The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP018052	Thiohalobacter thiocyanaticus strain FOKN1	3233441	1230795	1239049	3233441		Staphylococcus_phage(50.0%)	8	NA	NA
WP_096365636.1|1230795_1232460_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	27.1	6.2e-37
WP_096365638.1|1232536_1232998_+	DUF5615 family PIN-like protein	NA	NA	NA	NA	NA
WP_096365640.1|1233392_1234649_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	54.0	1.4e-102
WP_096365642.1|1234727_1235231_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_096367513.1|1235280_1236354_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	34.0	5.7e-44
WP_096365644.1|1236673_1237330_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	36.1	2.1e-28
WP_096367514.1|1237404_1238508_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	38.1	3.7e-62
WP_096365646.1|1238572_1239049_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.3	2.2e-32
>prophage 2
NZ_AP018052	Thiohalobacter thiocyanaticus strain FOKN1	3233441	2250791	2261368	3233441	tRNA	Tupanvirus(33.33%)	10	NA	NA
WP_096366603.1|2250791_2251874_-	3-deoxy-7-phosphoheptulonate synthase AroG	NA	S4VUY9	Pandoravirus	50.4	1.5e-87
WP_096366604.1|2252175_2252904_-	VacJ family lipoprotein	NA	NA	NA	NA	NA
WP_096366605.1|2253677_2254034_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_096366606.1|2254014_2254314_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	8.0e-12
WP_096366607.1|2254318_2256700_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	A0A1L3IZU3	BeAn_58058_virus	27.8	4.0e-05
WP_096366608.1|2256918_2257938_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	39.1	1.5e-30
WP_096366609.1|2258263_2258623_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_096366610.1|2258640_2258838_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_096366611.1|2258911_2259430_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.9	8.7e-14
WP_096366612.1|2259433_2261368_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.9	1.4e-125
>prophage 3
NZ_AP018052	Thiohalobacter thiocyanaticus strain FOKN1	3233441	2647603	2685627	3233441	transposase,protease,tRNA	Streptococcus_phage(25.0%)	41	NA	NA
WP_096367608.1|2647603_2648467_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_096366917.1|2648475_2649624_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_096366918.1|2649770_2651090_-	GTPase HflX	NA	NA	NA	NA	NA
WP_096366919.1|2651119_2651389_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_096366920.1|2651580_2652492_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_096366921.1|2652533_2654351_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	35.3	4.0e-98
WP_096366922.1|2654491_2655799_-	N-acetylmuramoyl-L-alanine amidase	NA	M1IQ67	Bacillus_virus	27.5	1.9e-17
WP_096366923.1|2655964_2656429_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_096366924.1|2656412_2657915_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_096366925.1|2658199_2659288_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_096366926.1|2659577_2660885_+|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	60.8	1.8e-116
WP_096366927.1|2661120_2661975_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	46.0	2.4e-45
WP_157745655.1|2662172_2664233_+	penicillin-binding protein activator	NA	NA	NA	NA	NA
WP_157745657.1|2664132_2664519_+	YraN family protein	NA	NA	NA	NA	NA
WP_096366930.1|2664542_2665139_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_096366931.1|2665141_2665726_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_157745659.1|2665913_2666069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096366932.1|2666075_2666840_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_096366933.1|2666863_2667967_-	PAS domain-containing protein	NA	Q6XLV6	Feldmannia_irregularis_virus	26.6	5.9e-12
WP_157745661.1|2668042_2669104_-	NnrS family protein	NA	NA	NA	NA	NA
WP_096366935.1|2669241_2670153_+	phosphorylase	NA	NA	NA	NA	NA
WP_096366936.1|2670167_2670410_-	DUF4282 domain-containing protein	NA	NA	NA	NA	NA
WP_096366937.1|2670464_2671100_-	LysE family translocator	NA	NA	NA	NA	NA
WP_096366938.1|2671212_2671629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157745663.1|2671955_2672405_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_096366939.1|2672450_2672990_-	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_096366940.1|2673245_2673569_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_096366941.1|2673667_2673985_-	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
WP_096367609.1|2674068_2674368_-	HigA family addiction module antidote protein	NA	M9MUN2	Rhodococcus_phage	54.5	8.2e-17
WP_096366942.1|2674379_2674661_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_157745665.1|2674830_2675190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157745667.1|2675276_2676131_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.2	1.0e-43
WP_096366944.1|2676127_2676499_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_096366945.1|2677867_2678518_-	DUF4145 domain-containing protein	NA	M1PSB6	Streptococcus_phage	45.9	2.0e-31
WP_096366946.1|2678614_2679352_-	adenylosuccinate lyase	NA	NA	NA	NA	NA
WP_157745669.1|2679455_2679818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096366947.1|2680700_2681012_-	DUF2695 domain-containing protein	NA	NA	NA	NA	NA
WP_096366948.1|2681036_2681600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157745671.1|2681700_2682087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157745181.1|2683057_2684290_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_157745181.1|2684394_2685627_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
