The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	0	71085	4110590	tRNA,transposase	Natrialba_phage(12.5%)	60	NA	NA
WP_010929569.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|4214_5132_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_003806883.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|20126_20531_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|20771_21947_+	membrane protein	NA	NA	NA	NA	NA
WP_010929576.1|24352_25459_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|26470_27286_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929579.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929581.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995008.1|32163_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814400.1|36949_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815267.1|45113_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|49196_50444_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|50440_51055_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|51190_52141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|52183_53440_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|54671_55406_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|55411_56002_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|56026_56716_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|56712_57474_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|57553_58453_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|58546_59497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|60297_61524_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|61523_61943_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|62126_63068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929598.1|63491_64328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929599.1|64522_65104_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_019248465.1|65116_65434_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|65537_66596_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|66630_67902_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|68531_69713_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|70134_71085_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	78683	137157	4110590	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_005012067.1|78683_79634_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|79708_80653_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|80649_82524_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|83871_84576_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|84572_85679_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|85940_86534_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|86530_87718_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|87780_89040_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|89063_90152_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|90159_91260_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|91263_91839_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|91842_92895_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|93025_94033_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|94034_95321_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|95337_95493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|95517_96321_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|96317_97184_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_076879533.1|97252_98389_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|98388_99228_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|100160_100763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|100792_101446_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|101578_102835_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_019248163.1|102837_103782_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|103857_104133_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|104140_104803_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|104864_105866_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|105880_106429_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|106486_107383_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|107379_108441_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|108476_109427_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|110326_111520_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|111601_112231_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|112292_112976_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|112985_114668_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|114955_115303_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|115393_115711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|115993_117010_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|117085_117886_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|117882_118758_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|118768_120061_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|120103_121144_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|121249_122071_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|122171_123122_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|123220_124126_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|124122_124956_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|125792_126803_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|126799_127189_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|128082_129336_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|129426_131127_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|131553_132201_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|132199_133639_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|133731_134034_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|134061_134940_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|136206_137157_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	165942	220559	4110590	tRNA,transposase,protease	Diachasmimorpha_longicaudata_entomopoxvirus(14.29%)	48	NA	NA
WP_005015810.1|165942_166893_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|168336_169239_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|169216_169846_-	LemA family protein	NA	NA	NA	NA	NA
WP_029443820.1|170176_171559_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_010929661.1|171592_172222_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|172270_173878_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|173902_174586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|174667_175144_-	bacterioferritin	NA	NA	NA	NA	NA
WP_077068973.1|175184_175364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|175350_176301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|177416_177944_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|178035_178851_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|178911_179646_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|179683_181762_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|182011_182284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486043.1|182382_183471_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|183474_185379_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|185375_189050_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|189110_189674_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|189681_190104_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|190131_190551_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|190579_191026_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|191152_191650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|191804_194075_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|194123_195356_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|195454_196405_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|196503_197454_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879535.1|197499_198192_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
WP_019248671.1|198188_199082_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|199476_200577_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|200658_201033_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|201092_203957_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|204101_204842_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|204911_206123_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|206151_207120_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|207733_208684_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|208840_209164_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010929698.1|209268_210318_-	cyclase	NA	NA	NA	NA	NA
WP_003819081.1|210314_211139_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|211139_211436_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|211461_211737_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|211793_212438_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|212437_213124_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|213253_214105_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|214155_214881_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|214912_216262_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|216373_217306_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|217763_220559_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
>prophage 4
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	226551	288075	4110590	tRNA,transposase,protease	Bacillus_phage(25.0%)	56	NA	NA
WP_005012808.1|226551_227502_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_127013037.1|227488_227689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003818947.1|227720_228416_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|228432_229845_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|229957_231388_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|231429_233343_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|233661_234228_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|234318_235320_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_005012067.1|235434_236385_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|236471_237422_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|237418_238369_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302767.1|238355_238529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929700.1|238467_239265_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|240214_240625_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|241646_242390_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|242433_243477_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|243647_245750_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|247160_248117_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|248135_248627_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|248623_249979_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|249979_250678_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|250674_251376_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|251628_252678_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|252783_253725_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|253721_255611_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|255697_256336_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|256478_257864_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|257794_258331_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|258482_259874_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|259890_260871_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|261006_261990_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|262054_262954_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|263060_264815_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|264822_265947_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|265960_266941_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|267671_268622_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|269181_269727_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|269810_271430_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|271445_272600_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|272613_272739_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|272735_274487_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|274483_276163_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_085964336.1|276198_276774_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
WP_010929717.1|277916_278195_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|279238_280189_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|280175_280391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|280466_280628_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|280635_280776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|281294_281744_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|281753_282365_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_019247426.1|282523_283378_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|283397_284780_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|284844_285486_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|285625_286084_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|286108_286885_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|286938_288075_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
