The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	37010	79601	4107500	tRNA,transposase	Synechococcus_phage(25.0%)	40	NA	NA
WP_010929585.1|37010_37922_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_003814404.1|40057_40597_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40600_41329_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41315_42209_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42279_42675_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42684_43215_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43343_43643_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43660_44611_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45197_45746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45717_45954_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46081_46975_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48144_49392_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49388_50003_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50138_51089_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51131_52388_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53619_54354_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54359_54950_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54974_55664_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55660_56422_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56501_57401_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57494_58445_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59245_60472_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60471_60891_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61074_62016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62439_63414_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63470_64052_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64064_64367_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64485_65544_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65578_66850_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67479_68661_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69082_70033_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816713.1|70126_70441_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|71633_73541_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|73702_74323_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|74354_74936_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|75024_75276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|75277_76120_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|76225_77635_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|77631_78582_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78656_79601_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	232662	371042	4107500	tRNA,integrase,transposase	uncultured_Mediterranean_phage(10.34%)	116	280693:280710	325333:325350
WP_010929591.1|232662_233613_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931563.1|233609_234800_-	voltage-gated potassium channel protein	NA	NA	NA	NA	NA
WP_010931562.1|234921_235686_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
WP_003807735.1|235772_236876_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_010931561.1|237067_238084_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815102.1|238365_238854_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_003817656.1|240197_240878_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_010931560.1|240939_241791_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_010931559.1|241787_242585_-	thiazole synthase	NA	NA	NA	NA	NA
WP_010931558.1|242688_243582_-	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931557.1|243593_245483_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931556.1|245819_249593_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010929826.1|250847_251540_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_003818232.1|251913_252414_-	SET domain-containing protein	NA	NA	NA	NA	NA
WP_023853391.1|252520_253441_+	bestrophin	NA	NA	NA	NA	NA
WP_010929823.1|253457_253934_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929822.1|254027_255878_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929821.1|255933_256692_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929820.1|256719_258153_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003818225.1|258226_259006_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929819.1|259018_259852_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_020699616.1|259860_260631_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929818.1|260630_261695_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929817.1|261846_264474_-	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929816.1|264537_267159_+	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_003815964.1|268086_268545_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929815.1|268823_271067_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_010929814.1|271263_273288_-	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929813.1|273411_274374_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929812.1|274585_275725_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929811.1|275747_276713_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_004565905.1|276908_278099_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_003815955.1|278112_278358_+	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_010929810.1|278386_280408_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815953.1|280454_282062_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
280693:280710	attL	ACGGTGGCCAGCACGCTG	NA	NA	NA	NA
WP_010929808.1|282162_283332_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|286213_287164_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|287187_288246_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|288320_288695_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|289249_290200_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929833.1|291756_292602_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|292689_293853_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|294271_295243_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|295281_296709_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|296828_297620_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|297738_300192_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_010929839.1|300286_301396_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.2e-41
WP_010929554.1|301398_302808_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|303213_303348_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|303443_303815_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|303811_304084_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|304132_305824_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|306054_307005_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929840.1|307462_308386_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814626.1|308394_308793_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929841.1|309034_311005_+	DUF3220 domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|312491_313481_+|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010926403.1|313477_313678_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929845.1|313790_314132_-	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	45.3	1.0e-10
WP_019247983.1|314142_315327_-	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_010929847.1|315363_315891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929848.1|315948_316596_-	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929849.1|316592_317579_-	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010926410.1|317582_317765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926411.1|317761_318139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929850.1|318372_318840_-	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010929851.1|318875_319826_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010926414.1|319924_320167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929852.1|320333_320975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|320985_321936_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248860.1|322045_322441_-	RidA family protein	NA	NA	NA	NA	NA
WP_010929854.1|322610_323312_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010929855.1|323575_324436_+	hypothetical protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
WP_003807743.1|324510_324846_-	YegP family protein	NA	NA	NA	NA	NA
WP_010929856.1|324986_326132_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
325333:325350	attR	ACGGTGGCCAGCACGCTG	NA	NA	NA	NA
WP_010929857.1|326159_326819_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010929858.1|327823_328030_+	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
WP_003807750.1|328295_328427_+	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_094145972.1|328873_335776_+	autotransporter BatB	NA	NA	NA	NA	NA
WP_023853476.1|335827_336409_+	ureidoglycolate lyase	NA	NA	NA	NA	NA
WP_010929862.1|336681_337659_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929863.1|337693_339247_+	acyl--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	1.5e-13
WP_010929864.1|339254_339995_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929865.1|340018_340783_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003807759.1|340827_341163_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_023853484.1|341216_342146_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|342105_343056_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929866.1|343174_344119_-	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_003816336.1|344115_345357_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_005013747.1|345518_346469_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807322.1|346465_347140_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929867.1|347224_348220_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929868.1|348374_349664_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003807315.1|349915_350107_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_003807313.1|350213_351533_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_010929869.1|351603_352173_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929870.1|352353_352941_+	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.1e-07
WP_010929871.1|352947_353550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818481.1|353546_354203_+	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929872.1|354199_354826_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_010929873.1|354848_355787_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_005013747.1|355852_356803_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807300.1|356901_357414_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_003818477.1|357515_358766_-	kynureninase	NA	NA	NA	NA	NA
WP_023853429.1|358902_359388_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929874.1|359488_360601_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_003807291.1|360714_361623_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929875.1|361765_362242_+	membrane protein	NA	NA	NA	NA	NA
WP_003807287.1|362276_363293_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929876.1|363406_364648_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_010929877.1|365781_366747_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807278.1|366793_367285_-	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_003818466.1|367380_368280_-	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_010929878.1|368409_369045_+	LysE family transporter	NA	NA	NA	NA	NA
WP_005013747.1|369041_369992_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|370091_371042_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	489368	607262	4107500	tRNA,transposase	Acinetobacter_phage(22.22%)	101	NA	NA
WP_005012067.1|489368_490319_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929956.1|490417_491368_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929957.1|492090_493365_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_003807618.1|493451_494534_+	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929958.1|494544_495357_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|495393_495720_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_003807624.1|495724_496285_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_003819054.1|496525_497518_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929960.1|497536_498532_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_023853194.1|498547_499924_+	FAD binding domain in molybdopterin dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929962.1|499916_502298_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_019247263.1|502314_502704_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_020699695.1|502830_503061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|503165_504116_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929963.1|504214_505165_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_003815183.1|505161_506034_-	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929964.1|506964_508251_+	cytochrome c	NA	NA	NA	NA	NA
