The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	12982	60314	2479312	integrase,tRNA,transposase	Staphylococcus_phage(27.27%)	41	24414:24427	62718:62731
WP_002434130.1|12982_14269_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.4	7.0e-89
WP_002434554.1|14604_15297_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_030062311.1|15293_15623_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_030062313.1|15914_16883_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_030062315.1|17036_17963_+	DUF2232 domain-containing protein	NA	NA	NA	NA	NA
WP_023349981.1|17992_19960_+	DHH family phosphoesterase	NA	NA	NA	NA	NA
WP_002434521.1|19956_20403_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_002434020.1|20451_21852_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.6	9.9e-113
WP_002434422.1|22130_23414_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	35.1	5.2e-68
WP_002434481.1|24352_25054_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.3	2.3e-41
24414:24427	attL	ATTTGAAGAAAGAG	NA	NA	NA	NA
WP_096389077.1|25066_26899_+	cell wall metabolism sensor histidine kinase WalK	NA	Q8QKV7	Ectocarpus_siliculosus_virus	25.1	2.2e-11
WP_002434631.1|26891_28229_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_030065550.1|28229_29018_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_030065548.1|29642_30425_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	37.0	1.5e-38
WP_030065546.1|30836_31316_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_000566670.1|31637_32894_+	DUF3578 domain-containing protein	NA	NA	NA	NA	NA
WP_001282729.1|33308_33551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096389079.1|33578_34253_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	4.9e-126
WP_000664728.1|34546_35023_+	aminoglycoside nucleotidyltransferase ANT4	NA	NA	NA	NA	NA
WP_096389079.1|35664_36339_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	4.9e-126
WP_000119405.1|37657_38920_-	plasmid recombination protein	NA	NA	NA	NA	NA
WP_001242578.1|39426_39831_-	bleomycin binding protein	NA	NA	NA	NA	NA
WP_001795128.1|40047_40818_-	aminoglycoside O-nucleotidyltransferase ANT(4')-Ia	NA	NA	NA	NA	NA
WP_096389079.1|41009_41684_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	97.3	4.9e-126
WP_000958858.1|42905_43649_+	glycerophosphoryl diester phosphodiesterase	NA	NA	NA	NA	NA
WP_000872606.1|43745_44174_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_001801873.1|44219_46229_-	PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA	NA	NA	NA	NA	NA
WP_000952923.1|46325_48083_+	beta-lactam sensor/signal transducer MecR1	NA	NA	NA	NA	NA
WP_000369214.1|48082_48454_+	mecA-type methicillin resistance repressor MecI	NA	NA	NA	NA	NA
WP_014532405.1|48538_48607_-	phenol-soluble modulin PSM-mec	NA	NA	NA	NA	NA
WP_010922808.1|48940_50071_+	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_000438836.1|51551_52616_-	DsrE/DsrF/DrsH-like family protein	NA	NA	NA	NA	NA
WP_000220507.1|52751_53012_+	persulfide-sensing transcriptional repressor CstR	NA	NA	NA	NA	NA
WP_000350222.1|53011_53656_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_001092058.1|53994_54657_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010959190.1|55048_55108_+	erythromycin resistance leader peptide	NA	NA	NA	NA	NA
WP_001072201.1|55165_55897_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_000067268.1|56022_56805_-	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	NA	NA	NA
WP_000361059.1|56955_57333_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001557544.1|57339_59232_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000868132.1|59228_60314_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
62718:62731	attR	ATTTGAAGAAAGAG	NA	NA	NA	NA
>prophage 2
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	1011427	1051843	2479312	tRNA	Staphylococcus_phage(96.3%)	32	NA	NA
WP_002434680.1|1011427_1012831_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	60.6	2.3e-170
WP_049427393.1|1012827_1013829_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	50.9	2.7e-96