>prophage 6
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	557407	616707	4110590	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_023852617.1|557407_558358_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815367.1|559681_560458_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931383.1|560492_562265_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931382.1|562266_563169_-	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_003817821.1|563293_563653_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931381.1|563684_564647_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_005012067.1|564745_565696_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931380.1|565708_566644_-	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010931379.1|566703_567543_-	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931378.1|567539_568709_-	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_003815379.1|568705_569995_-	murein transglycosylase A	NA	NA	NA	NA	NA
WP_003815381.1|570037_570412_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815384.1|570517_571255_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_010931377.1|571262_571967_+	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_010931376.1|572230_573751_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_003815390.1|573806_574370_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_003817833.1|574388_575420_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_010931375.1|575416_576205_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_014905441.1|576380_577370_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|579126_580077_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931374.1|581299_582202_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814312.1|582203_583058_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931373.1|583104_584214_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931372.1|584224_584743_-	flavin reductase family protein	NA	NA	NA	NA	NA
WP_003814302.1|584772_585405_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_003814300.1|585476_586136_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814298.1|586132_587353_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247745.1|587621_588494_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_010931370.1|588649_589387_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852728.1|589389_590985_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931368.1|591116_592106_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927020.1|592102_592813_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931363.1|592908_593925_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814287.1|594196_594823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931367.1|594878_596006_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814283.1|596011_601729_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_003814281.1|602012_602228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814277.1|602296_603241_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814275.1|603429_604365_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_010931365.1|604482_606054_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247692.1|606133_607342_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247693.1|607839_608757_+	DMT family transporter	NA	NA	NA	NA	NA
WP_003814254.1|611117_611339_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_010929632.1|611669_612686_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814252.1|612770_613022_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_003814250.1|613025_613841_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_010931362.1|613953_614832_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003820957.1|614943_616707_-|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
>prophage 7
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	622862	676603	4110590	transposase	Salmonella_phage(33.33%)	50	NA	NA
WP_010930179.1|622862_623813_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931358.1|623881_624880_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931357.1|624884_625565_-	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_003814742.1|625702_626095_+	OsmC family protein	NA	NA	NA	NA	NA
WP_010931561.1|626202_627219_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814739.1|627458_628244_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931356.1|628338_629748_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|629758_630559_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931355.1|630579_631350_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010931354.1|631392_631860_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_005013747.1|631856_632807_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818344.1|634755_635634_-	fatty acid desaturase	NA	NA	NA	NA	NA
WP_019247959.1|636560_639539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080501793.1|639492_639906_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|639892_640843_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931353.1|640839_641928_-	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931352.1|641963_642827_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931351.1|643966_644356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486103.1|644359_645142_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_033446332.1|645175_645928_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931349.1|646236_647376_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931348.1|647372_648164_+	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931347.1|648160_648910_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931346.1|648906_649779_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_004566224.1|649778_650780_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808195.1|650776_651940_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003808193.1|651965_652649_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247312.1|652602_653937_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931344.1|653929_655024_+	CoA transferase	NA	NA	NA	NA	NA
WP_153302791.1|655627_655804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|655790_656741_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931343.1|658681_659941_+	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_003814858.1|659937_661476_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_003814856.1|661472_662669_-	MFS transporter	NA	NA	NA	NA	NA
WP_029443830.1|662665_664057_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814852.1|664053_665070_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010927102.1|665138_666374_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931341.1|666474_667269_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|667638_668046_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929281.1|668463_668736_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_124740609.1|668905_669130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814832.1|669317_670172_+	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_010931340.1|670272_670575_+	urease subunit gamma	NA	NA	NA	NA	NA
WP_015040527.1|670601_671237_+	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931338.1|671253_671562_+	urease subunit beta	NA	NA	NA	NA	NA
WP_010931337.1|671558_673274_+	urease subunit alpha	NA	NA	NA	NA	NA
WP_014905506.1|673276_673894_+	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_019247677.1|673994_674579_+	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_010931336.1|674603_675248_+	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_023995489.1|675652_676603_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	725490	757299	4110590	tRNA,integrase,transposase,protease	Pseudomonas_phage(33.33%)	22	722789:722807	742677:742695
722789:722807	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
WP_029443720.1|725490_726138_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931307.1|726134_726917_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_010931306.1|726989_728081_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_010931305.1|728360_729488_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
WP_010931304.1|729829_730876_+	Fic family protein	NA	NA	NA	NA	NA
WP_010931303.1|731023_734143_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_010931302.1|734144_737096_+	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
WP_010931301.1|737111_738323_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_076879586.1|738319_738520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|738506_739457_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077274087.1|739473_739968_+	DUF4276 family protein	NA	NA	NA	NA	NA
WP_019247740.1|739971_740229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853401.1|740253_741684_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_029443992.1|741765_742050_+	ATP-dependent helicase	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
WP_005012067.1|742833_743784_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
742677:742695	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
WP_019247178.1|744202_746767_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_019247179.1|746811_748665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014905963.1|748997_750569_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929969.1|752010_752961_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905961.1|753046_753787_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_029443749.1|754013_754961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|756348_757299_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	1007251	1101288	4110590	transposase	Bacillus_virus(27.27%)	88	NA	NA
WP_005012067.1|1007251_1008202_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486100.1|1008304_1008967_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019249309.1|1009061_1009232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247599.1|1009584_1010586_+	amidase	NA	NA	NA	NA	NA
WP_003818702.1|1010588_1011785_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486098.1|1011805_1012609_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_019247598.1|1012689_1012986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247597.1|1013016_1013580_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014486097.1|1013620_1014478_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818698.1|1014485_1015235_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486096.1|1015256_1016129_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_014486095.1|1016157_1016937_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486094.1|1016970_1017768_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014486092.1|1019219_1020392_+	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
WP_003808978.1|1020422_1020815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486091.1|1020808_1021669_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003818691.1|1021672_1022635_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486089.1|1023411_1024101_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_010930208.1|1024961_1025912_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931181.1|1026261_1027131_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010926062.1|1027201_1027897_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931179.1|1027886_1028396_+	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010931178.1|1028392_1029613_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931177.1|1029560_1030463_-	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_023995373.1|1031349_1032636_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931176.1|1032674_1034048_+	amidase	NA	NA	NA	NA	NA
WP_010931175.1|1034086_1034788_-	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931174.1|1035086_1036076_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003809010.1|1036176_1036638_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931173.1|1036653_1037202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931172.1|1037343_1038819_-	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931171.1|1038924_1040016_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931170.1|1040019_1040802_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931169.1|1040811_1041600_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931168.1|1042725_1043160_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931167.1|1043156_1044167_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_003809025.1|1044210_1045137_-	VOC family protein	NA	NA	NA	NA	NA
