The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP017652	Streptococcus sp. NPS 308	1924728	4188	66281	1924728	holin,capsid,integrase,portal,head,tail,terminase,tRNA	Streptococcus_phage(63.46%)	67	NA	NA
WP_096405649.1|4188_4758_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_096405651.1|4758_8262_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_001234973.1|8319_8586_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_000041917.1|8578_8947_+	septum formation initiator family protein	NA	NA	NA	NA	NA
WP_096405653.1|9066_10335_+	serine hydrolase	NA	NA	NA	NA	NA
WP_096405655.1|10331_11609_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A7K9Y8	Acanthocystis_turfacea_chlorella_virus	25.4	3.8e-10
WP_096405657.1|11613_12156_+	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	28.8	4.7e-10
WP_000744576.1|12171_14130_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	H8ZJI5	Ostreococcus_tauri_virus	47.3	1.1e-106
WP_096408773.1|20935_22222_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	36.7	6.6e-71
WP_096405661.1|22423_22891_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_096405663.1|23099_24242_-|integrase	site-specific integrase	integrase	U4KJ82	Streptococcus_phage	96.1	1.2e-204
WP_096405665.1|24367_24832_-	hypothetical protein	NA	Q708S1	Streptococcus_phage	68.2	4.4e-33
WP_096405666.1|24857_25595_-	helix-turn-helix transcriptional regulator	NA	A0A1S5S8S8	Streptococcus_phage	76.4	8.9e-105
WP_172842410.1|25749_25968_+	helix-turn-helix transcriptional regulator	NA	A0A1S5S8R4	Streptococcus_phage	75.7	6.6e-24
WP_172842362.1|26022_26175_+	hypothetical protein	NA	A0A1S5S8Z4	Streptococcus_phage	58.0	3.5e-08
WP_096405670.1|26128_26776_-	hypothetical protein	NA	Q7Y4L3	Streptococcus_phage	83.6	3.2e-98
WP_054380428.1|27124_27397_+	hypothetical protein	NA	A0A141E0V6	Streptococcus_phage	97.8	1.1e-41
WP_096405673.1|27578_27878_+	hypothetical protein	NA	A0A1S5SDL6	Streptococcus_phage	47.5	8.2e-17
WP_096405675.1|27892_29173_+	AAA family ATPase	NA	A0A097BY67	Enterococcus_phage	66.1	2.2e-151
WP_096405677.1|29176_30304_+	ATP-binding protein	NA	Q5YA96	Bacillus_phage	60.8	1.2e-105
WP_096405678.1|30367_30919_+	hypothetical protein	NA	A0A097BY29	Enterococcus_phage	47.5	8.9e-33
WP_096405680.1|30929_32513_+	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	77.0	1.6e-236
WP_096405682.1|32528_34814_+	AAA family ATPase	NA	A0A2I7SC35	Paenibacillus_phage	65.8	1.9e-291
WP_096405683.1|35045_35447_+	RusA family crossover junction endodeoxyribonuclease	NA	Q5YA86	Bacillus_phage	62.0	9.9e-42
WP_096405685.1|35443_35659_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405687.1|35662_35851_+	hypothetical protein	NA	A0A2H4JBP8	uncultured_Caudovirales_phage	77.6	2.8e-15
WP_096405689.1|35843_36533_+	DUF1642 domain-containing protein	NA	A0A2H4JBN7	uncultured_Caudovirales_phage	68.1	2.3e-86
WP_096405690.1|36529_37054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096408775.1|37081_37585_+	DUF1642 domain-containing protein	NA	A0A2H4JBN7	uncultured_Caudovirales_phage	48.6	3.9e-27
WP_096405692.1|37749_38088_+	hypothetical protein	NA	A0A1S5SDI1	Streptococcus_phage	83.9	1.4e-52
WP_096405693.1|38089_38350_+	DUF1372 family protein	NA	A0A1S5SFG2	Streptococcus_phage	91.9	8.7e-39
WP_096405695.1|38346_38838_+	DNA-binding protein	NA	A0A1S5SA39	Streptococcus_phage	75.5	1.0e-64
WP_096405696.1|38834_39224_+	hypothetical protein	NA	A0A1S5S8G9	Streptococcus_phage	65.4	1.6e-41
WP_096405698.1|39220_39469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405700.1|39458_39692_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SG49	Streptococcus_phage	47.8	4.7e-12
WP_096405702.1|39696_40122_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SF97	Streptococcus_phage	55.5	1.1e-35
WP_096405703.1|41315_41810_+|terminase	terminase small subunit	terminase	A0A1S5SF14	Streptococcus_phage	95.7	4.3e-79