WP_029625717.1|1013825_1014074_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	90.2	3.1e-38
WP_049427390.1|1014144_1014618_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	55.1	8.7e-45
WP_049427387.1|1014598_1015384_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	73.7	3.6e-104
WP_002434740.1|1015461_1017054_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	89.8	1.9e-285
WP_023350065.1|1017429_1018623_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	86.1	5.7e-194
WP_002434861.1|1018733_1019642_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	82.5	2.6e-106
WP_049427380.1|1019797_1020637_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	71.8	2.7e-118
WP_023350066.1|1020714_1021071_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	32.8	3.2e-07
WP_023350067.1|1021067_1021430_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	64.2	2.1e-38
WP_002434733.1|1021485_1021794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002434689.1|1022086_1022800_+	transaldolase	NA	R9TM64	Synechococcus_phage	36.5	1.3e-20
WP_049427378.1|1022955_1023399_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	48.3	1.8e-23
WP_002434754.1|1023385_1023829_-	competence protein ComK	NA	NA	NA	NA	NA
WP_049427376.1|1023848_1024319_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	45.5	4.6e-30
WP_002434817.1|1024527_1024746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002434844.1|1025061_1025913_+	N-acetylglucosaminidase	NA	A0A1J0MFB0	Staphylococcus_phage	34.5	4.0e-32
WP_070597874.1|1026228_1027719_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	89.3	1.4e-19
WP_096389229.1|1028127_1029177_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	68.1	3.0e-138
WP_049427367.1|1029183_1029816_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	77.1	3.4e-89
WP_023350073.1|1029827_1031009_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	76.6	3.9e-179
WP_002434688.1|1031051_1031510_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	84.9	7.1e-60
WP_096389230.1|1031576_1032578_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	72.9	1.5e-134
WP_049427363.1|1032824_1033652_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002434669.1|1034065_1034467_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002434676.1|1034544_1035108_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	67.6	3.5e-69
WP_002434687.1|1035104_1036058_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	86.8	7.8e-69
WP_070597871.1|1036164_1037388_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	80.9	7.9e-183
WP_172969458.1|1037679_1040097_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	88.2	0.0e+00
WP_002434691.1|1040117_1040429_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	74.8	7.4e-37
WP_096389232.1|1040734_1051843_+	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	34.9	2.2e-58
>prophage 3
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	1175441	1186991	2479312	tRNA	uncultured_Mediterranean_phage(57.14%)	8	NA	NA
WP_002436053.1|1175441_1176446_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	2.2e-05
WP_002436078.1|1176447_1177473_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_049427500.1|1177495_1178635_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.3	4.9e-86
WP_002436110.1|1178650_1178914_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	44.1	4.4e-06
WP_096389260.1|1179149_1181441_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.2	7.4e-33
WP_070597847.1|1181580_1183854_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.2	4.1e-68
WP_002453394.1|1183872_1184391_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	3.3e-29
WP_002436070.1|1184801_1186991_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	37.2	2.0e-11
>prophage 4
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	1664890	1734456	2479312	tRNA,holin,terminase,integrase,tail,portal,protease,plate	Staphylococcus_phage(70.97%)	93	1677042:1677057	1741431:1741446
WP_049428507.1|1664890_1667641_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	26.6	2.8e-87