WP_003809026.1|1045423_1045792_+	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_023853143.1|1046008_1046959_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931165.1|1047003_1049430_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_010931164.1|1049478_1050171_+	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931163.1|1050243_1051443_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003819549.1|1051460_1052366_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931162.1|1052481_1053411_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931161.1|1053436_1054783_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931160.1|1054810_1055560_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931159.1|1055573_1056356_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1056548_1057499_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879583.1|1057560_1058706_-	porin	NA	NA	NA	NA	NA
WP_003815281.1|1059182_1060019_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_023997028.1|1060088_1061054_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|1061050_1062001_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_124740747.1|1061987_1062194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247492.1|1062386_1062929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1063964_1064915_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247402.1|1065156_1065525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248356.1|1065570_1066695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003820818.1|1067829_1068570_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931155.1|1068673_1069294_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852714.1|1069397_1070348_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931154.1|1070344_1072453_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003820814.1|1072597_1073257_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_003820813.1|1073288_1073753_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_019248355.1|1074028_1074214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931153.1|1074265_1075018_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931152.1|1075024_1076287_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_023852748.1|1076328_1077567_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820806.1|1078644_1079772_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_003814524.1|1079782_1080610_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931150.1|1080596_1081463_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010931149.1|1082829_1083234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1083325_1084276_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446288.1|1084645_1085557_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003820799.1|1085571_1086282_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931147.1|1086278_1087523_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820797.1|1087524_1087959_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_003814535.1|1087987_1088293_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_076879633.1|1088186_1088405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1088391_1089342_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|1089398_1090547_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_010930176.1|1090627_1091578_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931144.1|1092109_1092907_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247918.1|1092954_1093608_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003814544.1|1093564_1094653_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_003814547.1|1094817_1097043_-	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_023852715.1|1099320_1100217_+	inositol monophosphatase	NA	NA	NA	NA	NA
WP_076879632.1|1100105_1100351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1100337_1101288_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	1131674	1202644	4110590	transposase,protease	uncultured_Mediterranean_phage(25.0%)	52	NA	NA
WP_005012808.1|1131674_1132625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|1132681_1133794_+	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012067.1|1136177_1137128_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931129.1|1137718_1138495_+	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_003812908.1|1138612_1138876_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931128.1|1138976_1139981_-	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_010931127.1|1140181_1141783_-	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931126.1|1141808_1142567_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931125.1|1142658_1143315_-	adenylate kinase	NA	NA	NA	NA	NA
WP_010931124.1|1143405_1144170_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003812895.1|1144179_1144368_-	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931123.1|1144423_1145467_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_010931122.1|1145463_1145877_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_003812889.1|1145873_1146494_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_005012067.1|1146774_1147725_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931120.1|1147892_1149284_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_010931119.1|1149356_1149935_+	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_019247560.1|1150051_1151449_+	chloride channel protein	NA	NA	NA	NA	NA
WP_010931117.1|1151564_1152770_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_003820399.1|1152869_1153388_-	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_003812875.1|1153482_1153728_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820400.1|1153955_1154270_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_010931116.1|1154359_1159549_+	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_010931115.1|1159545_1161714_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023995053.1|1161733_1164085_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_003820402.1|1164089_1165409_+	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_014905522.1|1165427_1167101_+	MCE family protein	NA	NA	NA	NA	NA
WP_010931111.1|1167105_1167774_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_010931110.1|1167930_1171752_+	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930800.1|1172082_1173033_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812857.1|1173054_1174200_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|1174348_1175278_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812851.1|1175274_1176363_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010931109.1|1176359_1177163_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812846.1|1177159_1177891_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931108.1|1177948_1179238_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931107.1|1179334_1179937_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812839.1|1184489_1184828_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931105.1|1185535_1185802_+	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_005012067.1|1187508_1188459_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931103.1|1188455_1189787_-	MFS transporter	NA	NA	NA	NA	NA
WP_019247695.1|1191026_1193048_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003819722.1|1193040_1193682_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_003809276.1|1193678_1194086_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_010931101.1|1194082_1194883_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_010931100.1|1194957_1195662_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931099.1|1195693_1196488_+	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931070.1|1196484_1197435_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1197533_1198484_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812014.1|1198582_1199017_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_010931098.1|1199099_1201436_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_010930525.1|1201627_1202644_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	1302864	1360075	4110590	transposase	Klosneuvirus(16.67%)	52	NA	NA
WP_010931070.1|1302864_1303815_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1307561_1308173_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1308395_1309856_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1309952_1311545_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_076879563.1|1311531_1311810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931039.1|1311868_1312156_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1312157_1313498_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1313593_1314283_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1314295_1315726_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1317450_1318272_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1318282_1319854_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1319882_1320860_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1320886_1321690_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1321686_1322481_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1322488_1323724_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_010931032.1|1323716_1324151_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_005013747.1|1324900_1325851_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1326472_1328200_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1328311_1329670_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_076879564.1|1329790_1329976_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1329962_1330913_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1330953_1332024_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1332046_1332925_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1333096_1334068_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1334230_1335073_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1335234_1335915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931024.1|1335908_1337078_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931023.1|1337074_1338106_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931022.1|1338149_1339391_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1339425_1340958_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1341038_1341662_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1341692_1342304_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1342339_1342810_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_019248147.1|1343241_1344246_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1344282_1345797_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1345800_1346760_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1346788_1347592_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1347593_1349228_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1349311_1350373_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1350571_1350841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1350844_1351369_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1351784_1352735_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994671.1|1352731_1353802_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1353874_1354513_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1354807_1355035_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1355157_1355871_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1356115_1357066_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302789.1|1357052_1357217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931009.1|1357169_1357451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1357565_1359014_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_153302788.1|1358997_1359138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1359124_1360075_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	1415569	1471975	4110590	transposase	Enterococcus_phage(16.67%)	51	NA	NA
WP_010930208.1|1415569_1416520_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930975.1|1416522_1417476_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930974.1|1417479_1418355_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	37.6	2.2e-33
WP_010929099.1|1418360_1419389_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010930973.1|1419385_1420429_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930972.1|1420496_1421522_-	dipeptidase	NA	NA	NA	NA	NA
WP_010930971.1|1421803_1423057_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
WP_003821030.1|1423067_1423340_+	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_010930970.1|1423336_1426276_+	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA	NA
WP_010930969.1|1426283_1426883_+	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
WP_010929093.1|1426883_1427732_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_019248827.1|1427769_1428756_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930967.1|1428771_1430208_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010930966.1|1430220_1431012_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_015065057.1|1431324_1432386_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_010930964.1|1432422_1433232_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_010930963.1|1433232_1433781_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_003814098.1|1433931_1434351_+	ferric iron uptake transcriptional regulator	NA	NA	NA	NA	NA
