assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002291445.1_ASM229144v1	NZ_CP014137	Brenneria goodwinii strain FRB141 chromosome, complete genome	1	146382-146487	1	CRISPRCasFinder	no		csa3,PD-DExK,DEDDh,cas3,WYL,DinG	Orphan	CAAAAAATTTCCGGGAGAAATTTTTGACGTCGC	33	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,DEDDh,cas3,WYL,DinG	NA,NA|95aa|down_8|NZ_CP014137.1_157211_157496_-	NA|522aa|up_9|NZ_CP014137.1_128749_130315_-	TIGR03248, galactar-dH20, galactarate dehydratase	NA|444aa|up_8|NZ_CP014137.1_130801_132133_+	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter	NA|257aa|up_7|NZ_CP014137.1_132209_132980_+	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional	NA|295aa|up_6|NZ_CP014137.1_133022_133907_+	PRK11559, garR, tartronate semialdehyde reductase; Provisional	NA|381aa|up_5|NZ_CP014137.1_134043_135186_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|925aa|up_4|NZ_CP014137.1_135247_138022_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|446aa|up_3|NZ_CP014137.1_138186_139524_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|744aa|up_2|NZ_CP014137.1_139715_141947_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|267aa|up_1|NZ_CP014137.1_142399_143200_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|466aa|up_0|NZ_CP014137.1_144028_145426_+	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase	NA|494aa|down_0|NZ_CP014137.1_146558_148040_+	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like	NA|370aa|down_1|NZ_CP014137.1_148453_149563_+	PRK10682, PRK10682, putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Provisional	NA|377aa|down_2|NZ_CP014137.1_149660_150791_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|320aa|down_3|NZ_CP014137.1_150804_151764_+	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|282aa|down_4|NZ_CP014137.1_151760_152606_+	PRK10592, PRK10592, putrescine transporter subunit: membrane component of ABC superfamily; Provisional	NA|546aa|down_5|NZ_CP014137.1_152731_154369_+	PRK05380, pyrG, CTP synthetase; Validated	NA|434aa|down_6|NZ_CP014137.1_154454_155756_+	PRK00077, eno, enolase; Provisional	NA|445aa|down_7|NZ_CP014137.1_155884_157219_+	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal	NA|95aa|down_8|NZ_CP014137.1_157211_157496_-	NA	NA|519aa|down_9|NZ_CP014137.1_157597_159154_+	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily
GCF_002291445.1_ASM229144v1	NZ_CP014137	Brenneria goodwinii strain FRB141 chromosome, complete genome	2	1209093-1209200	2	CRISPRCasFinder	no		csa3,PD-DExK,DEDDh,cas3,WYL,DinG	Orphan	GGGGGCGGGCAGGGATAGCCCGCCATAAAAAAAC	34	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,DEDDh,cas3,WYL,DinG	NA|86aa|up_3|NZ_CP014137.1_1206676_1206934_-,NA	NA|307aa|up_9|NZ_CP014137.1_1200968_1201889_-	PRK06860, PRK06860, lipid A biosynthesis lauroyl acyltransferase; Provisional	NA|365aa|up_8|NZ_CP014137.1_1202160_1203255_-	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain	NA|356aa|up_7|NZ_CP014137.1_1203485_1204553_+	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|192aa|up_6|NZ_CP014137.1_1204611_1205187_-	PRK03757, PRK03757, YceI family protein	NA|185aa|up_5|NZ_CP014137.1_1205215_1205770_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|85aa|up_4|NZ_CP014137.1_1206207_1206462_-	PRK12301, bssS, biofilm formation regulator BssS	NA|86aa|up_3|NZ_CP014137.1_1206676_1206934_-	NA	NA|80aa|up_2|NZ_CP014137.1_1207111_1207351_-	PRK10597, PRK10597, DNA damage-inducible protein I; Provisional	NA|348aa|up_1|NZ_CP014137.1_1207534_1208578_-	PRK05451, PRK05451, dihydroorotase; Provisional	NA|96aa|up_0|NZ_CP014137.1_1208783_1209071_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|1154aa|down_0|NZ_CP014137.1_1209241_1212703_-	PRK10811, rne, ribonuclease E; Reviewed	NA|319aa|down_1|NZ_CP014137.1_1213285_1214242_+	PRK11025, PRK11025, 23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA|196aa|down_2|NZ_CP014137.1_1214294_1214882_-	