The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP011032	Pseudoalteromonas tunicata strain D2 chromosome I, complete sequence	3978968	644635	699886	3978968	tail,protease,portal,capsid,head,tRNA,terminase	Pseudomonas_phage(21.43%)	71	NA	NA
WP_009838197.1|644635_645763_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_096035233.1|645775_647833_+	NAD(P)H-hydrate epimerase	NA	A0A0U4J920	Pseudomonas_phage	28.5	4.2e-11
WP_009838200.1|647923_648223_+	NADPH-hydrate epimerase	NA	NA	NA	NA	NA
WP_086009671.1|648230_648689_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_009838202.1|648693_650064_+	AMIN domain-containing protein	NA	A0A067ZJB6	Vibrio_phage	26.9	3.8e-16
WP_009838203.1|650069_651920_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	40.9	3.3e-63
WP_009838204.1|651912_652833_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_009838205.1|652911_653178_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_009838206.1|653194_654484_+	GTPase HflX	NA	NA	NA	NA	NA
WP_040643813.1|654571_655756_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_009838208.1|655761_656640_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_009838209.1|656696_656888_+	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_009838210.1|657057_658371_+	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	36.7	7.0e-68
WP_009838211.1|658524_659157_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_009838213.1|659258_661769_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.7	7.3e-66
WP_009838214.1|661782_662529_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_040643814.1|662716_663058_+	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_009838216.1|663075_663423_+	primosomal replication protein N	NA	NA	NA	NA	NA
WP_009838217.1|663397_663625_+	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_009838218.1|663660_664113_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_009838219.1|664379_664805_+	type IV pilin protein	NA	NA	NA	NA	NA
WP_040643891.1|664804_665248_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_040643893.1|665256_665667_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_009838222.1|665663_666182_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_009838223.1|666192_668076_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838224.1|668260_668839_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_009838225.1|668822_669305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838226.1|669315_670248_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_009838227.1|670372_671752_+	replicative DNA helicase	NA	O80281	Escherichia_phage	70.2	6.8e-183
WP_009838228.1|671754_672831_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	30.3	3.7e-27
WP_009838229.1|672867_673299_-	YjbQ family protein	NA	NA	NA	NA	NA
WP_009838230.1|673295_673763_-	chemotaxis protein CheX	NA	NA	NA	NA	NA
WP_009838231.1|673850_674288_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_009838232.1|674597_674996_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009838233.1|675010_675274_-	hypothetical protein	NA	A0A1D9C9N7	Salinivibrio_phage	56.1	1.4e-20
WP_009838234.1|675442_675796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838235.1|675797_676304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838236.1|676316_676634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838237.1|676626_676986_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009838238.1|677049_677562_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009838239.1|677695_677908_+	helix-turn-helix domain-containing protein	NA	W6MWX8	Pseudomonas_phage	46.0	6.0e-06
WP_009838240.1|677900_678086_+	DUF2116 family Zn-ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_009838241.1|678075_678468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838242.1|678502_679084_+	SAM-dependent methyltransferase	NA	A0A1L5C2A0	Pseudoalteromonas_phage	56.5	1.8e-55
WP_050760032.1|679193_679442_+	hypothetical protein	NA	A0A1L5C2B9	Pseudoalteromonas_phage	53.9	2.2e-15
WP_009838244.1|679438_679990_+	3'-5' exoribonuclease	NA	K7PM77	Enterobacteria_phage	57.5	2.6e-53
WP_119081537.1|679996_682369_+	replication endonuclease	NA	A0A1L5C2A7	Pseudoalteromonas_phage	39.5	8.5e-165
WP_009838246.1|682377_682674_+	hypothetical protein	NA	R9TR78	Vibrio_phage	38.1	4.6e-12
WP_009838247.1|682673_682949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838248.1|682993_683239_-	ogr/Delta-like zinc finger family protein	NA	A0A1L5C2B5	Pseudoalteromonas_phage	98.8	4.3e-40
WP_009838249.1|683582_683825_+	hypothetical protein	NA	A0A2I7RQ60	Vibrio_phage	43.8	4.6e-10