WP_010930962.1|1434425_1436087_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_010930961.1|1436102_1437002_-	NAD kinase	NA	NA	NA	NA	NA
WP_003814090.1|1437116_1438121_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_023853055.1|1438178_1439267_+	ferrochelatase	NA	NA	NA	NA	NA
WP_023853049.1|1439348_1439591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814083.1|1439732_1440287_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_010926991.1|1440294_1440675_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010930959.1|1440765_1442691_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.3	1.1e-146
WP_010929084.1|1442791_1443925_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	60.8	3.9e-19
WP_010930957.1|1444093_1446844_-	insulinase family protein	NA	A0A2K9LA15	Tupanvirus	28.1	1.5e-19
WP_003814072.1|1447176_1447551_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930956.1|1447588_1448131_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930955.1|1448134_1449307_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_003814066.1|1449328_1450216_-	MoxR family ATPase	NA	NA	NA	NA	NA
WP_005013747.1|1450308_1451259_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219858.1|1451245_1451413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814065.1|1451425_1451779_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1451791_1452154_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1452195_1452621_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1452823_1454080_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1454278_1455259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1455408_1456650_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1456748_1457699_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1457797_1458748_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929956.1|1458846_1459797_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1459805_1460501_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1463322_1463922_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1463932_1466098_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1466121_1467906_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1467905_1467995_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1468689_1468962_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1468961_1471028_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1471024_1471975_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	1548484	1608396	4110590	tRNA,transposase	Streptococcus_virus(12.5%)	55	NA	NA
WP_010930416.1|1548484_1548973_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1549090_1549669_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_003809561.1|1549741_1550143_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_153302776.1|1550081_1550255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1550241_1551192_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1551198_1552311_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1552997_1554200_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1554403_1557064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1557076_1560481_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1561148_1563374_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1563420_1563747_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1563797_1564406_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1564504_1565455_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1565524_1566289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1566285_1566885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820094.1|1566988_1567834_-	putative membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1567899_1568526_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1568522_1569473_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1569571_1570522_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068977.1|1570508_1570697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930428.1|1570620_1571742_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1571722_1572724_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1572829_1574341_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1574337_1575642_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1575753_1576314_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1576581_1577136_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1577591_1577807_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1578061_1580659_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1580655_1581843_+	cupin	NA	NA	NA	NA	NA
WP_019248658.1|1582501_1583116_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930437.1|1583204_1584332_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1584343_1585249_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_023994753.1|1585999_1586155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1586141_1587092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1587273_1588026_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1588094_1588754_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1588750_1589479_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1589491_1591771_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1591795_1591999_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_003811129.1|1592040_1592688_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
WP_010930443.1|1592808_1593726_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1593722_1594436_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1594673_1595444_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1595448_1596048_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1596292_1597783_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1597841_1598126_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010928840.1|1598122_1598251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930445.1|1598263_1598419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1598691_1599618_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1599754_1600495_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1600661_1602038_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1602219_1603125_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1604776_1606579_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1606696_1607347_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1607445_1608396_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	1653568	1709159	4110590	transposase	Brazilian_cedratvirus(25.0%)	49	NA	NA
WP_005013747.1|1653568_1654519_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1654577_1655351_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1655343_1656900_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_095597223.1|1656896_1657847_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219857.1|1657833_1657989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810741.1|1659173_1659776_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1660015_1660717_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1660710_1661493_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1661677_1662628_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302777.1|1662614_1662776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930483.1|1662726_1663464_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1663653_1664412_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1664458_1665448_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1665625_1666594_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1668133_1669102_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1669110_1670052_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1670525_1671536_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1671526_1673041_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1673037_1674384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1674386_1675421_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1675470_1677096_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1677648_1678599_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1678703_1679651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1679704_1681519_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1681511_1682186_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1682315_1685390_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1685403_1685703_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1686017_1686641_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1686884_1687754_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1687731_1688676_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930495.1|1688761_1689733_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930496.1|1689800_1690574_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1690570_1691767_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1691797_1692748_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1692969_1693659_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1693723_1694479_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1694530_1695523_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1695532_1696486_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1696601_1697564_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1698965_1699394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1699390_1700341_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1700634_1701357_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1701795_1702983_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1702986_1703367_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1705086_1706058_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1706071_1706785_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1706789_1707707_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1707813_1708110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929588.1|1708208_1709159_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	1941923	2011575	4110590	tRNA,transposase	Staphylococcus_phage(16.67%)	56	NA	NA
WP_003818515.1|1941923_1944581_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
WP_010930709.1|1944658_1945861_-	MFS transporter	NA	NA	NA	NA	NA
WP_003810260.1|1945857_1946370_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810262.1|1946492_1946831_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|1947206_1948157_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_062826579.1|1948255_1949206_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853105.1|1949369_1951265_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
WP_010930711.1|1951378_1951546_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003810297.1|1951609_1951846_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010930712.1|1952214_1953414_-	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_010929591.1|1954929_1955880_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818523.1|1956331_1957333_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810306.1|1957505_1958363_+	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
WP_003810308.1|1958359_1959622_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
WP_003818524.1|1959722_1960097_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_076879569.1|1960145_1961357_+	acetyl-CoA C-acyltransferase family protein	NA	NA	NA	NA	NA
WP_010930714.1|1961441_1962212_+	spermidine synthase	NA	NA	NA	NA	NA
WP_010930715.1|1962325_1963090_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023996008.1|1963205_1964342_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
WP_010930717.1|1964338_1965145_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818532.1|1966889_1967861_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818533.1|1968017_1968530_+	superoxide dismutase family protein	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
WP_010930718.1|1968688_1969663_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930719.1|1970663_1971458_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
WP_003818535.1|1971483_1972290_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810329.1|1972400_1972991_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_010930720.1|1973001_1974180_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_010930721.1|1974282_1974657_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_019248531.1|1974909_1976241_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_019247651.1|1976307_1979538_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_003810344.1|1981028_1981775_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_010930724.1|1981859_1982321_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_010930725.1|1982358_1983417_+	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_010930726.1|1983379_1985209_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003810356.1|1985248_1985821_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_015041331.1|1987245_1988157_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
WP_010930728.1|1988385_1989708_+	isocitrate lyase	NA	NA	NA	NA	NA
WP_010930729.1|1990067_1990703_+	membrane protein	NA	NA	NA	NA	NA