WP_010929965.1|508304_509231_-	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929966.1|509249_509705_-	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_003815177.1|510556_511348_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815175.1|511379_512000_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_010929967.1|511996_512626_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815172.1|512638_513247_-	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_003815171.1|513243_514233_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_010929968.1|514338_515553_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_010929969.1|517504_518455_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929970.1|519888_521175_+	membrane protein	NA	NA	NA	NA	NA
WP_010929971.1|521340_521649_+	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446243.1|521670_522315_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_003807038.1|522355_524146_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_010929972.1|524258_525119_+	endonuclease	NA	NA	NA	NA	NA
WP_010929973.1|525115_526321_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929974.1|526317_527202_-	DMT family transporter	NA	NA	NA	NA	NA
WP_033446233.1|528718_529153_-	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_014905478.1|529115_530114_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931408.1|530225_531371_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931407.1|531445_532774_+	amidase	NA	NA	NA	NA	NA
WP_003815296.1|532807_533398_-	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931406.1|533687_534482_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249391.1|535651_536386_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931404.1|536392_537259_-	copper resistance protein B	NA	NA	NA	NA	NA
WP_010931403.1|537266_539042_-	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_029443756.1|539084_539582_-	cupredoxin family protein	NA	NA	NA	NA	NA
WP_005013747.1|539878_540829_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|540927_541878_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931400.1|542218_543169_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931399.1|545492_546641_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931398.1|546685_547309_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931397.1|547461_548454_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003815313.1|548450_549188_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003815315.1|549267_550089_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931396.1|550177_551041_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815317.1|551167_551404_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931395.1|553378_554413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003817805.1|554471_555449_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931394.1|555456_556377_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852622.1|556373_558074_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931393.1|558076_558982_+	hydrolase	NA	NA	NA	NA	NA
WP_010931392.1|559025_560159_+	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_005012808.1|560287_561238_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931391.1|561336_563406_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_019247688.1|563448_565551_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931389.1|565857_566934_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_010931388.1|567009_567894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815341.1|568076_568499_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931387.1|568508_569909_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003817813.1|569951_570857_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931386.1|570955_572497_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003815348.1|572531_573071_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931385.1|573083_573554_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815363.1|573691_573934_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_003815364.1|574050_574932_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815365.1|575004_575325_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_023852617.1|576176_577127_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|578449_579226_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|579260_581033_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|581034_581937_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|582061_582421_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|582452_583415_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_010929969.1|583513_584464_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|584476_585412_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|585471_586311_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|586307_587477_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|587473_588763_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|588805_589180_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_023852620.1|589294_590023_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|590030_590735_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|590998_592519_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|592574_593138_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|593156_594188_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|594184_594973_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_023997720.1|595148_596138_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|597894_598845_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|600067_600970_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|600971_601826_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|601872_602982_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|602992_603511_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|603540_604173_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|604244_604904_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_023852703.1|604900_606040_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|606389_607262_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	611676	675509	4107500	tRNA,transposase	Pandoravirus(12.5%)	47	NA	NA
WP_010931363.1|611676_612693_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|612964_613591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931367.1|613646_614774_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|614779_620497_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814277.1|621064_622009_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|622197_623133_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|623250_624822_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|624901_626110_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|626607_627525_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|629885_630107_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|630437_631454_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|631538_631790_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|631793_632609_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|632721_633600_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|633711_635475_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931361.1|635590_636931_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010927010.1|638000_639425_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003814239.1|639424_640126_-	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010930179.1|641630_642581_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994844.1|642676_643648_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|643652_644333_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|644470_644863_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|644970_645987_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|646226_647012_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|647106_648516_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|648526_649327_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|649347_650118_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010931354.1|650160_650628_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|650624_651575_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|653523_654402_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|655328_658307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|658660_659611_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|659607_660696_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|660731_661595_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931351.1|662734_663124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486103.1|663127_663910_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_047122778.1|663943_664729_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|665004_666144_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|666140_666932_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|666928_667678_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|667674_668547_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|668546_669548_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|669544_670708_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003808193.1|670733_671417_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|671370_672705_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|672697_673792_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929591.1|674558_675509_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	694420	771729	4107500	protease,tRNA,integrase,transposase	Bacillus_phage(20.0%)	58	741557:741575	761445:761463
WP_023995489.1|694420_695371_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931335.1|695469_696945_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931334.1|698532_699420_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931333.1|699422_700364_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931332.1|700409_701975_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931331.1|703752_705078_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931330.1|705260_706718_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	21.1	7.6e-15
WP_003816386.1|706681_707179_-	dihydrofolate reductase	NA	A0A140HLG8	Bacillus_phage	38.9	3.0e-24
WP_010931328.1|707209_708181_-	thymidylate synthase	NA	J7KKN7	Erwinia_phage	33.3	4.8e-50
WP_023994724.1|708233_708665_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931327.1|708794_709463_+	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_003808448.1|710191_711295_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_010931326.1|711400_712675_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930472.1|712686_713712_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010931325.1|713713_715084_+	membrane protein	NA	NA	NA	NA	NA
WP_010931324.1|715084_716221_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931323.1|716267_718193_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A2K9R7N5	Dishui_lake_phycodnavirus	29.0	1.0e-27
WP_010931322.1|718189_719311_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010931321.1|719307_720462_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_010931320.1|720458_721589_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_003808462.1|721596_723162_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_010931319.1|723168_724551_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	31.6	6.2e-51
WP_003808465.1|724829_725441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931317.1|725532_726948_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818936.1|726965_727676_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010931316.1|727672_728995_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_010931315.1|729074_731036_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_003818932.1|731161_732475_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_003818930.1|732583_733882_-	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_010931314.1|734064_734973_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808487.1|734982_735192_-	DUF2783 domain-containing protein	NA	NA	NA	NA	NA
WP_003808489.1|735203_736883_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931313.1|736984_737938_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010925978.1|738028_738856_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	NA	NA	NA	NA
WP_010931312.1|738854_740741_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003818921.1|740737_741337_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_010931311.1|741385_742285_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
741557:741575	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_010931310.1|742493_743444_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	35.5	7.3e-43
WP_029443719.1|743566_744181_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_010931308.1|744309_744906_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|744902_745685_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|745757_746849_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|747128_748256_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|748597_749644_+	Fic family protein	NA	NA	NA	NA	NA
