The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP017372	Halorhodospira halochloris strain DSM 1059	2834560	340689	389155	2834560	transposase,holin	Escherichia_phage(28.57%)	43	NA	NA
WP_096407493.1|340689_341673_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_162549281.1|343528_343972_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_096407499.1|343968_344565_-	DedA family protein	NA	NA	NA	NA	NA
WP_109962906.1|344549_346085_-	glycogen synthase GlgA	NA	NA	NA	NA	NA
WP_109962907.1|346208_346565_-	alpha amylase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_096407506.1|348458_349724_+	glucose-1-phosphate adenylyltransferase	NA	NA	NA	NA	NA
WP_096407509.1|349710_351477_+	glycoside hydrolase	NA	NA	NA	NA	NA
WP_096407511.1|351473_353033_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_096407514.1|353393_355943_-	alpha-glucan family phosphorylase	NA	NA	NA	NA	NA
WP_096407516.1|356933_357164_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_096407519.1|357185_357506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096407521.1|358004_358421_-	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_096410287.1|358420_358696_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_096407525.1|359166_359364_+	DUF2283 domain-containing protein	NA	NA	NA	NA	NA
WP_162549282.1|359702_360023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096407530.1|360091_360388_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	S5VY82	Leptospira_phage	34.2	1.7e-06
WP_162549283.1|360770_361163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096407535.1|361732_362185_-	helix-turn-helix domain-containing protein	NA	K4ICM4	Acidithiobacillus_phage	51.0	2.0e-30
WP_096410288.1|363045_364041_-	DUF4351 domain-containing protein	NA	NA	NA	NA	NA
WP_096407540.1|365173_365476_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_096407543.1|365575_365995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549247.1|366068_366347_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096407547.1|366480_366768_+	HigA family addiction module antidote protein	NA	A0A2P1MXE5	Escherichia_phage	46.8	5.8e-12
WP_096407549.1|366961_367393_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_096407553.1|367822_368122_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_162549284.1|368176_368812_-	sulfotransferase family 2 domain-containing protein	NA	NA	NA	NA	NA
WP_162549285.1|369092_369734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549286.1|369819_370800_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_096407561.1|370887_372210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096407563.1|372353_373454_-	phosphotransferase	NA	NA	NA	NA	NA
WP_162549287.1|373482_374865_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_096407567.1|374857_375778_-	FkbM family methyltransferase	NA	NA	NA	NA	NA
WP_162549288.1|375826_376612_-	hypothetical protein	NA	M4QRC6	Tetraselmis_viridis_virus	30.1	1.0e-26
WP_096407569.1|376826_377447_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
WP_096407571.1|377531_378059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096407573.1|378539_379211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096407575.1|379432_380182_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_109962847.1|380442_381384_-|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	25.8	1.6e-10
WP_096409948.1|381408_382188_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	36.6	1.3e-34
WP_096409949.1|382168_383686_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.6	1.1e-27
WP_096407579.1|385245_386211_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_162549289.1|387159_388017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096407583.1|388405_389155_-|holin	phosphocholine cytidylyltransferase family protein	holin	NA	NA	NA	NA
>prophage 2
NZ_AP017372	Halorhodospira halochloris strain DSM 1059	2834560	1511921	1555736	2834560	transposase,integrase	Rhizobium_phage(16.67%)	36	1526332:1526346	1549191:1549205
WP_096409492.1|1511921_1512215_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_096409495.1|1513385_1514321_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096409498.1|1515383_1516754_+|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_096409500.1|1518202_1518487_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162549421.1|1518804_1519131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096409502.1|1519057_1519381_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_096409503.1|1519605_1519977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096409505.1|1520338_1520836_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_096409506.1|1520958_1522731_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_096409508.1|1522820_1523828_-	DUF3150 domain-containing protein	NA	NA	NA	NA	NA
WP_096409509.1|1523965_1524925_-	AAA family ATPase	NA	L7TKP0	Rhizobium_phage	31.3	6.7e-28
WP_179948759.1|1525012_1525966_-	hydrolase or metal-binding protein	NA	NA	NA	NA	NA
WP_096409511.1|1526063_1527098_-	YqaJ viral recombinase family protein	NA	Q0H280	Geobacillus_phage	40.4	3.9e-50
1526332:1526346	attL	GCATCCTCCTGAAAG	NA	NA	NA	NA
WP_162549422.1|1527081_1527441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549423.1|1528206_1528920_+	inovirus-type Gp2 protein	NA	NA	NA	NA	NA
WP_162549424.1|1529732_1530488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549425.1|1531638_1532322_+	inovirus-type Gp2 protein	NA	NA	NA	NA	NA
WP_096410365.1|1532575_1532944_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_096409517.1|1533829_1535188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096409518.1|1535276_1535534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096409520.1|1535782_1536376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549426.1|1536536_1536953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549427.1|1537726_1538488_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_096409525.1|1538749_1539121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096409526.1|1539285_1540362_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	25.5	4.3e-07