WP_010930730.1|1990662_1991613_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|1992483_1993356_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|1993433_1994573_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_029443722.1|1994922_1996188_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|1996193_1996721_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|1996725_1997544_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|1997543_1998266_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|1998287_1998602_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_029443721.1|1998598_1999768_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|1999798_2000674_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2000670_2001990_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2002062_2003259_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2003269_2004757_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2007351_2008251_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2008388_2009354_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2009452_2010403_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068978.1|2010446_2010638_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2010624_2011575_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2023071	2072467	4110590	transposase	Erysipelothrix_phage(16.67%)	45	NA	NA
WP_005013747.1|2023071_2024022_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2025159_2025456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2025630_2026983_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2027125_2028142_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2030121_2031135_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2031221_2032127_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2032283_2032628_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2032785_2033244_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2033257_2035474_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2035470_2036532_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2036560_2037535_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2037486_2038305_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2038317_2038926_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2039100_2039496_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2039514_2040954_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2040982_2041330_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2041348_2042299_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154299520.1|2042285_2042447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2042951_2043902_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997035.1|2043985_2045803_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_019247659.1|2045876_2046524_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2046536_2047466_-	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_014905663.1|2047635_2048100_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816977.1|2048347_2049028_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003816975.1|2049076_2050768_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_010930760.1|2050783_2051335_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816971.1|2051331_2051703_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930761.1|2051815_2052652_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_029443822.1|2052662_2053187_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2053284_2053464_+	DUF3008 family protein	NA	NA	NA	NA	NA
WP_076879571.1|2053593_2054625_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003816964.1|2054698_2055055_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930764.1|2055044_2055920_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010930765.1|2056018_2056903_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930766.1|2056924_2058220_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_003816959.1|2059168_2059819_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930767.1|2059906_2061427_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930768.1|2061684_2063550_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2064595_2065546_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930769.1|2066518_2066878_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2066865_2068302_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2068298_2068952_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_076879572.1|2068948_2070148_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2070245_2071520_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2071516_2072467_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2083671	2124362	4110590	tRNA,transposase,protease	Klosneuvirus(25.0%)	37	NA	NA
WP_005013747.1|2083671_2084622_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2084720_2085671_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2085630_2086044_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2086328_2086628_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816717.1|2087037_2089206_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
WP_124740709.1|2089785_2089980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2090005_2092036_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2092055_2092268_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2092545_2093085_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010930785.1|2093198_2094506_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2094570_2095728_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2095911_2096811_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2096829_2098134_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2098099_2099206_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2099293_2099530_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2099668_2100739_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2100742_2102098_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2102124_2103285_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2103287_2103926_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930792.1|2103927_2105232_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2105272_2106568_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2106574_2107081_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2107077_2108226_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2108253_2108679_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2109001_2111884_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2111976_2112732_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2113497_2114847_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2114945_2115896_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930048.1|2115994_2116945_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930594.1|2117018_2117492_+	RidA family protein	NA	NA	NA	NA	NA
WP_010930593.1|2117517_2118726_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_003816734.1|2118722_2119496_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_014905757.1|2119495_2120119_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_010926757.1|2120284_2120545_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_010930591.1|2120848_2121430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004568544.1|2121496_2121751_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930590.1|2121737_2124362_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 19
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2152145	2217694	4110590	tRNA,transposase,protease	Lake_Baikal_phage(20.0%)	59	NA	NA
WP_010929577.1|2152145_2153096_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302779.1|2153082_2153241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930573.1|2153296_2154106_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005013747.1|2154230_2155181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2155177_2156071_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2156195_2156390_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2156389_2156731_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2156740_2158603_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2158732_2159245_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2159247_2159571_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2159572_2159983_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2160020_2161232_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2161249_2161762_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2161977_2162469_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2162721_2164758_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2164835_2166038_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003812472.1|2166088_2166817_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
WP_010929591.1|2168374_2169325_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2169895_2170108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2170125_2170857_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2170891_2171533_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_023853213.1|2171525_2172242_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2174406_2175183_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2175204_2176362_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2176358_2176790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015063637.1|2176786_2177590_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_029443773.1|2177603_2178059_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2178071_2179043_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2179108_2180332_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2180559_2181510_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2181633_2184087_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2184275_2185580_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2185684_2186338_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2186340_2187651_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|2187829_2188408_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2188519_2188720_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2189065_2189632_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2189715_2189919_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2190225_2190546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2190587_2190869_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2190943_2192200_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2192582_2192912_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2194482_2195304_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2195303_2196443_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2196449_2197346_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2197342_2199268_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2199627_2202240_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2202292_2204593_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2204589_2205798_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|2206059_2206434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2206430_2207381_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2207479_2209474_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2209533_2210499_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2210488_2213350_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2213352_2213859_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2213963_2215172_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2215173_2216112_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2216273_2216747_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2216743_2217694_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2510292	2568536	4110590	tRNA,transposase	Planktothrix_phage(28.57%)	54	NA	NA
WP_005012067.1|2510292_2511243_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2511722_2512379_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2512393_2514061_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2514063_2514693_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2514904_2515999_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2516143_2516956_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_023853502.1|2516959_2518663_-	FimV N-terminal domain protein	NA	NA	NA	NA	NA
