The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	51675	126303	1865056	transposase,protease,tRNA	Streptococcus_phage(25.0%)	54	NA	NA
WP_011226739.1|51675_53367_-|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.7	8.1e-77
WP_002949046.1|53524_53950_+	arginine repressor	NA	NA	NA	NA	NA
WP_011225277.1|53949_54309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095559197.1|54301_56860_+	DNA mismatch repair protein MutS	NA	A0A2P0VN50	Tetraselmis_virus	25.0	4.7e-36
WP_011680598.1|56893_57349_-	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_011680599.1|57362_57737_-	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095559198.1|57960_58266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680601.1|58317_60261_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.5	1.1e-61
WP_095559199.1|60390_60612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680603.1|60763_61354_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_095559200.1|61360_61915_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_011680605.1|62010_63282_+	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_011680606.1|63317_64457_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.5	2.2e-118
WP_002949058.1|64633_65032_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_011680607.1|71437_75832_+	DNA polymerase III subunit alpha	NA	A0A0A7RWA3	Clostridium_phage	36.5	4.0e-19
WP_011680608.1|75995_77237_+	aminopeptidase	NA	NA	NA	NA	NA
WP_002886331.1|77256_77487_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_011226749.1|77689_78019_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014607843.1|78136_78688_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011680612.1|81595_82363_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_002949105.1|82473_83514_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_011680613.1|83623_84094_-	small multi-drug export protein	NA	NA	NA	NA	NA
WP_095559201.1|84337_84793_+	CtsR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095559202.1|84793_87244_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	40.1	2.5e-127
WP_095559203.1|88827_90397_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_095559204.1|90460_91714_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	24.8	7.2e-14
WP_011680617.1|91916_94142_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_095559205.1|94150_94921_+	SseB family protein	NA	NA	NA	NA	NA
WP_002948444.1|94993_95614_+	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_014621037.1|95995_97339_+|tRNA	cysteine--tRNA ligase	tRNA	F1C979	Terra1_virus	37.2	1.5e-49
WP_002948449.1|97331_97733_+	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_157738608.1|98225_98402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095559206.1|98505_98748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011225307.1|98795_99539_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_002948464.1|99541_100057_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095559207.1|100065_100926_+	DegV family protein	NA	NA	NA	NA	NA
WP_095559208.1|101865_102822_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_002886374.1|103030_103477_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_095559209.1|103504_103897_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_141326873.1|104325_104634_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SAF1	Streptococcus_phage	63.4	1.2e-31
WP_011225312.1|104881_104986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680626.1|105028_106744_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_011680632.1|112122_112803_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.2	1.0e-107
WP_011680633.1|113519_113690_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095559210.1|113713_115369_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011680635.1|115471_116530_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004261408.1|116529_117483_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011680636.1|117479_119177_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.9	2.2e-18
WP_041827624.1|119271_119505_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011680637.1|119669_120620_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011680638.1|120616_121297_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.2	1.4e-109
WP_011680639.1|121454_122648_-	glycosyltransferase	NA	M1HTE2	Paramecium_bursaria_Chlorella_virus	30.5	2.9e-44
WP_041827626.1|122715_123879_-	nucleotide sugar dehydrogenase	NA	M1HV26	Paramecium_bursaria_Chlorella_virus	50.7	3.0e-99
WP_095559211.1|125614_126303_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	96.0	1.4e-123
>prophage 2
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	618271	628228	1865056		Streptococcus_phage(85.71%)	8	NA	NA
WP_004197422.1|618271_619273_+	catabolite control protein A	NA	C6ZCU4	Enterobacteria_phage	27.3	3.7e-21
WP_014608125.1|619331_619529_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011680937.1|620411_621527_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	99.6	5.2e-157
WP_095559290.1|621573_622029_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	96.7	5.3e-76
WP_011225708.1|622236_623541_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	99.5	3.2e-246
WP_095559291.1|624042_626229_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	99.1	0.0e+00
WP_002950251.1|626390_627554_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	99.5	5.9e-220