WP_009838250.1|683871_684501_+	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_009838251.1|684508_684964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009838252.1|684963_685290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009838253.1|685286_686351_-|portal	phage portal protein	portal	Q6K1J0	Salmonella_virus	40.8	1.3e-59
WP_009838254.1|686350_688132_-|terminase	terminase	terminase	A0A0F7LCM8	Escherichia_phage	39.7	2.6e-118
WP_009838255.1|688329_689208_+|capsid	phage capsid scaffolding protein	capsid	Q94MZ5	Haemophilus_virus	27.7	1.6e-20
WP_009838256.1|689250_690288_+|capsid	phage major capsid protein, P2 family	capsid	A0A0U4K5I9	Pseudomonas_phage	46.0	1.4e-76
WP_009838257.1|690370_691114_+|terminase	terminase	terminase	NA	NA	NA	NA
WP_040643816.1|691218_691656_+|head	head completion/stabilization protein	head	NA	NA	NA	NA
WP_009838259.1|691652_692126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838260.1|692118_692751_+	hypothetical protein	NA	A5X9H9	Aeromonas_virus	31.1	6.6e-16
WP_009838261.1|692773_693874_+	DUF2586 family protein	NA	A0A0U4KLE6	Pseudomonas_phage	40.4	7.9e-65
WP_009838262.1|693884_694334_+	DUF2597 family protein	NA	A0A0U3TH58	Pseudomonas_phage	42.1	8.3e-29
WP_009838263.1|694333_694966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838264.1|694955_695243_+	hypothetical protein	NA	A0A0U4B0P2	Pseudomonas_phage	38.3	1.1e-10
WP_009838265.1|695266_695410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009838266.1|695414_697925_+|tail	phage tail tape measure protein	tail	R9TRA2	Vibrio_phage	38.5	4.0e-96
WP_009838267.1|697921_698227_+	DUF2590 family protein	NA	A5X9J0	Aeromonas_virus	47.9	1.9e-16
WP_009838268.1|698223_699378_+	hypothetical protein	NA	A5X9J1	Aeromonas_virus	36.7	7.2e-61
WP_009838269.1|699370_699886_+	hypothetical protein	NA	Q1I0Y4	Pasteurella_virus	38.0	2.2e-25
>prophage 2
NZ_CP011032	Pseudoalteromonas tunicata strain D2 chromosome I, complete sequence	3978968	928447	937252	3978968		Tupanvirus(14.29%)	8	NA	NA
WP_009838473.1|928447_930112_-	energy-dependent translational throttle protein EttA	NA	A0A2K9L3Z8	Tupanvirus	28.3	5.6e-38
WP_009838474.1|930305_931586_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	31.0	4.3e-14
WP_009838475.1|931838_933095_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	52.6	2.6e-96
WP_009838476.1|933261_933711_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_009838477.1|933715_934837_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	33.6	1.2e-47
WP_009838478.1|934840_935497_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	33.9	2.1e-20
WP_009838479.1|935567_936677_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	M4QPK3	Synechococcus_phage	36.3	1.6e-36
WP_009838480.1|936787_937252_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.3e-29
>prophage 3
NZ_CP011032	Pseudoalteromonas tunicata strain D2 chromosome I, complete sequence	3978968	1815999	1824261	3978968	tRNA	uncultured_Caudovirales_phage(33.33%)	10	NA	NA
WP_009839787.1|1815999_1818516_+	DNA translocase FtsK	NA	G1DAY1	Mycobacterium_virus	49.6	1.2e-89
WP_009839788.1|1818528_1819140_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_009839789.1|1819132_1820473_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	37.2	1.6e-72
WP_009839790.1|1820459_1820846_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	40.2	2.5e-10
WP_009839791.1|1820855_1822160_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	52.4	4.0e-92
WP_009839792.1|1822231_1822561_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	50.9	1.0e-23
WP_009839793.1|1822563_1822833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009839794.1|1822829_1823186_-	sulfurtransferase complex subunit TusC	NA	NA	NA	NA	NA
WP_009839795.1|1823182_1823536_-	sulfurtransferase complex subunit TusD	NA	NA	NA	NA	NA
WP_009839796.1|1823592_1824261_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	46.6	2.2e-38
>prophage 4
NZ_CP011032	Pseudoalteromonas tunicata strain D2 chromosome I, complete sequence	3978968	3109280	3117556	3978968		uncultured_Mediterranean_phage(28.57%)	8	NA	NA
WP_009837615.1|3109280_3110342_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	62.2	6.1e-115
WP_009837616.1|3110408_3110900_-	nicotinamide-nucleotide amidohydrolase family protein	NA	B5TK85	Pseudomonas_phage	44.8	1.0e-24
WP_009837617.1|3110926_3113506_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	22.3	5.2e-35
WP_050760022.1|3113626_3114640_-	RNA polymerase sigma factor RpoS	NA	M4SMP8	Cyanophage	31.9	6.2e-32
WP_083781253.1|3114705_3115608_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1B0XUH3	Freshwater_phage	35.2	1.4e-06
WP_040643751.1|3115550_3116129_-	DedA family protein	NA	NA	NA	NA	NA
WP_009837621.1|3116163_3116802_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	51.2	9.0e-37
WP_009837622.1|3116785_3117556_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.0	2.2e-69