WP_030065292.1|1667966_1668620_-	DivIVA domain-containing protein	NA	NA	NA	NA	NA
WP_030065290.1|1668643_1669432_-	RNA-binding protein	NA	NA	NA	NA	NA
WP_023350429.1|1669552_1669843_-	YggT family protein	NA	NA	NA	NA	NA
WP_030065288.1|1669854_1670466_-	cell division protein SepF	NA	NA	NA	NA	NA
WP_002435178.1|1670462_1671137_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_030065286.1|1671154_1671946_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_030065284.1|1672198_1673386_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_002435260.1|1673418_1674819_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_030065282.1|1674922_1676338_-	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA	NA
WP_002435137.1|1676353_1677703_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
1677042:1677057	attL	CAAATGAGATAATCAT	NA	NA	NA	NA
WP_023350433.1|1677704_1678670_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_023350434.1|1678849_1681195_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_023350435.1|1681175_1681577_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_002435203.1|1681589_1682525_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_002435248.1|1682539_1682971_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_030065277.1|1683114_1684728_-	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA	NA
WP_030065275.1|1684915_1685356_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_030065273.1|1685408_1686095_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA	NA
WP_016898755.1|1686210_1686345_-	beta-class phenol-soluble modulin	NA	NA	NA	NA	NA
WP_096389327.1|1686395_1686530_-	beta-class phenol-soluble modulin	NA	NA	NA	NA	NA
WP_002435168.1|1686585_1686720_-	beta-class phenol-soluble modulin	NA	NA	NA	NA	NA
WP_002435197.1|1686763_1686898_-	beta-class phenol-soluble modulin	NA	NA	NA	NA	NA
WP_002442393.1|1687654_1688827_+	MFS transporter	NA	NA	NA	NA	NA
WP_002442391.1|1689027_1690410_-	N-acetylmuramoyl-L-alanine amidase	NA	A1BU77	Staphylococcus_virus	89.6	6.5e-258
WP_002442389.1|1690409_1690676_-|holin	phage holin	holin	A0A1W6JPF8	Staphylococcus_phage	77.3	1.3e-34
WP_002442387.1|1690727_1691123_-	hypothetical protein	NA	A0A1W6JNM7	Staphylococcus_phage	56.5	2.4e-32
WP_002442385.1|1691109_1691532_-	hypothetical protein	NA	A0A1W6JNI9	Staphylococcus_phage	52.3	4.7e-34
WP_002442383.1|1691569_1691710_-	XkdX family protein	NA	NA	NA	NA	NA
WP_002442381.1|1691693_1692050_-	hypothetical protein	NA	W5RV37	Staphylococcus_phage	44.2	7.7e-22
WP_002442379.1|1692064_1693783_-|plate	BppU family phage baseplate upper protein	plate	A0A060AKT8	Staphylococcus_phage	57.7	6.2e-133
WP_002442377.1|1693782_1696446_-	hypothetical protein	NA	A0A060AKF8	Staphylococcus_phage	67.6	4.3e-290
WP_002442375.1|1696457_1696901_-	hypothetical protein	NA	Q4ZCD3	Staphylococcus_virus	39.0	1.3e-13
WP_002442374.1|1696893_1698465_-|tail	phage tail protein	tail	A0A2H4J2R7	uncultured_Caudovirales_phage	67.0	3.1e-208
WP_002442372.1|1698473_1699310_-|tail	phage tail family protein	tail	A0A2H4J7E0	uncultured_Caudovirales_phage	49.5	3.9e-72
WP_044466295.1|1699324_1705501_-|tail	phage tail tape measure protein	tail	Q8LTH9	Staphylococcus_phage	53.7	1.4e-283
WP_002442368.1|1705515_1705674_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	62.7	3.5e-11
WP_044466296.1|1705724_1706066_-	hypothetical protein	NA	A0A0K1LKJ0	Staphylococcus_phage	62.8	7.9e-32
WP_002442364.1|1706107_1706335_-	hypothetical protein	NA	A0A1X9SIM4	Staphylococcus_phage	50.7	2.5e-10
WP_044466297.1|1706346_1707003_-|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	75.9	8.2e-86
WP_002442358.1|1707044_1707440_-	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	66.2	8.0e-44
WP_049306929.1|1707441_1707843_-	hypothetical protein	NA	R4WAN5	Staphylococcus_phage	73.7	2.6e-50
WP_002442353.1|1707839_1708202_-	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	43.9	4.6e-22
WP_002442352.1|1708182_1708482_-	hypothetical protein	NA	A0A2H4JAM0	uncultured_Caudovirales_phage	47.3	1.8e-16