WP_096405705.1|41799_43014_+|terminase	PBSX family phage terminase large subunit	terminase	A0A1S5SES0	Streptococcus_phage	92.3	1.4e-219
WP_096405706.1|43025_44438_+|portal	phage portal protein	portal	A0A1S5SDU7	Streptococcus_phage	84.3	1.5e-225
WP_096405708.1|44400_46422_+|capsid	minor capsid protein	capsid	A0A141E1T6	Streptococcus_phage	84.7	8.5e-166
WP_096405709.1|46434_46650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157740105.1|47133_47301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405711.1|47319_47532_+	hypothetical protein	NA	A0A1S5SCQ9	Streptococcus_phage	91.4	7.8e-30
WP_096405713.1|47642_48155_+	DUF4355 domain-containing protein	NA	A0A141E1X5	Streptococcus_phage	74.6	6.3e-49
WP_096405714.1|48182_49199_+	sugar-binding protein	NA	A0A1S5SDM6	Streptococcus_phage	92.6	1.3e-175
WP_096405716.1|49209_49413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405717.1|49421_49733_+|head,tail	phage head-tail connector protein	head,tail	A0A1S5S8S7	Streptococcus_phage	71.8	2.2e-33
WP_096405719.1|49713_50052_+	hypothetical protein	NA	A0A1S5S812	Streptococcus_phage	75.9	5.4e-41
WP_096405720.1|50026_50539_+	HK97 gp10 family phage protein	NA	A0A1S5S809	Streptococcus_phage	70.2	1.6e-60
WP_096405722.1|50535_50904_+	hypothetical protein	NA	A0A060QNT4	Streptococcus_phage	80.3	6.1e-54
WP_096405724.1|50907_51321_+|tail	phage tail protein	tail	A0A1S5SF61	Streptococcus_phage	89.1	3.9e-65
WP_096405726.1|51324_51717_+	hypothetical protein	NA	A0A141DZN3	Streptococcus_phage	67.7	2.2e-41
WP_096405728.1|51767_52109_+	hypothetical protein	NA	X2KU36	Streptococcus_phage	79.4	3.0e-39
WP_096405729.1|52109_55349_+	hypothetical protein	NA	A0A1S5S8S1	Streptococcus_phage	60.0	4.5e-201
WP_096405731.1|55360_55711_+	hypothetical protein	NA	A0A1S5SCJ5	Streptococcus_phage	87.1	9.8e-54
WP_172842363.1|55719_59001_+|tail	tail fiber domain-containing protein	tail	E8ZDU0	Streptococcus_phage	41.6	7.7e-233
WP_096405733.1|58997_59207_+	hypothetical protein	NA	Q9AF64	Streptococcus_phage	79.7	5.0e-21
WP_096405735.1|59196_59784_+	hypothetical protein	NA	A0A2H4J9Y8	uncultured_Caudovirales_phage	44.8	5.3e-36
WP_096405737.1|59794_60235_+	hypothetical protein	NA	A0A2H4J6Y6	uncultured_Caudovirales_phage	69.2	1.6e-45
WP_096405739.1|60218_60551_+|holin	phage holin	holin	A0A1S5SCK0	Streptococcus_phage	94.5	3.4e-48
WP_096405741.1|60553_61420_+	CHAP domain-containing protein	NA	Q3BLW5	Phage_SK137	71.3	4.6e-68
WP_096405745.1|61749_62022_+	hypothetical protein	NA	A0A2H4JEP4	uncultured_Caudovirales_phage	83.8	1.1e-31
WP_096405746.1|62195_62639_+	dUTP diphosphatase	NA	Q332E8	Clostridium_botulinum_C_phage	48.0	1.1e-30
WP_172842364.1|62640_63156_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_172842411.1|63166_64531_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_172842365.1|64603_65098_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_000010178.1|65312_66281_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.5	2.5e-46
>prophage 2
NZ_AP017652	Streptococcus sp. NPS 308	1924728	72776	84324	1924728		Synechococcus_phage(33.33%)	7	NA	NA
WP_096405762.1|72776_74936_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.1	1.0e-44
WP_096405764.1|74948_76298_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_172842366.1|76466_77174_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	38.4	1.0e-41
WP_096405768.1|77385_81111_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.8	4.6e-40
WP_096405770.1|81272_82715_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.9	1.1e-53
WP_096408784.1|82753_83776_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.1	4.4e-62
WP_096405771.1|83772_84324_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.2	2.0e-24
>prophage 3
NZ_AP017652	Streptococcus sp. NPS 308	1924728	122893	135788	1924728	integrase	Streptococcus_phage(81.82%)	19	119753:119770	137007:137024
119753:119770	attL	CAAGCCCTTCTAGACCAA	NA	NA	NA	NA