WP_019247951.1|750154_752911_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_023994585.1|752912_755864_+	DNA methylase	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|755879_757091_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_076879586.1|757087_757288_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|757274_758225_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|758241_758736_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|758739_758997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248455.1|759540_760452_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_029443992.1|760533_760818_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|761601_762552_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
761445:761463	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|762970_765535_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|765579_767433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905963.1|767765_769337_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|770778_771729_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	1018709	1120051	4107500	tRNA,transposase	Bacillus_virus(27.27%)	92	NA	NA
WP_003813026.1|1018709_1019825_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_003813022.1|1019925_1020744_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010931185.1|1020841_1021453_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010931184.1|1021612_1022989_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.5	2.2e-109
WP_003813017.1|1023051_1023510_+	cytochrome c	NA	NA	NA	NA	NA
WP_003813013.1|1023594_1024290_-	cytochrome b561	NA	NA	NA	NA	NA
WP_003813010.1|1024351_1024633_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931182.1|1025195_1025948_+	DUF3053 domain-containing protein	NA	NA	NA	NA	NA
WP_003813006.1|1025992_1027069_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005012067.1|1027065_1028016_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1028118_1028781_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1028875_1029046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1029398_1030400_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1030402_1031599_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1031619_1032423_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_019247598.1|1032503_1032800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1032830_1033394_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1033434_1034292_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1034299_1035049_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1035070_1035943_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1035971_1036751_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1036784_1037582_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003808978.1|1040236_1040629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1040622_1041483_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1041486_1042449_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1043225_1043915_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1044775_1045726_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1046075_1046945_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1047015_1047711_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1047700_1048210_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1048206_1049427_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1049374_1050277_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023997744.1|1051162_1052449_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1052487_1053861_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1053899_1054601_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1054899_1055889_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1055989_1056451_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1056466_1057015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931172.1|1057156_1058632_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1058737_1059829_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1059832_1060615_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1060624_1061413_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1062538_1062973_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1062969_1063980_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1064023_1064950_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1065236_1065605_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_023853143.1|1065821_1066772_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1066816_1069243_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1069291_1069984_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1070056_1071256_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1071273_1072179_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1072294_1073224_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1073249_1074596_+	MFS transporter	NA	NA	NA	NA	NA
WP_019247888.1|1074608_1075373_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.5	3.1e-12
WP_010931159.1|1075386_1076169_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1076361_1077312_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931158.1|1077373_1078483_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1078995_1079832_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931157.1|1079958_1080867_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1080863_1081814_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|1082199_1082742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1083777_1084728_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1084969_1085338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1085383_1086508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820818.1|1087642_1088383_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1088486_1089107_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1089210_1090161_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1090157_1092266_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1092410_1093070_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1093101_1093566_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1093841_1094027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1094078_1094831_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1094837_1096100_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1096141_1097380_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1098456_1099584_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1099594_1100422_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1100408_1101275_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1102641_1103046_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446288.1|1103408_1104320_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1104334_1105045_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1105041_1106286_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1106287_1106722_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1106750_1107056_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005012067.1|1107154_1108105_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|1108161_1109310_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1109390_1110341_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1110872_1111670_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1111717_1112371_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1112327_1113416_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1113580_1115806_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1118083_1118980_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|1119100_1120051_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	1150437	1221406	4107500	protease,transposase	uncultured_Mediterranean_phage(25.0%)	53	NA	NA
WP_005012808.1|1150437_1151388_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1151444_1152557_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1154940_1155891_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1156481_1157258_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1157375_1157639_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1157739_1158744_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1158944_1160546_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1160571_1161330_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1161421_1162078_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1162168_1162933_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1162942_1163131_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1163186_1164230_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1164226_1164640_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1164636_1165257_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1165537_1166488_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1166655_1168047_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1168119_1168698_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1168814_1170212_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1170327_1171533_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1171632_1172151_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1172245_1172491_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1172718_1173033_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_023853340.1|1173131_1178312_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1178308_1180477_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931114.1|1180532_1182848_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_003820402.1|1182852_1184172_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1184190_1185864_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1185868_1186537_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1186693_1190515_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_005015810.1|1190845_1191796_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1191817_1192963_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1193111_1194041_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1194037_1195126_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1195122_1195926_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1195922_1196654_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1196711_1198001_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1198097_1198700_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_077069211.1|1198939_1201924_+	autotransporter BapC	NA	NA	NA	NA	NA
WP_003812839.1|1203252_1203591_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1204298_1204565_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1206270_1207221_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1207217_1208549_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931102.1|1209809_1211810_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1211802_1212444_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1212440_1212848_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1212844_1213645_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1213719_1214424_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1214455_1215250_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_005013747.1|1215246_1216197_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995489.1|1216295_1217246_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1217344_1217779_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1217861_1220198_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1220389_1221406_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	1469059	1521212	4107500	tRNA,transposase	Salmonella_phage(25.0%)	44	NA	NA