WP_002442348.1|1709707_1710457_-|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	47.0	2.3e-60
WP_002442346.1|1710443_1711604_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	53.2	2.7e-116
WP_002442344.1|1711619_1713260_-|terminase	terminase large subunit	terminase	A0A059T7Q8	Listeria_phage	69.3	3.2e-227
WP_002442342.1|1713256_1713559_-|terminase	P27 family phage terminase small subunit	terminase	Q4ZD78	Staphylococcus_phage	51.1	4.4e-18
WP_002442340.1|1713707_1714043_-	HNH endonuclease	NA	D2XR61	Bacillus_phage	55.5	4.1e-25
WP_002442338.1|1714177_1714612_-	transcriptional regulator	NA	B5WZN8	Staphylococcus_phage	88.1	1.3e-66
WP_002442336.1|1714624_1714771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002442335.1|1714788_1715388_-	hypothetical protein	NA	D2JLD8	Staphylococcus_phage	42.2	1.8e-34
WP_002442333.1|1715544_1715715_-	hypothetical protein	NA	A0A1W6JPC7	Staphylococcus_phage	76.5	5.1e-16
WP_002442331.1|1715751_1716177_-	dUTP diphosphatase	NA	A0A1W6JNN6	Staphylococcus_phage	99.3	5.2e-73
WP_153227380.1|1716176_1716347_-	hypothetical protein	NA	A0A1W6JNR7	Staphylococcus_phage	100.0	6.3e-22
WP_126493813.1|1716390_1716483_-	DUF1024 family protein	NA	NA	NA	NA	NA
WP_002442327.1|1716484_1716661_-	hypothetical protein	NA	A0A1W6JNN8	Staphylococcus_phage	100.0	1.2e-28
WP_002442325.1|1716647_1716926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160312604.1|1717004_1717379_-	hypothetical protein	NA	A0A2R3ZXY5	Staphylococcus_phage	37.6	4.9e-11
WP_002442321.1|1717378_1717816_-	DNA N-6-adenine-methyltransferase	NA	A0A1W6JNN4	Staphylococcus_phage	99.2	8.5e-71
WP_002442319.1|1717812_1718220_-	hypothetical protein	NA	A0A2H4J9W1	uncultured_Caudovirales_phage	31.9	5.4e-11
WP_002442318.1|1718233_1718392_-	hypothetical protein	NA	A0A1W6JNP9	Staphylococcus_phage	98.1	1.4e-20
WP_002442316.1|1718394_1718583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002442314.1|1718572_1718803_-	DUF3310 domain-containing protein	NA	A0A0D4DCF1	Staphylococcus_phage	68.6	5.9e-23
WP_096389329.1|1719004_1719322_-	hypothetical protein	NA	H9A0Z8	Staphylococcus_phage	70.0	1.5e-32
WP_002442308.1|1719371_1719566_-	hypothetical protein	NA	A0A1W6JNR4	Staphylococcus_phage	96.9	9.7e-27
WP_002442307.1|1719558_1719966_-	DUF1064 domain-containing protein	NA	A0A1W6JNS0	Staphylococcus_phage	96.3	1.6e-71
WP_002442305.1|1719974_1720220_-	hypothetical protein	NA	A0A1W6JNN7	Staphylococcus_phage	98.8	3.0e-41
WP_002442304.1|1720222_1720378_-	hypothetical protein	NA	A0A1W6JNM0	Staphylococcus_phage	100.0	2.8e-21
WP_037541374.1|1720371_1721142_-	ATP-binding protein	NA	A0A1W6JNQ7	Staphylococcus_phage	95.7	8.3e-138
WP_096389332.1|1721152_1721932_-	conserved phage C-terminal domain-containing protein	NA	A6M985	Geobacillus_virus	66.7	2.4e-39
WP_002442301.1|1721918_1722680_-	HNH endonuclease	NA	A0A125RNK0	Pseudomonas_phage	37.9	2.0e-35
WP_037541373.1|1722672_1722879_-	helix-turn-helix transcriptional regulator	NA	Q4ZC20	Staphylococcus_virus	66.2	1.6e-19
WP_002442299.1|1722884_1723115_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JPR2	Staphylococcus_phage	71.1	7.4e-26
WP_002442298.1|1723111_1723780_-	hypothetical protein	NA	A0A1W6JPR0	Staphylococcus_phage	79.6	6.4e-102
WP_002442297.1|1723780_1724329_-	HNH endonuclease	NA	A0A1W6JNF8	Staphylococcus_phage	81.3	2.4e-83
WP_002442296.1|1724341_1724896_-	single-stranded DNA-binding protein	NA	A0A0H3U303	Staphylococcus_phage	88.6	3.2e-91
WP_002442295.1|1724922_1725699_-	ATP-binding protein	NA	Q8SDW5	Staphylococcus_phage	87.3	1.3e-125
WP_002442294.1|1725699_1726185_-	siphovirus Gp157 family protein	NA	A0A2H4JCW3	uncultured_Caudovirales_phage	88.2	2.5e-71
WP_002442292.1|1726150_1726432_-	hypothetical protein	NA	A0A1W6JNM8	Staphylococcus_phage	96.2	3.1e-18
WP_162837223.1|1726493_1726667_-	hypothetical protein	NA	A0A1W6JNL3	Staphylococcus_phage	96.5	1.9e-21
WP_002442287.1|1726680_1726890_-	hypothetical protein	NA	A0A1W6JNP3	Staphylococcus_phage	94.2	2.6e-30
WP_002442285.1|1726978_1727455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002442282.1|1727417_1727651_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002442280.1|1727689_1728481_-	phage antirepressor Ant	NA	A0A2H4J5J5	uncultured_Caudovirales_phage	80.6	1.9e-116