WP_002947238.1|627550_628228_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	100.0	1.9e-122
>prophage 3
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	734107	743033	1865056		Bacillus_phage(50.0%)	8	NA	NA
WP_002948474.1|734107_734713_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	33.7	8.0e-19
WP_011227085.1|734807_736058_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	52.1	2.0e-96
WP_014608183.1|736064_737042_+	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_014621429.1|737043_737655_+	lysozyme family protein	NA	A0A223LKM8	Bacillus_phage	41.0	4.6e-22
WP_011681019.1|737687_739427_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.2	2.6e-46
WP_011681020.1|739416_741165_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.9	7.1e-52
WP_002885174.1|741342_741474_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA	NA
WP_011681022.1|741482_743033_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	29.3	2.0e-42
>prophage 4
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	750208	825518	1865056	integrase,tRNA,bacteriocin,transposase	Streptococcus_phage(39.39%)	61	752058:752075	763447:763464
WP_095559325.1|750208_751927_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	36.6	5.4e-28
752058:752075	attL	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
WP_011681029.1|753972_754503_-	hypothetical protein	NA	Q77S00	Lactococcus_phage	89.8	2.9e-57
WP_011681030.1|754566_755154_-	hypothetical protein	NA	Q9AZW4	Lactococcus_phage	96.9	6.0e-104
WP_011681031.1|755536_755986_-	hypothetical protein	NA	F8HGP5	Streptococcus_phage	67.2	6.6e-18
WP_011681032.1|756204_756480_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	45.2	4.6e-14
WP_011681033.1|756496_756682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681035.1|756977_758483_-	DNA primase	NA	Q9AZI5	Lactococcus_phage	36.8	3.2e-61
WP_011681036.1|758472_759333_-	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	61.1	1.3e-99
WP_011681037.1|759347_759620_-	MerR family transcriptional regulator	NA	A0A1X9I5U9	Streptococcus_phage	50.6	1.0e-18
WP_041827827.1|759607_759934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681039.1|759950_760187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041827685.1|760926_761124_-	helix-turn-helix transcriptional regulator	NA	A0A1X9I5U5	Streptococcus_phage	60.0	1.2e-13
WP_095559326.1|761252_762101_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011681044.1|762180_763347_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	69.3	1.1e-154
WP_095559327.1|763515_763797_+	hypothetical protein	NA	NA	NA	NA	NA
763447:763464	attR	GATTTTAGAGGGAAATAT	NA	NA	NA	NA
WP_095559203.1|763953_765524_-|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_002950451.1|765811_768061_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_095559328.1|768249_769125_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_011681046.1|769264_770983_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	83.2	2.2e-271
WP_011681047.1|771065_771638_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_014608202.1|771665_772211_-	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	35.6	4.4e-24
WP_002948206.1|772203_772887_-	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_011681048.1|773080_774751_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
WP_011225813.1|775601_775901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011225814.1|775978_776302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095559203.1|777123_778693_+|transposase	IS3-like element ISSth1b family transposase	transposase	A0A0C5AC89	Paenibacillus_phage	50.9	2.0e-53
WP_011681050.1|780454_781525_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011681051.1|781642_783181_+	ClC family H(+)/Cl(-) exchange transporter	NA	NA	NA	NA	NA
WP_011681052.1|784006_788863_+	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	27.7	4.3e-06
WP_095559505.1|790683_791988_+|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	71.0	2.2e-167
WP_095559329.1|792084_792321_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_002947590.1|792389_793310_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	36.6	3.8e-36
WP_095559330.1|793634_794225_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_002947585.1|794240_794423_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	57.6	7.4e-13
WP_082302298.1|794438_794675_+	hypothetical protein	NA	A0A0H3UZD4	Geobacillus_virus	75.7	4.2e-24
WP_095559331.1|794655_795456_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	44.6	1.0e-50
WP_002950498.1|796630_797701_+	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	38.1	6.7e-53
WP_002950502.1|797814_799353_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.4	1.5e-16
WP_002950506.1|799345_800413_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023909578.1|800414_801371_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_023909579.1|801474_802110_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	60.0	2.9e-72
WP_095559332.1|802205_804692_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	NA	A0A1X9I5C8	Streptococcus_phage	47.6	8.8e-213
WP_011681058.1|804836_805319_+	DUF5590 domain-containg protein	NA	NA	NA	NA	NA
WP_095559333.1|805323_806505_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_065973119.1|806541_807888_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	31.4	3.3e-57
WP_157738617.1|807914_808088_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002950526.1|809407_809788_+	RidA family protein	NA	NA	NA	NA	NA
