assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002357175.1_ASM235717v1	NZ_AP017578	Rickettsia japonica strain Nakase	1	495134-495235	1	CRISPRCasFinder	no		PD-DExK,cas3,DEDDh	Orphan	ATTGCAGCAAAAATTATATCAAGAATT	27	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,cas3,DEDDh	NA,NA|141aa|down_8|NZ_AP017578.1_503992_504415_-	NA|83aa|up_9|NZ_AP017578.1_485856_486105_-	PRK14388, PRK14388, membrane protein insertion efficiency factor YidD	NA|168aa|up_8|NZ_AP017578.1_486097_486601_-	PRK07539, PRK07539, NADH-quinone oxidoreductase subunit NuoE	NA|91aa|up_7|NZ_AP017578.1_486662_486935_-	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|392aa|up_6|NZ_AP017578.1_487024_488200_-	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D	NA|243aa|up_5|NZ_AP017578.1_488298_489027_-	PRK06074, PRK06074, NADH dehydrogenase subunit C; Provisional	NA|175aa|up_4|NZ_AP017578.1_489004_489529_-	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB	NA|124aa|up_3|NZ_AP017578.1_489533_489905_-	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated	NA|412aa|up_2|NZ_AP017578.1_490062_491298_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|158aa|up_1|NZ_AP017578.1_491298_491772_-	COG4765, COG4765, Uncharacterized protein conserved in bacteria [Function unknown]	NA|307aa|up_0|NZ_AP017578.1_493596_494517_+	PRK00283, xerD, tyrosine recombinase	NA|388aa|down_0|NZ_AP017578.1_495731_496895_+	pfam17422, DUF5410, Family of unknown function (DUF5410)	NA|261aa|down_1|NZ_AP017578.1_496902_497685_-	PRK06603, PRK06603, enoyl-[acyl-carrier-protein] reductase FabI	NA|505aa|down_2|NZ_AP017578.1_497760_499275_+	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|49aa|down_3|NZ_AP017578.1_499372_499519_+	pfam00157, Pou, Pou domain - N-terminal to homeobox domain	NA|268aa|down_4|NZ_AP017578.1_499970_500774_+	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]	NA|306aa|down_5|NZ_AP017578.1_501432_502350_+	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]	NA|280aa|down_6|NZ_AP017578.1_502354_503194_+	COG4120, COG4120, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|241aa|down_7|NZ_AP017578.1_503190_503913_+	COG1101, PhnK, ABC-type uncharacterized transport system, ATPase component [General function prediction only]	NA|141aa|down_8|NZ_AP017578.1_503992_504415_-	NA	NA|147aa|down_9|NZ_AP017578.1_504438_504879_-	sd00045, ANK, ankyrin repeats
GCF_002357175.1_ASM235717v1	NZ_AP017578	Rickettsia japonica strain Nakase	2	1183059-1183159	2	CRISPRCasFinder	no		PD-DExK,cas3,DEDDh	Orphan	TAACTTTAATATATTATGTTTATAAGGTTTTTAAAA	36	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,cas3,DEDDh	NA|94aa|up_4|NZ_AP017578.1_1177722_1178004_-,NA|95aa|up_3|NZ_AP017578.1_1178609_1178894_-,NA	NA|160aa|up_9|NZ_AP017578.1_1174033_1174513_-	COG3807, COG3807, Uncharacterized protein conserved in bacteria [Function unknown]	NA|576aa|up_8|NZ_AP017578.1_1174505_1176233_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|109aa|up_7|NZ_AP017578.1_1176229_1176556_-	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|80aa|up_6|NZ_AP017578.1_1176710_1176950_+	COG0271, BolA, Stress-induced morphogen (activity unknown) [Signal transduction mechanisms]	NA|144aa|up_5|NZ_AP017578.1_1177095_1177527_-	smart00869, Autotransporter, Autotransporter beta-domain	NA|94aa|up_4|NZ_AP017578.1_1177722_1178004_-	NA	NA|95aa|up_3|NZ_AP017578.1_1178609_1178894_-	NA	NA|72aa|up_2|NZ_AP017578.1_1181602_1181818_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|216aa|up_1|NZ_AP017578.1_1181829_1182477_+	PRK01526, PRK01526, Maf-like protein; Reviewed	NA|144aa|up_0|NZ_AP017578.1_1182610_1183042_-	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|306aa|down_0|NZ_AP017578.1_1183209_1184127_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|96aa|down_1|NZ_AP017578.1_1184302_1184590_+	pfam09361, Phasin_2, Phasin protein	NA|201aa|down_2|NZ_AP017578.1_1184637_1185240_-	cd09170, PLDc_Nuc, Catalytic domain of EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins	NA|493aa|down_3|NZ_AP017578.1_1186239_1187718_-	COG0043, UbiD, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases [Coenzyme metabolism]	NA|525aa|down_4|NZ_AP017578.1_1187872_1189447_-	PRK10788, PRK10788, periplasmic folding chaperone; Provisional	NA|2322aa|down_5|NZ_AP017578.1_1189640_1196606_-	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|745aa|down_6|NZ_AP017578.1_1196935_1199170_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|260aa|down_7|NZ_AP017578.1_1200113_1200893_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|57aa|down_8|NZ_AP017578.1_1200926_1201097_-	TIGR03777, RPE4, Rickettsial palindromic element RPE4 domain	NA|103aa|down_9|NZ_AP017578.1_1201139_1201448_+	COG2003, RadC, DNA repair proteins [DNA replication, recombination, and repair]