WP_009382133.1|1728480_1728675_-	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	89.1	1.1e-22
WP_002442276.1|1728938_1729277_+	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	74.5	1.7e-42
WP_037541370.1|1729290_1729962_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	46.6	5.0e-46
WP_002442272.1|1729988_1730564_+	hypothetical protein	NA	A0A2H4IYV6	uncultured_Caudovirales_phage	68.6	3.5e-16
WP_002442271.1|1730812_1731880_+	Abi family protein	NA	A0A2H4JB40	uncultured_Caudovirales_phage	50.7	2.4e-82
WP_002442268.1|1731943_1732990_+|integrase	site-specific integrase	integrase	A0A2H4J9L9	uncultured_Caudovirales_phage	73.0	1.2e-147
WP_030065271.1|1733366_1733876_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_030065269.1|1733868_1734456_-	XTP/dITP diphosphatase	NA	A0A068ESG1	Cassava_brown_streak_virus	36.2	4.0e-07
1741431:1741446	attR	ATGATTATCTCATTTG	NA	NA	NA	NA
>prophage 5
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	1820051	1828521	2479312		Synechococcus_phage(33.33%)	9	NA	NA
WP_030065175.1|1820051_1820618_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	42.0	3.2e-30
WP_030065174.1|1820614_1821649_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	42.4	1.1e-63
WP_096389342.1|1821641_1823126_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.2	8.5e-46
WP_064212240.1|1823104_1825294_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.6	3.1e-137
WP_023350479.1|1825286_1825958_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_030065170.1|1825959_1826220_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_030065168.1|1826216_1826924_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	H8ZMN3	Synechococcus_phage	43.7	2.8e-47
WP_002435349.1|1826924_1828052_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_030065166.1|1828038_1828521_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	40.8	2.0e-20
>prophage 6
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	1992094	2012713	2479312	integrase	Streptococcus_phage(90.0%)	25	2005130:2005144	2011276:2011290
WP_000420682.1|1992094_1992409_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1992424_1992811_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|1992839_1994225_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|1994227_1994380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|1994402_1995608_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|1995650_1995872_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1995988_1996486_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1996460_1996967_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1996950_1999398_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_000804748.1|1999400_2001578_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	100.0	0.0e+00
WP_000769868.1|2001574_2002576_+	bifunctional lysozyme/C40 family peptidase	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|2002572_2003505_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_001814923.1|2003749_2003866_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691736.1|2003881_2005801_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	99.5	0.0e+00
2005130:2005144	attL	ACAGTCATTTATATG	NA	NA	NA	NA
WP_000336323.1|2005919_2006087_+	cysteine-rich KTR domain-containing protein	NA	D0R0F6	Streptococcus_phage	68.0	1.6e-14
WP_001227347.1|2006146_2006500_-	helix-turn-helix domain-containing protein	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_000804885.1|2007004_2007427_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|2007423_2007654_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_000814511.1|2008114_2008318_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|2008399_2009617_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_023350637.1|2009946_2010693_+	poly-gamma-glutamate hydrolase family protein	NA	A0A2H4IZ42	uncultured_Caudovirales_phage	42.4	2.4e-41