PRK00884, PRK00884, Maf-like protein; Reviewed	NA|174aa|down_3|NZ_CP014137.1_1215022_1215544_+	PRK11193, PRK11193, 23S rRNA accumulation protein YceD	NA|57aa|down_4|NZ_CP014137.1_1215560_1215731_+	PRK01110, rpmF, 50S ribosomal protein L32; Validated	NA|349aa|down_5|NZ_CP014137.1_1215760_1216807_+	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|318aa|down_6|NZ_CP014137.1_1216813_1217767_+	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|310aa|down_7|NZ_CP014137.1_1217785_1218715_+	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase	NA|245aa|down_8|NZ_CP014137.1_1218728_1219463_+	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|79aa|down_9|NZ_CP014137.1_1219617_1219854_+	PRK00982, acpP, acyl carrier protein; Provisional
GCF_002291445.1_ASM229144v1	NZ_CP014137	Brenneria goodwinii strain FRB141 chromosome, complete genome	3	1278881-1278980	3	CRISPRCasFinder	no		csa3,PD-DExK,DEDDh,cas3,WYL,DinG	Orphan	AAAAAACTTCCGGGAGAAGTTTT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,DEDDh,cas3,WYL,DinG	NA|134aa|up_0|NZ_CP014137.1_1278393_1278795_-,NA	NA|302aa|up_9|NZ_CP014137.1_1263315_1264221_+	pfam00701, DHDPS, Dihydrodipicolinate synthetase family	NA|656aa|up_8|NZ_CP014137.1_1264230_1266198_+	PRK08211, PRK08211, YjhG/YagF family D-xylonate dehydratase	NA|450aa|up_7|NZ_CP014137.1_1266282_1267632_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|274aa|up_6|NZ_CP014137.1_1267646_1268468_-	PRK05339, PRK05339, pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA|793aa|up_5|NZ_CP014137.1_1268765_1271144_+	PRK06464, PRK06464, phosphoenolpyruvate synthase; Validated	NA|347aa|up_4|NZ_CP014137.1_1271777_1272818_-	PRK10461, PRK10461, thiamine biosynthesis lipoprotein ApbE; Provisional	NA|370aa|up_3|NZ_CP014137.1_1273371_1274481_-	PRK10983, PRK10983, AI-2E family transporter YdiK	NA|1018aa|up_2|NZ_CP014137.1_1274773_1277827_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|139aa|up_1|NZ_CP014137.1_1277826_1278243_+	PRK10293, PRK10293, 1,4-dihydroxy-2-naphthoyl-CoA hydrolase	NA|134aa|up_0|NZ_CP014137.1_1278393_1278795_-	NA	NA|124aa|down_0|NZ_CP014137.1_1279346_1279718_+	PRK09504, sufA, iron-sulfur cluster assembly scaffold protein; Provisional	NA|499aa|down_1|NZ_CP014137.1_1279731_1281228_+	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|249aa|down_2|NZ_CP014137.1_1281306_1282053_+	PRK09580, sufC, cysteine desulfurase ATPase component; Reviewed	NA|446aa|down_3|NZ_CP014137.1_1282027_1283365_+	PRK10948, PRK10948, Fe-S cluster assembly protein SufD	NA|408aa|down_4|NZ_CP014137.1_1283361_1284585_+	PRK09295, PRK09295, cysteine desulfurase SufS	NA|139aa|down_5|NZ_CP014137.1_1284615_1285032_+	PRK09296, PRK09296, cysteine desulfuration protein SufE	NA|341aa|down_6|NZ_CP014137.1_1285500_1286523_+	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|79aa|down_7|NZ_CP014137.1_1286696_1286933_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|down_8|NZ_CP014137.1_1287237_1288650_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|282aa|down_9|NZ_CP014137.1_1289276_1290122_+	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional
GCF_002291445.1_ASM229144v1	NZ_CP014137	Brenneria goodwinii strain FRB141 chromosome, complete genome	4	3297053-3297149	4	CRISPRCasFinder	no		csa3,PD-DExK,DEDDh,cas3,WYL,DinG	Orphan	GGTGGCGGGTAGGGACAGCCCGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,DEDDh,cas3,WYL,DinG	NA,NA	NA|149aa|up_9|NZ_CP014137.1_3284478_3284925_+	PRK00124, PRK00124, YaiI/YqxD family protein	NA|760aa|up_8|NZ_CP014137.1_3285119_3287399_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|192aa|up_7|NZ_CP014137.1_3287666_3288242_-	PRK15009, PRK15009, GDP-mannose pyrophosphatase NudK; Provisional	NA|290aa|up_6|NZ_CP014137.1_3288285_3289155_-	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold	NA|622aa|up_5|NZ_CP014137.1_3289647_3291513_+	pfam13454, NAD_binding_9, FAD-NAD(P)-binding	NA|68aa|up_4|NZ_CP014137.1_3291625_3291829_+	