WP_096405815.1|122893_124060_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	71.6	8.7e-163
WP_096405816.1|124339_125239_-	Abi family protein	NA	NA	NA	NA	NA
WP_096405818.1|125539_126130_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	40.0	2.5e-09
WP_096405819.1|126290_126488_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U5	Streptococcus_phage	70.8	5.8e-19
WP_096405821.1|126606_127266_-	hypothetical protein	NA	A0A1S5S7L0	Streptococcus_phage	82.2	6.1e-97
WP_096405822.1|127322_127949_+	Rha family transcriptional regulator	NA	R9QNB1	Lactococcus_phage	40.0	1.4e-29
WP_096405824.1|128228_128429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405825.1|128430_128646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405827.1|128642_128984_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_096405828.1|128976_129249_+	transcriptional regulator	NA	A0A1X9I5U9	Streptococcus_phage	72.1	1.7e-29
WP_172842368.1|129245_129392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405830.1|129397_130990_+	DNA primase	NA	A0A1X9I717	Streptococcus_phage	68.5	4.3e-213
WP_096405831.1|131310_131487_+	hypothetical protein	NA	A0A1X9I5U0	Streptococcus_phage	53.4	5.9e-07
WP_096405833.1|131500_132025_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	48.1	2.1e-36
WP_172842412.1|132114_132624_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	53.9	3.4e-47
WP_096405836.1|133320_133740_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_172842369.1|133910_134066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004245873.1|134068_134224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096405839.1|134981_135788_+	hypothetical protein	NA	M1PFV6	Streptococcus_phage	32.8	7.1e-23
137007:137024	attR	CAAGCCCTTCTAGACCAA	NA	NA	NA	NA
>prophage 4
NZ_AP017652	Streptococcus sp. NPS 308	1924728	543495	552874	1924728	protease	Streptococcus_phage(42.86%)	12	NA	NA
WP_172842380.1|543495_544479_+	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	47.1	4.9e-74
WP_004240353.1|544561_544765_-	ferredoxin	NA	NA	NA	NA	NA
WP_000410182.1|544810_545320_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_096406377.1|545329_546004_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_096406380.1|546122_546629_+	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	41.9	3.1e-24
WP_096406382.1|546830_548063_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.2	2.9e-132
WP_000405203.1|548071_548659_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_001140420.1|548668_549049_+	RidA family protein	NA	NA	NA	NA	NA
WP_096406386.1|549100_549991_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	1.5e-05
WP_096406389.1|549987_550965_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	92.6	2.9e-172
WP_096406391.1|550961_551873_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	91.1	5.2e-147
WP_096406394.1|551905_552874_-	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	94.4	3.8e-63
>prophage 5
NZ_AP017652	Streptococcus sp. NPS 308	1924728	1012442	1017161	1924728		Streptococcus_phage(83.33%)	7	NA	NA
WP_001813542.1|1012442_1012688_+	hypothetical protein	NA	A0A1B0RXA7	Streptococcus_phage	98.8	2.6e-37
WP_000806926.1|1012684_1013020_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000567222.1|1013032_1013401_+	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	97.5	1.1e-58
WP_001072467.1|1013387_1013687_+	hypothetical protein	NA	A0A1B0RX98	Streptococcus_phage	96.0	1.8e-48
WP_000420313.1|1013804_1015268_-	ABC-F type ribosomal protection protein Msr(D)	NA	A0A1B0RXA0	Streptococcus_phage	97.3	3.7e-251
WP_000417519.1|1015387_1016605_-	macrolide efflux MFS transporter Mef(A)	NA	A0A2K5B2B5	Erysipelothrix_phage	90.6	5.1e-198
WP_000873143.1|1016990_1017161_-	hypothetical protein	NA	A0A1X9I6E4	Streptococcus_phage	98.2	3.7e-22
>prophage 6
NZ_AP017652	Streptococcus sp. NPS 308	1924728	1211168	1219589	1924728		Streptococcus_phage(87.5%)	10	NA	NA
