|down_6|NZ_AP017573.1_502270_503110_+	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|241aa|down_7|NZ_AP017573.1_503106_503829_+	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|141aa|down_8|NZ_AP017573.1_503908_504331_-	NA	NA|147aa|down_9|NZ_AP017573.1_504354_504795_-	sd00045, ANK, ankyrin repeats
GCF_002357275.1_ASM235727v1	NZ_AP017573	Rickettsia japonica strain HH-1	2	1182971-1183071	2	CRISPRCasFinder	no		PD-DExK,cas3,DEDDh	Orphan	TAACTTTAATATATTATGTTTATAAGGTTTTTAAAA	36	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,cas3,DEDDh	NA|94aa|up_4|NZ_AP017573.1_1177634_1177916_-,NA|95aa|up_3|NZ_AP017573.1_1178521_1178806_-,NA	NA|160aa|up_9|NZ_AP017573.1_1173945_1174425_-	COG3807, COG3807, Uncharacterized protein conserved in bacteria [Function unknown]	NA|576aa|up_8|NZ_AP017573.1_1174417_1176145_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|109aa|up_7|NZ_AP017573.1_1176141_1176468_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|80aa|up_6|NZ_AP017573.1_1176622_1176862_+	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	NA|144aa|up_5|NZ_AP017573.1_1177007_1177439_-	smart00869, Autotransporter, Autotransporter beta-domain	NA|94aa|up_4|NZ_AP017573.1_1177634_1177916_-	NA	NA|95aa|up_3|NZ_AP017573.1_1178521_1178806_-	NA	NA|72aa|up_2|NZ_AP017573.1_1181514_1181730_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|216aa|up_1|NZ_AP017573.1_1181741_1182389_+	PRK01526, PRK01526, Maf-like protein; Reviewed	NA|144aa|up_0|NZ_AP017573.1_1182522_1182954_-	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|306aa|down_0|NZ_AP017573.1_1183121_1184039_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|96aa|down_1|NZ_AP017573.1_1184214_1184502_+	pfam09361, Phasin_2, Phasin protein	NA|201aa|down_2|NZ_AP017573.1_1184549_1185152_-	cd09170, PLDc_Nuc, Catalytic domain of EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins	NA|493aa|down_3|NZ_AP017573.1_1186151_1187630_-	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]	NA|525aa|down_4|NZ_AP017573.1_1187784_1189359_-	PRK10788, PRK10788, periplasmic folding chaperone; Provisional	NA|2322aa|down_5|NZ_AP017573.1_1189552_1196518_-	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|745aa|down_6|NZ_AP017573.1_1196847_1199082_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|260aa|down_7|NZ_AP017573.1_1200025_1200805_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|38aa|down_8|NZ_AP017573.1_1200838_1200952_-	TIGR03777, RPE4, Rickettsial palindromic element RPE4 domain	NA|103aa|down_9|NZ_AP017573.1_1201051_1201360_+	COG2003, RadC, DNA repair proteins [DNA replication, recombination, and repair]