WP_030064982.1|2010813_2011098_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002433282.1|2011121_2011346_+	hypothetical protein	NA	NA	NA	NA	NA
2011276:2011290	attR	ACAGTCATTTATATG	NA	NA	NA	NA
WP_030064980.1|2011655_2012390_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002433447.1|2012512_2012713_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	67.7	5.9e-19
>prophage 7
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	2091877	2099383	2479312		Pandoravirus(16.67%)	10	NA	NA
WP_030063462.1|2091877_2093032_-	aminodeoxychorismate synthase component I	NA	A0A0B5J984	Pandoravirus	36.1	1.3e-25
WP_030063460.1|2093021_2093609_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	39.6	4.1e-36
WP_002433505.1|2093915_2094587_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.0	2.6e-63
WP_002433142.1|2094588_2095008_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_030063457.1|2095011_2095725_+	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	43.5	8.5e-52
WP_002433459.1|2095824_2096424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_030059103.1|2096704_2097142_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_002433139.1|2097193_2097667_+	DoxX family protein	NA	NA	NA	NA	NA
WP_030059105.1|2097641_2098331_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.8e-35
WP_030059107.1|2098333_2099383_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.5	2.4e-18
>prophage 8
NZ_AP014956	Staphylococcus capitis strain TW2795	2479312	2392004	2408246	2479312	integrase,terminase	Staphylococcus_phage(45.0%)	22	2394061:2394075	2416132:2416146
WP_049401922.1|2392004_2392574_-|terminase	terminase small subunit	terminase	A0A2H4JBF3	uncultured_Caudovirales_phage	90.0	1.8e-92
WP_053026909.1|2392575_2392917_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4JEH8	uncultured_Caudovirales_phage	48.2	7.4e-22
WP_096389383.1|2392913_2393351_-	pathogenicity island protein	NA	A0A2H4JBD6	uncultured_Caudovirales_phage	93.1	2.0e-67
WP_070441482.1|2393402_2393615_-	hypothetical protein	NA	A0A2H4JHW4	uncultured_Caudovirales_phage	62.3	1.0e-13
WP_096389386.1|2393614_2394202_-	pathogenicity island protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	79.1	2.8e-77
2394061:2394075	attL	TAGCAATTAATTCTT	NA	NA	NA	NA
WP_096389389.1|2394216_2394969_-	hypothetical protein	NA	A0A2H4JD56	uncultured_Caudovirales_phage	94.8	4.5e-128
WP_002476284.1|2394978_2395311_-	hypothetical protein	NA	A0A2H4JHK4	uncultured_Caudovirales_phage	99.1	4.2e-54
WP_096389393.1|2395669_2396254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096389396.1|2396250_2396895_-	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	69.0	7.1e-82
WP_096389399.1|2396896_2397178_-	pathogenicity island protein	NA	A0A1W6JQE4	Staphylococcus_phage	75.6	8.2e-35
WP_002502283.1|2397179_2397542_-	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	80.8	7.8e-54
WP_096389402.1|2397813_2399301_-	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	87.4	2.5e-255
WP_096389404.1|2399313_2400186_-	primase alpha helix C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	50.5	7.4e-74
WP_096389407.1|2400283_2400622_-	hypothetical protein	NA	A0A2H4JBC6	uncultured_Caudovirales_phage	41.1	7.9e-16
WP_096389410.1|2400623_2400983_-	pathogenicity island protein	NA	NA	NA	NA	NA
WP_096389413.1|2401001_2401274_-	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	45.0	1.0e-10
WP_096389416.1|2401274_2401487_-	helix-turn-helix transcriptional regulator	NA	Q4ZE78	Staphylococcus_phage	64.3	2.4e-18
WP_096389418.1|2401630_2402326_+	helix-turn-helix transcriptional regulator	NA	Q4ZE79	Staphylococcus_phage	36.8	8.9e-14
WP_096389420.1|2402359_2403676_+	DUF4041 domain-containing protein	NA	M1NRY5	Streptococcus_phage	43.0	5.7e-62
WP_096389422.1|2403697_2404915_+|integrase	site-specific integrase	integrase	A7TWE6	Staphylococcus_phage	48.6	7.8e-98
WP_023349905.1|2405059_2406601_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.1	4.7e-23
WP_030061277.1|2406779_2408246_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	1.4e-93
2416132:2416146	attR	AAGAATTAATTGCTA	NA	NA	NA	NA
