assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002356335.1_ASM235633v1	NZ_AP018165	[Mycobacterium] stephanolepidis strain NJB0901	1	902424-902622	1	CRISPRCasFinder	no	csa3	DEDDh,csa3,cas3,DinG,PD-DExK,cas4,WYL	Type I-A	AAGGCTGTTGAGCCCAAGGTTGATCCGACGAAGGCTGTCGACCCGACAAAGG	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,cas3,DinG,PD-DExK,cas4,WYL	NA|96aa|up_5|NZ_AP018165.1_894759_895047_+,NA|144aa|down_3|NZ_AP018165.1_909098_909530_+	NA|278aa|up_9|NZ_AP018165.1_891903_892737_-	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|72aa|up_8|NZ_AP018165.1_892791_893007_+	pfam14013, MT0933_antitox, MT0933-like antitoxin protein	NA|378aa|up_7|NZ_AP018165.1_893032_894166_+	pfam03583, LIP, Secretory lipase	NA|148aa|up_6|NZ_AP018165.1_894202_894646_+	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|96aa|up_5|NZ_AP018165.1_894759_895047_+	NA	NA|304aa|up_4|NZ_AP018165.1_895062_895974_-	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family	NA|184aa|up_3|NZ_AP018165.1_896065_896617_+	pfam17940, TetR_C_31, Tetracyclin repressor-like, C-terminal domain	NA|133aa|up_2|NZ_AP018165.1_898713_899112_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|506aa|up_1|NZ_AP018165.1_899186_900704_+	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|129aa|up_0|NZ_AP018165.1_900756_901143_+	pfam05610, DUF779, Protein of unknown function (DUF779)	NA|249aa|down_0|NZ_AP018165.1_903054_903801_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|555aa|down_1|NZ_AP018165.1_906919_908584_+	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|143aa|down_2|NZ_AP018165.1_908673_909102_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|144aa|down_3|NZ_AP018165.1_909098_909530_+	NA	NA|222aa|down_4|NZ_AP018165.1_909491_910157_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|148aa|down_5|NZ_AP018165.1_910163_910607_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|366aa|down_6|NZ_AP018165.1_910603_911701_-	cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)	NA|213aa|down_7|NZ_AP018165.1_911687_912326_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|494aa|down_8|NZ_AP018165.1_912400_913882_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	csa3|252aa|down_9|NZ_AP018165.1_913934_914690_+	cd08893, SRPBCC_CalC_Aha1-like_GntR-HTH, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins; some contain an N-terminal GntR family winged HTH DNA-binding domain
GCF_002356335.1_ASM235633v1	NZ_AP018165	[Mycobacterium] stephanolepidis strain NJB0901	2	3748399-3749097	1	CRT	no		DEDDh,csa3,cas3,DinG,PD-DExK,cas4,WYL	Orphan	TCTTCGCNTCNGTCTTCG	18	1	1	3748936-3748953	NZ_AP018165.1_3749104-3749121	NA	10	10	Orphan	DEDDh,csa3,cas3,DinG,PD-DExK,cas4,WYL	NA|101aa|up_8|NZ_AP018165.1_3738950_3739253_+,NA|97aa|up_7|NZ_AP018165.1_3739583_3739874_-,NA|112aa|up_5|NZ_AP018165.1_3741459_3741795_+,NA|109aa|up_1|NZ_AP018165.1_3746100_3746427_+,NA|82aa|down_0|NZ_AP018165.1_3749708_3749954_-	NA|161aa|up_9|NZ_AP018165.1_3738168_3738651_+	pfam03724, META, META domain	NA|101aa|up_8|NZ_AP018165.1_3738950_3739253_+	NA	NA|97aa|up_7|NZ_AP018165.1_3739583_3739874_-	NA	NA|271aa|up_6|NZ_AP018165.1_3739925_3740738_+	cd01069, PBP2_PheC, Cyclohexadienyl dehydratase, a member of the type 2 periplasmic binding fold protein superfamily	NA|112aa|up_5|NZ_AP018165.1_3741459_3741795_+	NA	NA|299aa|up_4|NZ_AP018165.1_3742782_3743679_+	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|137aa|up_3|NZ_AP018165.1_3743675_3744086_+	pfam02657, SufE, Fe-S metabolism associated domain	NA|600aa|up_2|NZ_AP018165.1_3744207_3746007_+	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|109aa|up_1|NZ_AP018165.1_3746100_3746427_+	NA	NA|211aa|up_0|NZ_AP018165.1_3746835_3747468_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|82aa|down_0|NZ_AP018165.1_3749708_3749954_-	NA	NA|421aa|down_1|NZ_AP018165.1_3750683_3751946_-	COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]	NA|222aa|down_2|NZ_AP018165.1_3752164_3752830_+	pfam11139, SfLAP, Sap, sulfolipid-1-addressing protein	NA|453aa|down_3|NZ_AP018165.1_3752879_3754238_-	PRK08297, PRK08297, L-lysine aminotransferase; Provisional	NA|159aa|down_4|NZ_AP018165.1_3754303_3754780_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|436aa|down_5|NZ_AP018165.1_3754870_3756178_+	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|520aa|down_6|NZ_AP018165.1_3756174_3757734_+	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B	NA|464aa|down_7|NZ_AP018165.1_3757756_3759148_-	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|227aa|down_8|NZ_AP018165.1_3759299_3759980_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|1516aa|down_9|NZ_AP018165.1_3760009_3764557_+	PRK09751, PRK09751, putative ATP-dependent helicase Lhr; Provisional