WP_096409527.1|1540566_1540863_+	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_096409528.1|1540859_1541060_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549248.1|1541149_1541302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_162549419.1|1541458_1541917_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_162549420.1|1542210_1542405_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_096409492.1|1542361_1542655_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_096409530.1|1543824_1544760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096409531.1|1545467_1548560_-	hypothetical protein	NA	A0A1B1IUG5	uncultured_Mediterranean_phage	34.3	1.4e-10
WP_096409533.1|1549405_1552879_+	class I SAM-dependent DNA methyltransferase	NA	Q6NE04	Leptospira_phage	23.5	1.9e-32
1549191:1549205	attR	GCATCCTCCTGAAAG	NA	NA	NA	NA
WP_096409534.1|1552921_1553218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096409535.1|1554218_1555736_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	33.6	1.8e-27
>prophage 3
NZ_AP017372	Halorhodospira halochloris strain DSM 1059	2834560	1627203	1637991	2834560	tRNA	uncultured_Mediterranean_phage(57.14%)	9	NA	NA
WP_096409593.1|1627203_1628184_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	34.6	1.3e-42
WP_096409594.1|1628276_1629233_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	42.8	9.9e-48
WP_096409595.1|1629235_1631113_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_096409596.1|1631116_1631461_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	39.8	1.3e-10
WP_096409597.1|1631515_1631893_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	42.0	3.6e-09
WP_096410370.1|1631971_1633081_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	47.9	8.4e-91
WP_096409598.1|1633135_1633741_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_096409599.1|1633925_1635614_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	33.7	9.7e-14
WP_096409600.1|1635651_1637991_+	response regulator	NA	Q8QKV7	Ectocarpus_siliculosus_virus	30.2	1.1e-34
>prophage 5
NZ_AP017372	Halorhodospira halochloris strain DSM 1059	2834560	2011382	2058504	2834560	tRNA,plate,protease	Staphylococcus_phage(22.22%)	47	NA	NA
WP_096409876.1|2011382_2011838_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	58.8	6.4e-29
WP_096409877.1|2011859_2012459_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_096409878.1|2012543_2013275_-	cytochrome c1	NA	NA	NA	NA	NA
WP_096409879.1|2013271_2014516_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_096409880.1|2014512_2015136_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_096409881.1|2015296_2016055_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_096410400.1|2016319_2017573_+	trypsin-like peptidase domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	33.6	3.4e-11
WP_096409882.1|2017766_2018864_-	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
WP_096409883.1|2018860_2020177_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_096409884.1|2020201_2020849_-	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_096409885.1|2020864_2022121_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_096409886.1|2022124_2022463_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_096409887.1|2022462_2023086_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_096409888.1|2023213_2023669_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
WP_096409889.1|2023686_2024463_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA	NA
WP_096410401.1|2024459_2025281_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.8	5.2e-21
WP_096409890.1|2025506_2026541_+	KpsF/GutQ family sugar-phosphate isomerase	NA	E5E465	Acinetobacter_phage	37.2	8.9e-18
WP_096410402.1|2026546_2027086_+	HAD hydrolase family protein	NA	A0A140XBD6	Dickeya_phage	33.6	6.7e-17
WP_096409891.1|2027115_2027688_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_096409892.1|2027665_2028178_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_096409893.1|2028181_2028907_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	1.6e-21
WP_096409894.1|2028962_2030435_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_096409895.1|2030447_2030795_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_096409896.1|2030822_2031293_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_162549471.1|2031289_2031955_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096410403.1|2031945_2032800_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	28.5	4.3e-10
WP_096409898.1|2032796_2033186_+	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_096409899.1|2033197_2033479_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_096410404.1|2033480_2034767_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_096409900.1|2034829_2036275_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_096410405.1|2036314_2037097_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_096409901.1|2037365_2040890_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096409902.1|2040891_2042352_-	ribonuclease G	NA	NA	NA	NA	NA
WP_096409903.1|2042348_2042936_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_096409904.1|2043001_2043463_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_096409905.1|2043623_2043974_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_170113012.1|2043995_2044643_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_096409907.1|2044682_2045960_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	45.4	3.9e-92
WP_096409908.1|2046065_2047073_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_162549472.1|2047075_2047606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096410406.1|2047592_2050064_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	45.0	1.1e-199
WP_096409910.1|2050262_2050799_+	zinc ribbon-containing protein	NA	NA	NA	NA	NA
WP_096409911.1|2051013_2053044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096409912.1|2053263_2055411_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_096409913.1|2055421_2056351_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_096409914.1|2056332_2058057_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_096409915.1|2058063_2058504_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