WP_005013747.1|1469059_1470010_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814065.1|1470176_1470530_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1470542_1470905_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1470946_1471372_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1471574_1472831_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1473029_1474010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1474159_1475401_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1475499_1476450_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1476458_1477154_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1479975_1480575_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1480585_1482751_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1482774_1484559_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1484558_1484648_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1485342_1485615_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1485614_1487681_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1487677_1488628_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1488726_1489677_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1489792_1490125_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1490121_1490808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1490794_1491754_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010930947.1|1491786_1494156_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1494155_1494788_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1494889_1496230_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1496276_1497632_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_005014990.1|1497922_1498159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1498346_1498664_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1498936_1499452_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814021.1|1499722_1500478_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1500816_1501023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1501030_1501690_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1501984_1504189_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1504299_1505523_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1505645_1506620_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1506687_1507881_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1507895_1508696_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1508692_1510549_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1510545_1511151_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1511169_1512555_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1513280_1514507_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1514595_1515378_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1515476_1516427_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1516453_1517227_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1517238_1518480_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1520261_1521212_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	1565136	1633222	4107500	tRNA,transposase	Streptococcus_virus(11.11%)	57	NA	NA
WP_010930416.1|1565136_1565625_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1565742_1566321_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1566426_1566795_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1566893_1567844_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1567850_1568963_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1569649_1570852_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1571055_1573716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1573728_1577133_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1577800_1580026_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1580072_1580399_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1580449_1581058_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1581156_1582107_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1582176_1582941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1582937_1583474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1583640_1584492_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1584551_1585178_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1585174_1586125_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1586223_1587336_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1587325_1588327_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1588432_1589944_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1589940_1591245_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1591356_1591917_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1592184_1592739_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1593194_1593410_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1593664_1596262_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1596258_1597446_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1598104_1598719_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1598807_1599929_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1599946_1600852_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1601744_1602695_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1602876_1603629_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1603697_1604357_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1604353_1605082_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1605094_1607374_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1607398_1607602_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1607643_1608276_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1608411_1609329_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1609325_1610039_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1610276_1611047_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1611051_1611651_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1611895_1613386_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1613444_1613729_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1614294_1615221_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1615357_1616098_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1616264_1617641_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1617822_1618728_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1620379_1622182_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1622299_1622950_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1623048_1623999_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1624020_1625241_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1625426_1626839_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1626902_1627970_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1627969_1629457_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1629466_1630411_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1630570_1631269_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1631346_1632252_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1632271_1633222_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	1669171	1724762	4107500	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
WP_005013747.1|1669171_1670122_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1670180_1670954_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1670946_1672503_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1672499_1673450_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1674776_1675379_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1675618_1676320_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1676313_1677096_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1677280_1678231_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1678329_1679067_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1679256_1680015_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1680061_1681051_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1681228_1682197_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1683736_1684705_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1684713_1685655_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1686128_1687139_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1687129_1688644_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1688640_1689987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1689989_1691024_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1691073_1692699_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1693251_1694202_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1694306_1695254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1695307_1697122_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1697114_1697789_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1697918_1700993_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1701006_1701306_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1701620_1702244_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1702487_1703357_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1703334_1704279_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1704364_1705291_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1705403_1706183_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1706173_1707370_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1707400_1708351_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1708572_1709262_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1709326_1710082_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1710133_1711126_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1711135_1712089_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1712204_1713167_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1714568_1714997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1714993_1715944_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1716237_1716960_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1717398_1718586_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1718589_1718940_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1720689_1721661_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1721674_1722388_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1722392_1723310_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1723416_1723713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1723811_1724762_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	2007302	2060541	4107500	transposase	Erysipelothrix_phage(33.33%)	45	NA	NA
WP_010930730.1|2007302_2008253_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2009123_2009996_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2010073_2011213_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930733.1|2011571_2012828_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2012833_2013361_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2013365_2014184_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2014183_2014906_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2014927_2015242_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010930736.1|2015259_2016408_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2016438_2017314_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2017310_2018630_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2018702_2019899_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2019909_2021397_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2023991_2024891_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2025028_2025994_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005013747.1|2027263_2028214_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812024.1|2028210_2028513_-	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_003812026.1|2028672_2029077_+	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_010930743.1|2029069_2030296_+	NnrS family protein	NA	NA	NA	NA	NA
WP_003812030.1|2030292_2030739_+	membrane protein	NA	NA	NA	NA	NA
WP_003812032.1|2030808_2031591_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_010930744.1|2031632_2033138_+	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247851.1|2033423_2034257_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930745.1|2035694_2036516_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930746.1|2036534_2037389_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_003812044.1|2037392_2038364_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247855.1|2039048_2039225_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|2039710_2040661_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2041798_2042095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2042269_2043622_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2043764_2044781_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2046760_2047774_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2047860_2048766_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2048922_2049267_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2049424_2049883_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2049896_2052113_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2052109_2053171_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2053199_2054174_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2054125_2054944_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2054956_2055565_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2055739_2056135_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2056153_2057593_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2057621_2057969_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2057987_2058938_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2059590_2060541_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	2081234	2121862	4107500	protease,tRNA,transposase	Klosneuvirus(14.29%)	41	NA	NA
WP_005012067.1|2081234_2082185_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_162268681.1|2082202_2082343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930769.1|2083157_2083517_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2083504_2084941_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2084937_2085591_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930772.1|2085587_2086781_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2086884_2088159_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2088155_2089106_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930774.1|2089272_2090247_+	membrane protein	NA	NA	NA	NA	NA
WP_003810379.1|2090243_2090387_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_003810383.1|2092008_2092671_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003818560.1|2092673_2092850_+	cytochrome oxidase	NA	NA	NA	NA	NA