WP_096407620.1|1211168_1212047_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.4	3.0e-115
WP_000358227.1|1212049_1212367_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.2e-28
WP_096407623.1|1212403_1213294_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	52.4	1.4e-75
WP_096407625.1|1213290_1213929_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.6	5.7e-76
WP_096407628.1|1214049_1214847_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	52.5	3.8e-61
WP_096407631.1|1214850_1216113_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	65.5	4.5e-141
WP_096407633.1|1216122_1217253_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	59.2	2.2e-115
WP_096407636.1|1217333_1218233_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_096407638.1|1218216_1218684_-	signal peptidase II	NA	NA	NA	NA	NA
WP_001025720.1|1218680_1219589_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.0	4.0e-06
>prophage 7
NZ_AP017652	Streptococcus sp. NPS 308	1924728	1271298	1278753	1924728		Streptococcus_phage(42.86%)	10	NA	NA
WP_096407744.1|1271298_1272618_-	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	28.2	2.4e-31
WP_045616898.1|1272773_1273385_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.2	2.2e-16
WP_096407746.1|1273429_1274158_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_096407749.1|1274394_1275306_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.8	4.1e-91
WP_000926604.1|1275371_1275596_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_096407752.1|1275674_1276418_-	amino acid ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	27.4	1.8e-12
WP_049537241.1|1276417_1277218_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_096407754.1|1277374_1277731_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	56.4	3.7e-32
WP_096407757.1|1277743_1278259_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	53.1	2.9e-46
WP_096407759.1|1278255_1278753_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.4	2.7e-41
>prophage 8
NZ_AP017652	Streptococcus sp. NPS 308	1924728	1850498	1864579	1924728	capsid,integrase	Streptococcus_phage(90.91%)	17	1853792:1853806	1862279:1862293
WP_049537989.1|1850498_1850909_-	DUF722 domain-containing protein	NA	C5J954	Streptococcus_phage	36.3	4.3e-16
WP_049509664.1|1851843_1852704_-|capsid	phage major capsid protein	capsid	A0A1S5S8J5	Streptococcus_phage	31.9	4.9e-30
WP_004261935.1|1852752_1852983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000997172.1|1853072_1853234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049537987.1|1853230_1854076_-	ATP-binding protein	NA	A0A1X9I6C4	Streptococcus_phage	46.1	1.7e-67
1853792:1853806	attL	AAAGAAATTATCAAA	NA	NA	NA	NA
WP_049537985.1|1854087_1854978_-	conserved phage C-terminal domain-containing protein	NA	W6LMS3	Streptococcus_phage	65.7	1.9e-45
WP_080980379.1|1854964_1855285_-	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	52.4	4.4e-16
WP_061853314.1|1855238_1855448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049537981.1|1855449_1855650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049537979.1|1855986_1856247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049537977.1|1856258_1856861_-	Rha family transcriptional regulator	NA	A0A192Y918	Salmonella_phage	31.1	7.2e-12
WP_000909284.1|1857023_1857209_-	hypothetical protein	NA	A0A1X9I5U7	Streptococcus_phage	53.2	2.4e-06
WP_049487577.1|1857350_1857911_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	48.1	7.4e-11
WP_096408682.1|1857915_1858185_+	DUF4177 domain-containing protein	NA	NA	NA	NA	NA
WP_042900397.1|1858371_1859136_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5S7V3	Streptococcus_phage	99.2	1.4e-137
WP_096408685.1|1859447_1860614_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	53.6	2.0e-111
WP_096408913.1|1860823_1864579_-	LPXTG cell wall anchor domain-containing protein	NA	F8HGQ4	Streptococcus_phage	27.5	9.1e-12
1862279:1862293	attR	TTTGATAATTTCTTT	NA	NA	NA	NA