WP_014727531.1|809962_810616_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.9	1.3e-62
WP_014727530.1|810615_811059_+	6-carboxytetrahydropterin synthase QueD	NA	J9PV91	Bacillus_phage	55.6	7.9e-40
WP_014621464.1|811051_811768_+	7-carboxy-7-deazaguanine synthase QueE	NA	E7DN68	Pneumococcus_phage	47.7	8.2e-63
WP_002946191.1|811887_812379_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	56.7	1.4e-45
WP_011227118.1|813594_814365_+	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_011225838.1|814345_815236_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	28.9	3.3e-05
WP_014621467.1|815232_816207_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	73.8	4.0e-137
WP_002945081.1|816203_817115_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	64.7	7.1e-104
WP_095559334.1|817132_817264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095559335.1|817282_817882_+	C69 family dipeptidase	NA	NA	NA	NA	NA
WP_084829214.1|819160_819643_-	TspO/MBR family protein	NA	NA	NA	NA	NA
WP_095559337.1|822045_822717_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	85.6	4.1e-109
WP_095559338.1|822946_823468_-	HXXEE domain-containing protein	NA	NA	NA	NA	NA
WP_095559339.1|825317_825518_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	875170	921127	1865056	bacteriocin,tRNA	Anguillid_herpesvirus(11.11%)	44	NA	NA
WP_011225892.1|875170_876514_+|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_095559344.1|877880_878309_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	40.7	1.3e-20
WP_002947908.1|878310_878604_+	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_002950637.1|879966_881799_+	elongation factor 4	NA	A0A2K9L2P9	Tupanvirus	41.0	2.2e-19
WP_084831081.1|882321_883179_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011225902.1|883238_884039_+	Fe-S oxidoreductase	NA	NA	NA	NA	NA
WP_011225904.1|884453_885551_+	radical SAM protein	NA	NA	NA	NA	NA
WP_011225905.1|885547_886291_+	arginase family protein	NA	A0A0N9R043	Chrysochromulina_ericina_virus	28.0	8.9e-12
WP_011681092.1|886297_887470_+	MFS transporter	NA	NA	NA	NA	NA
WP_095559345.1|887723_889400_+	acetolactate synthase AlsS	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	25.9	2.7e-32
WP_095559346.1|889415_890135_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_080998417.1|892545_893379_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014608266.1|893555_893768_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002944663.1|893806_894346_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095559347.1|894479_895376_+	cation transporter	NA	NA	NA	NA	NA
WP_011681096.1|896678_897716_+	alcohol dehydrogenase catalytic domain-containing protein	NA	E3SJ82	Synechococcus_phage	25.3	6.6e-13
WP_011225920.1|898129_898309_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023909620.1|898387_898837_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014621540.1|899047_899302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011681098.1|900097_900862_+	nucleoside phosphorylase	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	69.4	3.4e-59
WP_095559348.1|900923_901559_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_014621542.1|902527_902794_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681101.1|904485_906144_-	fibronectin/fibrinogen-binding protein	NA	M1I0S4	Acanthocystis_turfacea_Chlorella_virus	40.8	1.6e-08
WP_011681102.1|906442_907423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011681103.1|907728_908214_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_011681104.1|908217_908409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011681105.1|908845_909064_+	hypothetical protein	NA	A3F673	Streptococcus_phage	55.2	4.4e-12
WP_011681106.1|909265_909934_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157738619.1|909949_910159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011225930.1|910200_910749_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_011681107.1|910805_911021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002952956.1|910989_911793_+	dihydroorotate dehydrogenase electron transfer subunit	NA	NA	NA	NA	NA
WP_095559349.1|911811_912759_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_095559350.1|912897_913902_+	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_014608281.1|913901_914231_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_095559351.1|914584_915007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095559352.1|915041_916436_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_095559353.1|916447_918595_-	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.6	1.0e-44
WP_101415610.1|918869_919091_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_058621356.1|919142_919370_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_095559354.1|919391_919775_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015695689.1|919986_920289_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_095559355.1|920446_920680_+|bacteriocin	bacteriocin BlpK	bacteriocin	NA	NA	NA	NA
WP_095559356.1|920869_921127_+|bacteriocin	garvicin Q family class II bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 6
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	1280910	1342665	1865056	transposase,tRNA	Bacillus_phage(12.5%)	44	NA	NA
WP_095559508.1|1280910_1282250_-|transposase	IS3-like element ISSth6 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.5	3.3e-65