WP_010930775.1|2092846_2093785_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_010930776.1|2093876_2095367_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930777.1|2095452_2095605_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930778.1|2095618_2095858_+	membrane protein	NA	NA	NA	NA	NA
WP_010930779.1|2095953_2096697_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_019248115.1|2096705_2097230_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930781.1|2097328_2098252_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_003810400.1|2098248_2099010_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930782.1|2099025_2100111_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_005013747.1|2100310_2101261_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2101359_2102310_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2102269_2102683_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2102967_2103267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930783.1|2103676_2105959_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.2e-36
WP_124740709.1|2106424_2106619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2106644_2108675_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2108694_2108907_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2109184_2109724_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023852902.1|2109837_2111133_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2111209_2112367_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2112550_2113450_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2113468_2114773_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2114738_2115845_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2115932_2116169_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2116307_2117378_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2117381_2118737_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_023852925.1|2118763_2119921_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2119926_2120565_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_033446258.1|2120566_2121862_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
>prophage 14
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	2168783	2234331	4107500	protease,tRNA,transposase	Lake_Baikal_phage(20.0%)	58	NA	NA
WP_010929577.1|2168783_2169734_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|2169934_2170744_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005013747.1|2170868_2171819_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2171815_2172709_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2172833_2173028_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2173027_2173369_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2173378_2175241_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2175370_2175883_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2175885_2176209_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2176210_2176621_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2176658_2177870_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2177887_2178400_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2178615_2179107_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2179359_2181396_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2181473_2182676_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010930566.1|2182804_2183455_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
WP_005012067.1|2185012_2185963_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2186533_2186746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2186763_2187495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2187529_2188171_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010930565.1|2188163_2188832_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2191044_2191821_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2191842_2193000_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2192996_2193428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930562.1|2193424_2194222_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930561.1|2194241_2194643_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2194709_2195681_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2195746_2196970_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2197197_2198148_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2198271_2200725_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2200913_2202218_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2202322_2202976_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2202978_2204289_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|2204467_2205046_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2205157_2205358_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2205703_2206270_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2206353_2206557_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2206863_2207184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2207225_2207507_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2207581_2208838_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2209220_2209550_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2211120_2211942_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2211941_2213081_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2213087_2213984_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_033446179.1|2213998_2215906_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2216265_2218878_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2218930_2221231_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2221227_2222436_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|2222697_2223072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2223068_2224019_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2224116_2226111_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2226170_2227136_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2227125_2229987_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2229989_2230496_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2230600_2231809_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2231810_2232749_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2232910_2233384_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2233380_2234331_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	2529024	2587267	4107500	tRNA,transposase	Planktothrix_phage(28.57%)	53	NA	NA
WP_005012067.1|2529024_2529975_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2530454_2531111_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2531125_2532793_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2532795_2533425_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2533636_2534731_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2534875_2535688_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_010930383.1|2535691_2537275_-	membrane protein	NA	NA	NA	NA	NA
WP_010930382.1|2537445_2538576_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2538762_2539839_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2539920_2540571_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2540585_2541989_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2542272_2543091_-	solute-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2543087_2543792_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2544691_2545807_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2545840_2546215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2546237_2547395_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2547407_2547641_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2548275_2551245_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2551259_2551469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2551620_2552250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023994978.1|2552246_2554304_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2554360_2555041_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2555037_2555598_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2555604_2556702_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2556854_2557448_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2557444_2558737_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2558750_2559293_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2559302_2560139_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2560172_2561234_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2561275_2562328_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2562343_2562646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2562787_2563738_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930368.1|2563916_2565611_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2565607_2566693_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2566740_2567640_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2567650_2568295_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2569316_2572559_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2572569_2573724_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2573950_2574913_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_005013747.1|2575011_2575962_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2576059_2577010_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2577019_2577709_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2577768_2578206_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2578251_2579145_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2579192_2580365_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2580361_2581516_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2581712_2582063_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2582052_2582487_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2582503_2583454_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2583601_2584069_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2584049_2585207_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2585272_2586199_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2586316_2587267_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	2899107	2980384	4107500	tRNA,transposase	Planktothrix_phage(16.67%)	59	NA	NA
WP_005012067.1|2899107_2900058_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2900054_2900957_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2901044_2901803_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023853245.1|2901815_2902907_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2903004_2904432_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2904661_2905876_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2905921_2908792_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2911202_2911691_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2911816_2914513_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2914667_2916950_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930199.1|2917114_2917747_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930198.1|2917845_2918796_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2918842_2919397_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2919464_2920310_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2920379_2921348_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930196.1|2925042_2928969_-	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_162290921.1|2929259_2929613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930194.1|2929705_2932936_-	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010928340.1|2933217_2934045_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_003812422.1|2934078_2934774_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_019247537.1|2934766_2936047_-	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930192.1|2936056_2937034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930191.1|2937015_2938716_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010926448.1|2938818_2939922_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010926447.1|2939952_2940708_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930190.1|2940714_2942235_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2942277_2942580_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2942576_2943209_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2943287_2945153_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_020699602.1|2945149_2945944_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930186.1|2945972_2947088_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2947992_2948871_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2948870_2949695_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2949862_2950813_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930183.1|2951025_2953875_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010930182.1|2953856_2954585_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2954725_2956189_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2956185_2956557_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2956574_2957888_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2957924_2958383_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2958495_2959446_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2959442_2960456_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2960595_2961582_+	homoserine kinase	NA	NA	NA	NA	NA