WP_010930382.1|2518713_2519844_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2520030_2521107_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2521188_2521839_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_023853504.1|2521853_2523287_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2523540_2524359_-	solute-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2524355_2525060_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2525959_2527075_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2527108_2527483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2527505_2528663_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2528675_2528909_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2529543_2532513_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2532527_2532737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2532888_2533518_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029443766.1|2533514_2535632_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_010930372.1|2535628_2536309_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2536305_2536866_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2536872_2537970_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_077274082.1|2538107_2538716_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2538712_2540005_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2540018_2540561_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2540570_2541407_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2541440_2542502_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2542543_2543596_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2543611_2543914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2544055_2545006_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023996304.1|2544992_2545151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930368.1|2545184_2546879_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2546875_2547961_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2548008_2548908_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2548918_2549563_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2550584_2553827_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_010930365.1|2553837_2554935_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
WP_003819864.1|2555197_2556181_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
WP_076879624.1|2556279_2557230_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2557328_2558279_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930362.1|2558288_2558978_-	VIT family protein	NA	NA	NA	NA	NA
WP_003811741.1|2559037_2559475_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2559520_2560414_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2560461_2561634_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2561630_2562785_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2562981_2563332_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2563321_2563756_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2563772_2564723_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2564870_2565338_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2565318_2566476_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2566541_2567468_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2567585_2568536_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2610816	2677316	4110590	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2610816_2611767_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2612136_2612709_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2612711_2613722_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2613714_2614215_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2614225_2614567_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_015041547.1|2614578_2615370_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2615386_2615656_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2615678_2616467_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2616513_2617530_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2617746_2619189_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2619367_2620987_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2621107_2622928_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2623006_2624539_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2624572_2626219_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2626288_2627311_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2627328_2628462_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2628464_2629154_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2629153_2629939_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2629982_2630747_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2630785_2632207_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2632272_2632977_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2633024_2633444_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2633456_2633864_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2634047_2634758_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2634884_2635175_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2635192_2635675_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2640180_2641335_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2641640_2642657_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2642903_2643692_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2643758_2644439_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2644435_2645206_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2645304_2646255_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2646310_2647228_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2647238_2648417_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2648436_2649432_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2651020_2651629_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2651616_2652657_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2652674_2653637_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2653633_2654827_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2654823_2655621_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2655646_2656633_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2656651_2658691_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2658892_2659573_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2659586_2660498_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2660494_2661073_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2661211_2662117_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2662124_2665544_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2665531_2668132_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2669087_2669720_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2670113_2670872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2670868_2672071_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2672258_2673209_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2674116_2675262_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930309.1|2675281_2676004_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2676120_2676300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2676365_2677316_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2840930	2906514	4110590	tRNA,transposase	Oenococcus_phage(33.33%)	53	NA	NA
WP_023853639.1|2840930_2841881_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|2841979_2842930_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930231.1|2843132_2844122_+	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_010930230.1|2844205_2844559_+	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930229.1|2844636_2845245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811662.1|2846918_2847497_-	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_003811660.1|2847521_2848475_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930228.1|2848514_2849432_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033446252.1|2849553_2850480_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930226.1|2850487_2851234_-	aldolase	NA	NA	NA	NA	NA
WP_010930225.1|2851560_2852502_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_003811651.1|2852577_2852700_-	membrane protein	NA	NA	NA	NA	NA
WP_010930224.1|2852728_2854426_-	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930223.1|2854860_2856282_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930222.1|2856435_2857215_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930221.1|2857339_2858212_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930220.1|2858323_2859448_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_003811636.1|2859493_2860456_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930219.1|2860448_2861303_+	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811632.1|2861410_2861821_+	VOC family protein	NA	NA	NA	NA	NA
WP_010929956.1|2861817_2862768_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813574.1|2862866_2863748_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003821443.1|2863825_2865205_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930218.1|2865243_2866089_-	membrane protein	NA	NA	NA	NA	NA
WP_003813580.1|2866104_2866449_-	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930217.1|2866451_2866988_-	membrane protein	NA	NA	NA	NA	NA
WP_003813585.1|2867160_2867736_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_003813586.1|2867838_2868576_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_010930216.1|2868643_2870281_-	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_019247742.1|2870388_2871144_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930214.1|2871131_2872094_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_003813594.1|2872195_2872996_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930213.1|2873057_2875133_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_010930212.1|2875297_2877673_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930211.1|2877753_2879109_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003813618.1|2880587_2881310_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930207.1|2881364_2882348_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|2882477_2883428_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813621.1|2883424_2884327_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930206.1|2884414_2885173_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248962.1|2885185_2886334_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_003813626.1|2886374_2887802_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_010930204.1|2888031_2889246_-	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813631.1|2889291_2892162_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930202.1|2894572_2895061_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930201.1|2895186_2897883_+	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930200.1|2898037_2900320_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930199.1|2900484_2901117_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010930198.1|2901215_2902166_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812405.1|2902212_2902767_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_003816844.1|2902834_2903680_-	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_019248398.1|2903749_2904718_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_023853221.1|2904717_2906514_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2924084	2983978	4110590	tRNA,holin,transposase	Catovirus(22.22%)	50	NA	NA
WP_010930190.1|2924084_2925605_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010930189.1|2925647_2925950_+	membrane protein	NA	NA	NA	NA	NA
WP_003812436.1|2925946_2926579_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930188.1|2926657_2928523_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_010930187.1|2928519_2929335_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
WP_010930186.1|2929342_2930458_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930185.1|2931362_2932241_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930184.1|2932240_2933065_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010929591.1|2933232_2934183_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879621.1|2934365_2937245_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003812697.1|2937226_2938003_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_019248549.1|2938095_2939559_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930180.1|2939555_2939927_-	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|2939944_2941258_+	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_003812703.1|2941294_2941753_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2941865_2942816_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930178.1|2942812_2943826_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_003812707.1|2943965_2944952_+	homoserine kinase	NA	NA	NA	NA	NA
WP_010930177.1|2944995_2945796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2946598_2947549_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995509.1|2947535_2947697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809618.1|2947700_2948303_-	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010930175.1|2948321_2948954_+	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930174.1|2949191_2951078_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930173.1|2951096_2951939_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_003819875.1|2951935_2953294_+	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_003809629.1|2953514_2954309_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930172.1|2954539_2956033_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_010930171.1|2956268_2958350_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_014486066.1|2958544_2959585_+	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930169.1|2959719_2960736_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_003809638.1|2960757_2961615_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930167.1|2961659_2962436_+	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_005013747.1|2962803_2963754_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809441.1|2963780_2964245_-	barstar family protein	NA	NA	NA	NA	NA