WP_024703933.1|1282796_1283429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095559408.1|1283708_1286888_-	SMC family ATPase	NA	A0A0E3FCH5	Synechococcus_phage	23.9	1.1e-05
WP_095559409.1|1286884_1288093_-	exonuclease SbcCD subunit D	NA	D9J0R3	Brochothrix_phage	21.5	1.2e-05
WP_095559410.1|1288945_1292026_-	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	32.4	3.7e-144
WP_095559411.1|1292029_1293934_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_095559412.1|1294036_1295083_-	galactose-1-epimerase	NA	NA	NA	NA	NA
WP_011227394.1|1295151_1296153_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.3	1.2e-48
WP_041827071.1|1296182_1297664_-	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_095559413.1|1297683_1298850_-	galactokinase	NA	NA	NA	NA	NA
WP_011226273.1|1298993_1299989_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_087010049.1|1300468_1300558_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_014608522.1|1300570_1300762_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	50.0	1.3e-07
WP_004197624.1|1300783_1300972_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_002951370.1|1303114_1303396_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	31.7	7.2e-07
WP_014608527.1|1304992_1307257_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA	NA
WP_011681401.1|1308568_1310983_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	50.9	4.7e-86
WP_011226284.1|1311135_1312134_-	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	48.4	5.4e-28
WP_011226285.1|1312135_1312855_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_011226286.1|1312844_1313363_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002951384.1|1314034_1314679_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011226288.1|1314668_1315679_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_011226289.1|1315675_1316374_-	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_014621795.1|1317432_1319304_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	B5LWE2	Feldmannia_species_virus	29.9	1.4e-21
WP_002946881.1|1319303_1320041_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_014608533.1|1320084_1321407_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_014608534.1|1321396_1322332_-|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
WP_014608535.1|1322349_1324746_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_014608536.1|1324887_1325199_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_014608537.1|1325223_1325853_-	guanylate kinase	NA	S4VT50	Pandoravirus	44.2	1.9e-10
WP_014608538.1|1326078_1327470_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_014608539.1|1327483_1328299_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_011681412.1|1328291_1329086_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011681413.1|1329269_1329647_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011226301.1|1329651_1330350_+	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	26.2	8.1e-07
WP_002951425.1|1330361_1331147_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002951426.1|1331196_1332126_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	8.5e-20
WP_011226304.1|1332118_1333204_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.4	5.1e-16
WP_002946409.1|1333213_1334140_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681416.1|1334139_1335633_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011681417.1|1335694_1337662_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_101415656.1|1338017_1339196_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	52.6	6.2e-108
WP_095559414.1|1339240_1341214_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095559415.1|1341518_1342665_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.0	2.3e-46
>prophage 7
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	1476077	1485024	1865056	transposase	Acinetobacter_phage(50.0%)	8	NA	NA
WP_011681518.1|1476077_1476845_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	36.2	6.3e-29
WP_095559430.1|1476841_1477846_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.3	1.2e-48
WP_095559431.1|1477936_1478503_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	45.1	2.9e-39
WP_011681521.1|1478499_1479855_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	29.9	8.0e-35
WP_041827087.1|1479931_1480213_-	chorismate mutase	NA	NA	NA	NA	NA
WP_014621725.1|1480758_1482063_+|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	71.0	1.3e-167
WP_023909885.1|1482231_1482582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681524.1|1482663_1485024_-	HAD-IC family P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	24.4	1.3e-35
>prophage 8
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	1696019	1755952	1865056	transposase,tRNA,protease,bacteriocin	Streptococcus_phage(30.0%)	58	NA	NA
WP_011226604.1|1696019_1696694_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_011226605.1|1696684_1697212_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_011681671.1|1697280_1698414_-	N-acetyldiaminopimelate deacetylase	NA	NA	NA	NA	NA
WP_002951996.1|1698492_1699191_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA	NA	NA	NA	NA
WP_011681672.1|1700146_1700980_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_011681673.1|1701348_1701516_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
WP_011681674.1|1701568_1701832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011681675.1|1701912_1702431_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_011227579.1|1703191_1703584_-	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	48.5	1.5e-26