WP_161633091.1|2961940_2962648_-	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|2963228_2964179_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809618.1|2964330_2964933_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2964951_2965584_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_162096758.1|2965628_2965880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930174.1|2965821_2967708_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|2967726_2968569_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|2968565_2969924_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|2970144_2970939_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|2971169_2972663_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|2972898_2974980_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|2975174_2976215_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|2976349_2977366_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|2977387_2978245_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|2978289_2979066_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_005013747.1|2979433_2980384_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	2989452	3029152	4107500	tRNA,holin,transposase	uncultured_Mediterranean_phage(60.0%)	35	NA	NA
WP_003819794.1|2989452_2989866_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2989906_2990224_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2990308_2991025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2991288_2992710_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_005015810.1|2995381_2996332_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633096.1|2996311_2996566_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853536.1|2996904_2997921_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2998256_2998898_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2998988_3000425_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|3000582_3001656_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_010930155.1|3001652_3002789_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_003809416.1|3002933_3003278_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930154.1|3003344_3005225_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809411.1|3005274_3006210_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010931363.1|3006542_3007559_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|3008496_3009924_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|3009920_3010943_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|3010932_3011406_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930149.1|3011546_3012434_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|3012430_3014074_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_003819773.1|3014070_3015078_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|3015908_3016925_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|3017024_3017657_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|3017665_3018055_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|3018107_3019160_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_023995045.1|3020023_3020788_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_003811919.1|3020861_3021362_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3021376_3023434_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3023460_3023754_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3023855_3024803_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3024815_3025691_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3025811_3026372_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3026406_3026730_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3027165_3027903_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3028201_3029152_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	3050103	3190671	4107500	transposase	Bacillus_virus(11.11%)	114	NA	NA
WP_010929969.1|3050103_3051054_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929584.1|3051152_3052103_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3052145_3053321_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3053542_3055333_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3055345_3057007_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3057019_3059725_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3060017_3061772_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3061768_3062395_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3062391_3063243_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930125.1|3063372_3065433_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_010930124.1|3065619_3066234_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3066379_3066631_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3066700_3068083_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3068079_3071259_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3072066_3072984_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3073035_3073767_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3073826_3074399_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3075907_3076924_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3077061_3078111_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3078215_3079166_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3079261_3079987_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3080197_3080578_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3080883_3081756_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3081763_3082144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3082297_3083572_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3085059_3085968_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3086765_3087830_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_003821528.1|3089666_3090701_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3090890_3091532_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3091614_3093441_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3093684_3094614_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3094613_3095363_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3095434_3096349_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3096368_3097514_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3097574_3098486_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3098566_3099517_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3099615_3100200_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3100234_3101224_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3101220_3102162_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3102158_3103379_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3103421_3103736_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3103927_3104287_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930101.1|3104288_3106004_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3106191_3106863_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3106877_3108206_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3108202_3109102_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3109188_3110274_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_023852687.1|3110266_3111397_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
WP_010930095.1|3111399_3114081_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3114451_3115033_+	OmpA family protein	NA	NA	NA	NA	NA
WP_010930093.1|3115158_3115884_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930092.1|3115880_3116558_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3116773_3117955_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3118727_3118910_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3118939_3119890_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566317.1|3120019_3120412_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3120688_3121600_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3121724_3122699_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3122695_3123646_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3123744_3124830_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3124927_3125338_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3125953_3127867_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3128002_3130615_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3130616_3131351_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3131514_3132696_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3132692_3132905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3132901_3133882_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3133927_3134755_-	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_023852913.1|3134904_3136719_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3136773_3137157_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3137153_3138104_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3138216_3138468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810837.1|3138661_3138877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3138973_3140092_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3140211_3140424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3140583_3140805_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3140857_3141808_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930062.1|3142984_3144355_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_010930061.1|3144387_3145179_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930060.1|3145191_3146247_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019247557.1|3146272_3147148_-	amidohydrolase	NA	NA	NA	NA	NA
WP_023852826.1|3147253_3147502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819989.1|3147536_3148991_-	carboxylase	NA	NA	NA	NA	NA
WP_004568140.1|3148987_3149509_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_010930057.1|3149537_3150890_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_029444137.1|3151113_3154002_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930056.1|3156146_3157448_+	phospholipase	NA	NA	NA	NA	NA
WP_010930055.1|3157462_3158179_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930054.1|3158460_3159141_+	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930052.1|3159668_3160328_-	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930051.1|3160726_3162559_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_005012067.1|3162555_3163506_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814007.1|3164669_3166385_+	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_003814006.1|3166395_3166887_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_010930015.1|3166959_3167976_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814004.1|3168143_3168923_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003814003.1|3168941_3169469_-	lipoprotein	NA	NA	NA	NA	NA
WP_005019401.1|3169467_3169674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814002.1|3169762_3170032_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_003821234.1|3170122_3172282_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814000.1|3172402_3173122_+	lipoprotein	NA	NA	NA	NA	NA
WP_005013747.1|3173118_3174069_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813999.1|3174209_3175427_+	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_010930016.1|3175420_3176032_-	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813997.1|3176665_3177643_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_003813996.1|3177786_3178533_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_010930017.1|3178554_3179001_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_010930018.1|3179788_3182020_+	BCCT family transporter	NA	NA	NA	NA	NA
WP_003813993.1|3182042_3182843_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813992.1|3183124_3184357_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813991.1|3184467_3185457_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|3185487_3186876_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813988.1|3188474_3189458_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023994644.1|3189654_3190671_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	3255128	3324131	4107500	transposase	Klosneuvirus(16.67%)	55	NA	NA