COG1942, COG1942, Uncharacterized protein, 4-oxalocrotonate tautomerase homolog [General function prediction only]	NA|413aa|up_3|NZ_CP014137.1_3291871_3293110_-	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|194aa|up_2|NZ_CP014137.1_3293591_3294173_-	PRK14150, PRK14150, heat shock protein GrpE; Provisional	NA|293aa|up_1|NZ_CP014137.1_3294305_3295184_+	PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional	NA|554aa|up_0|NZ_CP014137.1_3295269_3296931_+	PRK10869, PRK10869, recombination and repair protein; Provisional	NA|112aa|down_0|NZ_CP014137.1_3297265_3297601_+	PRK11548, PRK11548, outer membrane protein assembly factor BamE	NA|95aa|down_1|NZ_CP014137.1_3297714_3297999_-	PRK01777, PRK01777, RnfH family protein	NA|145aa|down_2|NZ_CP014137.1_3297991_3298426_-	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin	NA|161aa|down_3|NZ_CP014137.1_3298581_3299064_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|414aa|down_4|NZ_CP014137.1_3299782_3301024_+	PRK09692, PRK09692, integrase; Provisional	NA|82aa|down_5|NZ_CP014137.1_3301259_3301505_+	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|292aa|down_6|NZ_CP014137.1_3302296_3303172_+	pfam12835, Integrase_1, Integrase	NA|535aa|down_7|NZ_CP014137.1_3303466_3305071_+	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system	NA|84aa|down_8|NZ_CP014137.1_3306077_3306329_+	PRK09778, PRK09778, type I toxin-antitoxin system antitoxin YafN	NA|95aa|down_9|NZ_CP014137.1_3306318_3306603_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]
GCF_002291445.1_ASM229144v1	NZ_CP014137	Brenneria goodwinii strain FRB141 chromosome, complete genome	5	3668201-3668298	5	CRISPRCasFinder	no		csa3,PD-DExK,DEDDh,cas3,WYL,DinG	Orphan	TAAAAAATCGTCAGGAACGATTTT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,PD-DExK,DEDDh,cas3,WYL,DinG	NA,NA	NA|240aa|up_9|NZ_CP014137.1_3656770_3657490_-	COG2977, EntD, Phosphopantetheinyl transferase component of siderophore synthetase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|422aa|up_8|NZ_CP014137.1_3657587_3658853_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|279aa|up_7|NZ_CP014137.1_3659166_3660003_-	PRK11449, PRK11449, metal-dependent hydrolase	NA|63aa|up_6|NZ_CP014137.1_3660082_3660271_-	PRK10428, PRK10428, hypothetical protein; Provisional	NA|54aa|up_5|NZ_CP014137.1_3660516_3660678_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|205aa|up_4|NZ_CP014137.1_3660826_3661441_-	PRK10568, PRK10568, molecular chaperone OsmY	NA|530aa|up_3|NZ_CP014137.1_3662349_3663939_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|259aa|up_2|NZ_CP014137.1_3664178_3664955_+	PRK01683, PRK01683, trans-aconitate 2-methyltransferase; Provisional	NA|229aa|up_1|NZ_CP014137.1_3664976_3665663_-	PRK11246, PRK11246, YtjB family periplasmic protein	NA|326aa|up_0|NZ_CP014137.1_3665822_3666800_+	PRK11133, serB, phosphoserine phosphatase; Provisional	NA|411aa|down_0|NZ_CP014137.1_3668405_3669638_+	PRK08099, PRK08099, multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	NA|205aa|down_1|NZ_CP014137.1_3669766_3670381_-	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional	NA|110aa|down_2|NZ_CP014137.1_3670684_3671014_-	PRK10972, PRK10972, cell division protein ZapA	NA|195aa|down_3|NZ_CP014137.1_3671327_3671912_+	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|439aa|down_4|NZ_CP014137.1_3671935_3673252_+	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|393aa|down_5|NZ_CP014137.1_3673299_3674478_+	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|404aa|down_6|NZ_CP014137.1_3674494_3675706_+	PRK08013, PRK08013, oxidoreductase; Provisional	NA|103aa|down_7|NZ_CP014137.1_3675970_3676279_+	PRK07075, PRK07075, isochorismate lyase	NA|376aa|down_8|NZ_CP014137.1_3676414_3677542_+	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|346aa|down_9|NZ_CP014137.1_3677649_3678687_-	COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]