WP_014486065.1|2965451_2967740_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930165.1|2967856_2968729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930164.1|2968771_2969926_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930163.1|2969960_2970791_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_023853525.1|2970874_2972419_+	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930161.1|2972461_2972821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003819794.1|2972822_2973236_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003809432.1|2973276_2973594_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003809431.1|2973678_2974395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930160.1|2974658_2976080_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_019248433.1|2976146_2978894_-	pertactin autotransporter	NA	NA	NA	NA	NA
WP_023853536.1|2979226_2980243_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930157.1|2980578_2981220_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_003809423.1|2981310_2982747_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_023853534.1|2982904_2983978_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
>prophage 24
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	2988864	3124023	4110590	tRNA,transposase	uncultured_Caudovirales_phage(10.0%)	119	NA	NA
WP_010931363.1|2988864_2989881_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_015041211.1|2990818_2992246_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010930151.1|2992242_2993265_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_003809396.1|2993254_2993728_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_023995116.1|2993853_2994756_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_014486064.1|2994752_2996396_+	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_003819773.1|2996392_2997400_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010931363.1|2998230_2999247_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003817162.1|2999346_2999979_-	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_003811911.1|2999987_3000377_-	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_010930146.1|3000429_3001482_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_010930145.1|3002345_3004052_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_003811919.1|3004125_3004626_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930144.1|3004640_3006698_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_019247393.1|3006724_3007018_-	response regulator	NA	NA	NA	NA	NA
WP_003817154.1|3007119_3008067_-	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_003811927.1|3008079_3008955_-	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003811929.1|3009075_3009636_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_010930143.1|3009670_3009994_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811933.1|3010429_3011167_+	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_005012067.1|3011465_3012416_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809486.1|3012659_3012923_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_003819817.1|3012996_3013278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|3013294_3014155_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003809479.1|3014151_3014487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930141.1|3014540_3015191_-	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_019247197.1|3016871_3017816_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003809467.1|3017861_3018179_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930139.1|3018181_3019120_-	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003819814.1|3019297_3019783_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930138.1|3019801_3020350_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_023994624.1|3020381_3020534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853531.1|3020626_3021760_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443834.1|3021797_3022505_+	glutathione transferase	NA	NA	NA	NA	NA
WP_010930136.1|3022659_3025008_+	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_003809454.1|3025004_3025943_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930135.1|3025968_3027159_+	acetate kinase	NA	NA	NA	NA	NA
WP_010930134.1|3027155_3027929_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930133.1|3027958_3029152_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930132.1|3029269_3030280_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930131.1|3030297_3032334_-	transketolase	NA	NA	NA	NA	NA
WP_010930130.1|3032528_3033269_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010929584.1|3033367_3034318_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003817151.1|3034360_3035536_+	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010930129.1|3035757_3037548_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_010930128.1|3037560_3039222_-	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930127.1|3039234_3041940_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_003817147.1|3042232_3043987_+	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930126.1|3043983_3044610_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003811948.1|3044606_3045458_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_019248379.1|3045533_3047648_+	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_023853098.1|3047798_3048449_+	SCO family protein	NA	NA	NA	NA	NA
WP_010930123.1|3048594_3048846_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_014486063.1|3048915_3050298_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930121.1|3050294_3053474_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_029443805.1|3054281_3055199_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930119.1|3055250_3055982_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_010926548.1|3056041_3056614_+	chorismate lyase	NA	NA	NA	NA	NA
WP_010929632.1|3058122_3059139_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|3059276_3060326_-	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_005012067.1|3060430_3061381_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813314.1|3061476_3062202_-	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_003813315.1|3062412_3062793_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_014905652.1|3063098_3063971_+	EamA family transporter	NA	NA	NA	NA	NA
WP_023852686.1|3063978_3064359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852693.1|3064512_3065787_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_010930113.1|3067274_3068183_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_010930112.1|3068980_3070045_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_003821528.1|3071881_3072916_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003813333.1|3073105_3073747_-	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821527.1|3073829_3075656_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010930111.1|3075899_3076829_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_010930110.1|3076828_3077578_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_003821521.1|3077649_3078564_-	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930108.1|3078583_3079729_+	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_014486062.1|3079789_3080701_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_005012067.1|3080781_3081732_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446303.1|3081830_3082415_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003821513.1|3082449_3083439_-	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_010930105.1|3083435_3084377_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_010930104.1|3084373_3085594_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930103.1|3085636_3085951_-	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930102.1|3086142_3086502_-	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_003821510.1|3086503_3088234_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930100.1|3088406_3089078_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930099.1|3089092_3090421_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930098.1|3090417_3091317_-	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930097.1|3091403_3092489_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930096.1|3092481_3093615_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930095.1|3093614_3096296_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930094.1|3096666_3097248_+	OmpA family protein	NA	NA	NA	NA	NA
WP_077274086.1|3097325_3098099_+	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
WP_010930092.1|3098095_3098773_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930091.1|3098988_3100170_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930090.1|3100942_3101125_+	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_005012808.1|3101154_3102105_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_124740670.1|3102091_3102346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004566317.1|3102234_3102627_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_003821497.1|3102903_3103815_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_010930088.1|3103939_3104914_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|3104910_3105861_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810865.1|3105959_3107045_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_010930072.1|3107142_3107553_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810859.1|3108168_3110082_+	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930071.1|3110217_3112830_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_019248496.1|3112831_3113566_-	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_003810851.1|3113729_3114911_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003810850.1|3114907_3115120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930069.1|3115116_3116097_-	aldo/keto reductase	NA	NA	NA	NA	NA
WP_010930068.1|3116142_3116970_-	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930067.1|3117116_3118934_+	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_003810840.1|3118988_3119372_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930066.1|3119368_3120319_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810839.1|3120431_3120683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810837.1|3120876_3121092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|3121188_3122307_-	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810832.1|3122426_3122639_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930064.1|3122798_3123020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3123072_3124023_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	3237344	3306347	4110590	transposase	Klosneuvirus(16.67%)	57	NA	NA
WP_041337087.1|3237344_3238295_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813068.1|3238291_3239311_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
WP_010930049.1|3239320_3242029_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
WP_010930050.1|3242176_3242833_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
WP_154219863.1|3242792_3242945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3242931_3243882_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930014.1|3243987_3244923_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_010930013.1|3245122_3246817_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010930012.1|3246851_3247778_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930011.1|3247846_3248944_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003818996.1|3248962_3249826_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
WP_010930010.1|3249837_3250620_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004566042.1|3250616_3251735_+	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010930009.1|3251731_3253264_+	acyl--CoA ligase	NA	NA	NA	NA	NA
WP_003818991.1|3253304_3254312_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_023999677.1|3254456_3255179_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930007.1|3255194_3256217_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_010930006.1|3256533_3257268_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930005.1|3257352_3259098_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_010930004.1|3259094_3259847_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930003.1|3259891_3260848_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003818983.1|3260936_3261503_+	membrane protein	NA	NA	NA	NA	NA
WP_010930002.1|3261510_3262371_-	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_010930001.1|3262400_3263144_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
WP_003807497.1|3263160_3263844_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010930000.1|3264681_3265596_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929999.1|3265660_3266569_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929998.1|3266659_3268084_-	TolC family protein	NA	NA	NA	NA	NA