WP_003095911.1|1703788_1704016_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_023909965.1|1704030_1705062_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_023909966.1|1705198_1705822_-|tRNA	DUF4479 and tRNA-binding domain-containing protein	tRNA	NA	NA	NA	NA
WP_002945230.1|1705831_1706146_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_084825659.1|1706142_1706427_-	DUF4651 domain-containing protein	NA	NA	NA	NA	NA
WP_023909969.1|1706526_1707594_+	glutamyl aminopeptidase	NA	NA	NA	NA	NA
WP_011226616.1|1707609_1708380_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	36.1	2.8e-32
WP_023909970.1|1708409_1709072_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011681680.1|1709168_1709612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014608739.1|1709685_1710111_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011681681.1|1710067_1710343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011681682.1|1710354_1710552_-	helix-turn-helix transcriptional regulator	NA	A0A1L2BY74	Clostridium_phage	36.9	8.1e-05
WP_095559463.1|1712049_1713006_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_095559464.1|1713050_1713368_-	competence protein ComG	NA	NA	NA	NA	NA
WP_082309153.1|1713345_1713783_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_082309154.1|1713766_1714060_-	competence protein ComGE	NA	NA	NA	NA	NA
WP_082309155.1|1714031_1714394_-	competence protein	NA	NA	NA	NA	NA
WP_002946126.1|1714419_1714746_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_120764773.1|1714742_1715843_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_084829888.1|1715724_1716666_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA	NA
WP_011226630.1|1716746_1717109_-	DUF1033 family protein	NA	NA	NA	NA	NA
WP_011681690.1|1717267_1720906_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	25.6	5.6e-67
WP_095559465.1|1721006_1724588_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	23.9	6.8e-49
WP_023909985.1|1724950_1727374_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_065972619.1|1727475_1728732_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	41.8	1.9e-75
WP_002952054.1|1728857_1729880_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_011226635.1|1729955_1730432_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_011681694.1|1730424_1732125_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	33.3	3.4e-67
WP_014622014.1|1734148_1735783_-	DAK2 domain-containing protein	NA	NA	NA	NA	NA
WP_011681698.1|1735815_1736181_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_011681699.1|1736290_1737580_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_014608753.1|1737637_1739122_-	threonine synthase	NA	NA	NA	NA	NA
WP_014622016.1|1739792_1740131_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002952083.1|1740123_1740357_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_037623252.1|1740340_1740775_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_095559466.1|1740787_1741615_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_014608758.1|1741924_1742320_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_095559467.1|1742458_1744354_-	endopeptidase	NA	A0A1V0SHG2	Klosneuvirus	28.9	1.5e-71
WP_002952104.1|1746735_1746894_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095559468.1|1746897_1747446_+	UTRA domain-containing protein	NA	NA	NA	NA	NA
WP_014622026.1|1747501_1748062_-	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_084830851.1|1748074_1748413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011227599.1|1748445_1748802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002953561.1|1749065_1749191_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_095559469.1|1749306_1750056_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	38.2	1.9e-38
WP_080998454.1|1750566_1751721_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_095559470.1|1752239_1753457_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_095559471.1|1753476_1754406_+	alpha-L-glutamate ligase	NA	NA	NA	NA	NA
WP_095559500.1|1754647_1755952_-|transposase	ISL3-like element ISSth1 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	71.0	1.7e-167
>prophage 9
NZ_CP017064	Streptococcus thermophilus strain ST3, complete genome	1865056	1845208	1858266	1865056	tRNA	Streptococcus_phage(37.5%)	12	NA	NA
WP_002947774.1|1845208_1846051_-	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.2	2.1e-17
WP_002947776.1|1846026_1846857_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	31.3	4.5e-20
WP_095559494.1|1846869_1847412_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_014608803.1|1847424_1848282_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011226704.1|1848340_1849618_-	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	28.3	4.3e-22
WP_002952285.1|1849619_1850870_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	39.9	8.6e-92
WP_002947785.1|1850947_1851325_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	68.4	1.7e-22
WP_002947786.1|1851327_1852428_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_011227627.1|1852596_1854078_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	6.8e-96
WP_095559495.1|1854254_1855277_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_064355694.1|1855704_1856577_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	33.6	1.1e-32
WP_095559496.1|1856643_1858266_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.5	1.4e-46