WP_041337087.1|3255128_3256079_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3256075_3257095_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3257104_3259813_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3259960_3260617_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|3260715_3261666_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023998705.1|3261813_3262707_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3262906_3264601_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3264635_3265562_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3265630_3266728_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3266746_3267610_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3267621_3268404_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3268400_3269519_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3269515_3271048_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3271088_3272096_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3272240_3272963_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3272978_3274001_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3274317_3275052_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3275136_3276882_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3276878_3277631_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3277675_3278632_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3278720_3279287_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3279294_3280155_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_020699739.1|3280184_3280913_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
WP_003807497.1|3280944_3281628_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3282465_3283380_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3283444_3284353_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3284443_3285868_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3285869_3287192_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3287188_3289327_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3289404_3294525_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3294625_3294934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3295003_3295561_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3295576_3297058_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023853308.1|3297112_3298966_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929992.1|3299228_3300566_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3300600_3302598_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3302615_3304664_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3304794_3305661_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3305929_3306895_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3307009_3308158_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_003807462.1|3308582_3308894_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3308927_3309188_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3309337_3310471_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3310541_3311678_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3311843_3312638_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3312700_3313144_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3313259_3314210_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699729.1|3314332_3314740_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929984.1|3314812_3317008_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3317229_3318180_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3318139_3318664_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3318795_3319767_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3319886_3322331_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3322346_3322937_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3323180_3324131_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	3339576	3439688	4107500	protease,tRNA,tail,terminase,transposase	uncultured_Caudovirales_phage(14.29%)	107	NA	NA
WP_005012067.1|3339576_3340527_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3341258_3341636_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3341620_3342322_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3342465_3343158_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3343157_3344261_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3344370_3346743_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3346739_3348299_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3348323_3349121_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3349152_3350298_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3350402_3351845_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_010929184.1|3351847_3353077_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3355214_3356165_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247922.1|3357294_3357852_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3357827_3358178_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3358346_3359141_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3359137_3360187_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3360186_3360876_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3360962_3361460_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3361491_3362808_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3362824_3363799_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3363835_3364294_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3364293_3364974_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3364976_3365405_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3365457_3367188_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3367253_3367826_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3367806_3368493_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3368848_3369520_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010931422.1|3369848_3370070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926433.1|3370069_3370351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931423.1|3370347_3370863_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3370862_3371414_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3371392_3371635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3371639_3372452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3372451_3372715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3372755_3372953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3372933_3373350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3373354_3377311_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3377303_3377693_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3377689_3378223_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3378290_3378650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3378659_3381272_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3381297_3381588_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3381605_3381935_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3381944_3382463_-	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3382717_3383218_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3383225_3383648_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3383644_3384043_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3384039_3384435_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_162096760.1|3384434_3384623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3384636_3385119_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3385181_3385433_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3386107_3387058_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3387486_3388089_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3388211_3388454_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3388459_3389515_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3389543_3390962_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3390964_3392242_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_019247942.1|3392228_3392714_-|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_005012067.1|3393353_3394304_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633094.1|3394560_3395250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853179.1|3395242_3395494_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_010931451.1|3396048_3396660_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_019247378.1|3396731_3396938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3397189_3398140_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3398238_3399312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3399479_3400274_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3400313_3400838_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3400830_3402573_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3402782_3403541_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3403543_3404251_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3404267_3405149_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3405159_3405918_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3405886_3406642_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3406711_3408130_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3408151_3408802_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3408935_3409271_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_010930800.1|3409359_3410310_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3410386_3412207_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3412211_3413285_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3413407_3414376_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3414449_3415361_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3415379_3415952_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3416032_3416581_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3416580_3418170_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3418239_3418479_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_023995141.1|3418519_3419545_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3419610_3420792_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3420888_3421341_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3421350_3422691_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931461.1|3423007_3424045_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3424426_3424786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3424869_3425811_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3425885_3426836_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3427129_3428224_+	porin	NA	NA	NA	NA	NA
WP_033446149.1|3428314_3429187_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3429208_3430048_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3430123_3431641_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3431737_3432838_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3432854_3433277_-	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_003814195.1|3433299_3433512_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3433558_3434479_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_010931455.1|3434661_3435411_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3435413_3435743_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_033446148.1|3436030_3437383_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814185.1|3437394_3437778_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3437839_3438640_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_005015810.1|3438737_3439688_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	3600357	3655331	4107500	transposase	Lake_Baikal_phage(20.0%)	44	NA	NA
WP_005012067.1|3600357_3601308_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929827.1|3601424_3602492_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_019247670.1|3602567_3605696_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_023853155.1|3606203_3607169_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_010929830.1|3607171_3607843_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010929831.1|3607999_3608959_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_003821340.1|3608966_3609629_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_005013747.1|3609625_3610576_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929806.1|3610697_3611951_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929805.1|3611928_3612891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929804.1|3613022_3613517_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929803.1|3613516_3614749_+	dehydratase	NA	NA	NA	NA	NA
WP_019247316.1|3615494_3615776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929802.1|3615762_3616749_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929801.1|3616892_3617297_+	RidA family protein	NA	NA	NA	NA	NA
WP_010929800.1|3617438_3620825_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929799.1|3620855_3622319_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_019247315.1|3622327_3623956_+	L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010929797.1|3624041_3624701_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929796.1|3624730_3625171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929795.1|3625681_3625885_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.2	5.8e-14
WP_010929794.1|3626060_3626966_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929577.1|3627064_3628015_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3628113_3629064_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814674.1|3630845_3632039_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_010929793.1|3632104_3633133_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_019247419.1|3633159_3634332_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814681.1|3634457_3635435_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814685.1|3635445_3636417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929791.1|3636483_3637269_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814691.1|3637261_3638494_-	CoA transferase	NA	NA	NA	NA	NA
WP_003814694.1|3638689_3639445_-	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_010929789.1|3639555_3640074_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_010929788.1|3641862_3643263_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_003820700.1|3643362_3643707_+	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_003814701.1|3643795_3644266_+	universal stress protein	NA	NA	NA	NA	NA
WP_019247421.1|3644676_3645075_+	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_010929577.1|3645206_3646157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|3648601_3649336_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|3649745_3649925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|3650115_3651429_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|3651444_3652956_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|3652952_3654158_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|3654353_3655331_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	3663142	3722610	4107500	tRNA,transposase	Streptococcus_phage(50.0%)	56	NA	NA
WP_010929577.1|3663142_3664093_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486055.1|3664168_3665149_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|3665609_3666209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807867.1|3666277_3667270_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486054.1|3667319_3668909_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_014486053.1|3668949_3669846_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486052.1|3669842_3671549_+	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_019247259.1|3671716_3672895_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486051.1|3672891_3673662_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_014486050.1|3673710_3674412_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_077069104.1|3674338_3675322_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3675420_3676371_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486048.1|3676469_3677423_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_019248476.1|3677727_3678537_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486047.1|3680267_3680912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486046.1|3680908_3682129_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|3682151_3683147_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815840.1|3683219_3684425_-	CoA transferase	NA	NA	NA	NA	NA
WP_003815842.1|3684421_3684670_-	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_010927231.1|3684666_3685584_-	reductase	NA	NA	NA	NA	NA
WP_005012067.1|3685720_3686671_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929781.1|3686667_3687240_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	42.5	3.2e-25
WP_010929780.1|3687236_3688175_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	NA	NA	NA	NA
WP_100208326.1|3688299_3688776_+	YraN family protein	NA	NA	NA	NA	NA
WP_033446211.1|3688784_3689378_+	phosphoheptose isomerase	NA	A0A067XQR2	Caulobacter_phage	34.8	5.6e-17
WP_003815190.1|3689374_3690118_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003815191.1|3690114_3690606_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_010929779.1|3690746_3691535_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929778.1|3691796_3692699_+	acetylglutamate kinase	NA	NA	NA	NA	NA
WP_010929777.1|3692698_3693445_+	pyrimidine 5'-nucleotidase	NA	NA	NA	NA	NA
WP_010927138.1|3693494_3694070_+	nucleoid occlusion factor SlmA	NA	NA	NA	NA	NA
WP_010929776.1|3694282_3695776_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
WP_010929775.1|3695786_3696842_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_003815198.1|3696867_3698004_-	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_003815201.1|3698000_3699953_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_003815202.1|3699966_3700530_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_010929773.1|3700516_3701401_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_003815204.1|3701489_3702533_-	rod shape-determining protein	NA	NA	NA	NA	NA
WP_010929772.1|3702763_3703072_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_010929771.1|3703074_3704613_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_010929770.1|3704615_3706070_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_010929769.1|3706183_3706858_-	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010929768.1|3706995_3707784_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	25.7	1.2e-19
WP_010929767.1|3708206_3709550_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_023994714.1|3709586_3710225_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
WP_010929765.1|3711273_3712224_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997839.1|3712183_3713194_-	beta-propeller fold lactonase family protein	NA	NA	NA	NA	NA
WP_010929763.1|3713400_3714141_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003817846.1|3714355_3715366_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929762.1|3715384_3715864_-	heme-binding protein	NA	NA	NA	NA	NA
WP_010929761.1|3715888_3717349_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003815418.1|3717393_3718125_-	iron-containing redox enzyme family protein	NA	NA	NA	NA	NA
WP_010929760.1|3718244_3719753_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815420.1|3719983_3720727_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010929759.1|3720825_3721548_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929969.1|3721659_3722610_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP017120	Bordetella pertussis strain J209 chromosome, complete genome	4107500	3746193	3861861	4107500	protease,tRNA,transposase	Bacillus_phage(12.5%)	100	NA	NA
WP_005013747.1|3746193_3747144_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814960.1|3747266_3747995_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_010929739.1|3748091_3749270_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|3749266_3750100_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|3750136_3750877_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|3750996_3752172_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|3752168_3753122_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|3753135_3753537_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_010927118.1|3753529_3754135_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|3754222_3754387_-	rubredoxin	NA	NA	NA	NA	NA
WP_003814984.1|3755347_3756001_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|3756017_3757301_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|3757540_3759166_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|3759259_3759661_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|3759685_3760120_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|3760121_3761771_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|3761811_3762981_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929730.1|3762983_3763847_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|3767210_3767915_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|3767908_3768703_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|3768699_3769665_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|3769668_3770589_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|3770685_3771849_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|3772071_3772962_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|3772965_3773469_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|3773511_3774510_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|3774506_3775457_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|3775545_3775833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3776024_3776975_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|3777034_3777595_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|3779097_3779979_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|3780092_3781295_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|3781423_3783283_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|3783360_3784170_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|3784240_3785242_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|3785273_3786134_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|3786333_3787338_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|3787334_3788921_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|3788929_3789856_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|3789878_3790505_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|3790603_3791554_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|3791550_3792687_-|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|3792740_3793517_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|3793541_3794000_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|3794139_3794781_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|3794845_3796228_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_010929720.1|3796253_3797102_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|3797260_3797872_+	stringent starvation protein A	NA	NA	NA	NA	NA
WP_003815821.1|3797881_3798331_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_162096757.1|3798419_3798677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|3798997_3799159_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_077069015.1|3799234_3799450_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3799436_3800387_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929717.1|3801430_3801709_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_010929716.1|3802851_3803400_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929715.1|3803462_3805142_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929714.1|3805138_3806890_-	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_003817696.1|3806886_3807012_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_004567834.1|3807025_3808180_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_023852659.1|3808195_3809773_-	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010929712.1|3809898_3810444_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|3811003_3811954_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929711.1|3812684_3813665_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929710.1|3813678_3814803_+	CoA transferase	NA	NA	NA	NA	NA
WP_003814321.1|3814810_3816565_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929709.1|3816671_3817571_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814324.1|3817635_3818619_-	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929708.1|3818754_3819735_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929707.1|3819751_3821143_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929706.1|3821294_3821831_+|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_019247543.1|3821761_3823147_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_003814332.1|3823289_3823928_-	membrane protein	NA	NA	NA	NA	NA
WP_010929705.1|3824014_3825904_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814337.1|3825900_3826842_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003814339.1|3826947_3827997_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_010929704.1|3828249_3828951_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_010929703.1|3828947_3829646_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929702.1|3829646_3831002_+	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929701.1|3830998_3831490_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003814351.1|3831508_3832465_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814355.1|3833875_3835978_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814356.1|3836148_3837192_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814358.1|3837235_3837979_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814363.1|3839000_3839411_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_010929700.1|3840360_3841158_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930742.1|3841256_3842207_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|3842203_3843154_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3843240_3844191_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929681.1|3844305_3845307_-	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010929682.1|3845397_3845964_-	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929683.1|3846282_3848196_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929684.1|3848237_3849668_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_019247308.1|3849780_3851193_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818947.1|3851209_3851905_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3852122_3853073_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929687.1|3853097_3853997_-	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_010929688.1|3854151_3854700_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929689.1|3854738_3855458_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_023994893.1|3855628_3858472_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_033455792.1|3859065_3861861_+|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