WP_010929997.1|3268085_3269408_-	cyclolysin T1SS periplasmic adaptor subunit CyaD	NA	NA	NA	NA	NA
WP_010929996.1|3269404_3271543_-	cyclolysin T1SS permease/ATPase CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
WP_010929995.1|3271620_3276741_-	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
WP_153302771.1|3276841_3277150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929994.1|3277219_3277777_+	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_010929993.1|3277792_3279274_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_023853308.1|3279328_3281182_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929992.1|3281444_3282782_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929991.1|3282816_3284814_-	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929990.1|3284831_3286880_-	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929989.1|3287010_3287877_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929988.1|3288145_3289111_-	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929987.1|3289225_3290374_-	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_003807462.1|3290798_3291110_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_003807460.1|3291143_3291404_+	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807459.1|3291553_3292687_+	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807457.1|3292757_3293894_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_010925762.1|3294059_3294854_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807452.1|3294916_3295360_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3295475_3296426_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068980.1|3296412_3296601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020699729.1|3296548_3296956_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929984.1|3297028_3299224_+	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3299445_3300396_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852739.1|3300355_3300880_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003814467.1|3301011_3301983_+	FecR family protein	NA	NA	NA	NA	NA
WP_010929983.1|3302102_3304547_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_010929982.1|3304562_3305153_-	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|3305396_3306347_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	3321793	3421906	4110590	terminase,transposase,tRNA,tail,protease	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
WP_005012067.1|3321793_3322744_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814437.1|3323475_3323853_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_003814436.1|3323837_3324539_-	membrane protein	NA	NA	NA	NA	NA
WP_010931409.1|3324682_3325375_-	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_010931410.1|3325374_3326478_-	phosphotransferase	NA	NA	NA	NA	NA
WP_010931411.1|3326587_3328960_+	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931412.1|3328956_3330516_+	chaperone SurA	NA	NA	NA	NA	NA
WP_010931413.1|3330540_3331338_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931414.1|3331369_3332515_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_003814419.1|3332619_3334062_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_003814416.1|3334064_3335153_-	spore maturation protein	NA	NA	NA	NA	NA
WP_005012808.1|3337431_3338382_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879618.1|3338368_3338587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|3339511_3340069_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247923.1|3340044_3340395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814657.1|3340563_3341358_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_010931416.1|3341354_3342404_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814652.1|3342403_3343093_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003814650.1|3343179_3343677_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_010931417.1|3343708_3345025_-	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_010931418.1|3345041_3346016_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_003814643.1|3346052_3346511_-	protein TolR	NA	NA	NA	NA	NA
WP_003814641.1|3346510_3347191_-	protein TolQ	NA	NA	NA	NA	NA
WP_010931419.1|3347193_3347622_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814636.1|3347674_3349405_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_003814635.1|3349470_3350043_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_010931420.1|3350023_3350710_+	response regulator	NA	NA	NA	NA	NA
WP_010931421.1|3351065_3351737_+	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
WP_010926433.1|3352286_3352568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_076879540.1|3352564_3353098_-	DUF2514 family protein	NA	NA	NA	NA	NA
WP_010931424.1|3353079_3353631_-	lysozyme	NA	NA	NA	NA	NA
WP_010931425.1|3353609_3353852_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931426.1|3353856_3354669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926428.1|3354668_3354932_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740660.1|3354972_3355170_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931428.1|3355150_3355567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931429.1|3355571_3359528_-	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
WP_010931430.1|3359520_3359910_-	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931431.1|3359906_3360440_-	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931432.1|3360507_3360867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931433.1|3360876_3363489_-|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931434.1|3363514_3363805_-	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_003813412.1|3363822_3364152_-	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931435.1|3364161_3364680_-	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_010931436.1|3364934_3365435_-	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931437.1|3365442_3365865_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931438.1|3365861_3366260_-	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931439.1|3366256_3366652_-	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931440.1|3366651_3366852_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|3366853_3367336_-	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931442.1|3367398_3367650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853024.1|3367659_3368307_-	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_005012808.1|3368324_3369275_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931443.1|3369703_3370306_-	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_010931444.1|3370428_3370671_-	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931445.1|3370676_3371732_-	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931446.1|3371760_3373179_-	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931447.1|3373181_3374459_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931448.1|3374445_3374895_-|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_005012067.1|3375570_3376521_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853183.1|3376538_3376760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|3376774_3377473_+	membrane protein	NA	NA	NA	NA	NA
WP_010931450.1|3377465_3377786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|3378265_3378877_+	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931452.1|3378942_3379155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3379406_3380357_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248926.1|3380455_3381529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931475.1|3381696_3382491_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925795.1|3382530_3383055_-	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931474.1|3383047_3384790_-	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010931473.1|3384999_3385758_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931472.1|3385760_3386468_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931471.1|3386484_3387366_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019247734.1|3387376_3388135_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_019248554.1|3388103_3388859_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931468.1|3388928_3390347_+	amidase	NA	NA	NA	NA	NA
WP_003819076.1|3390368_3391019_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_033446132.1|3391152_3391488_-	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_023995786.1|3391428_3391590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930800.1|3391576_3392527_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931467.1|3392603_3394424_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010931466.1|3394428_3395502_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_003814230.1|3395624_3396593_+	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010927008.1|3396666_3397578_+	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814226.1|3397596_3398169_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010931465.1|3398249_3398798_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_010931464.1|3398797_3400387_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_003814221.1|3400456_3400696_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_003814219.1|3400736_3401768_-|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814217.1|3401827_3403009_-	UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase	NA	NA	NA	NA	NA
WP_010931463.1|3403105_3403558_+	membrane protein	NA	NA	NA	NA	NA
WP_010931462.1|3403567_3404908_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931461.1|3405224_3406262_+	sodium:calcium antiporter	NA	NA	NA	NA	NA
WP_003814209.1|3406643_3407003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041166340.1|3407086_3408028_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879617.1|3408102_3409053_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814206.1|3409346_3410441_+	porin	NA	NA	NA	NA	NA
WP_003814205.1|3410522_3411404_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814203.1|3411425_3412265_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_010931459.1|3412340_3413858_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_010931458.1|3413954_3415055_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931457.1|3415071_3415494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814195.1|3415516_3415729_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931456.1|3415775_3416696_-	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814191.1|3416959_3417628_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_003814188.1|3417630_3417960_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931454.1|3418166_3419600_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814185.1|3419611_3419995_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931453.1|3420056_3420857_+	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_154219861.1|3420804_3420969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015810.1|3420955_3421906_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	3708523	3841449	4110590	tRNA,integrase,transposase	uncultured_Mediterranean_phage(10.34%)	120	3753166:3753183	3797806:3797823
WP_005013747.1|3708523_3709474_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929878.1|3709470_3710106_-	LysE family transporter	NA	NA	NA	NA	NA
WP_003818466.1|3710235_3711135_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_003807278.1|3711230_3711722_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
WP_010929877.1|3711768_3712734_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929876.1|3713867_3715109_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.9	1.9e-14
WP_003807287.1|3715222_3716239_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	43.8	3.5e-75
WP_010929875.1|3716273_3716750_-	membrane protein	NA	NA	NA	NA	NA
WP_003807291.1|3716892_3717801_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929874.1|3717914_3719027_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.0	1.9e-21
WP_003818475.1|3719127_3719661_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818477.1|3719749_3721000_+	kynureninase	NA	NA	NA	NA	NA
WP_003807300.1|3721101_3721614_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.3	8.5e-22
WP_076879639.1|3721519_3721726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3721712_3722663_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929873.1|3722728_3723667_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	35.7	1.4e-09
WP_010929872.1|3723689_3724316_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_003818481.1|3724312_3724969_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_010929871.1|3724965_3725568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003807309.1|3725574_3726201_-	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	23.3	1.5e-07
WP_010929869.1|3726342_3726912_+	bacterioferritin	NA	NA	NA	NA	NA
WP_003807313.1|3726982_3728302_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_003807315.1|3728408_3728600_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_010929868.1|3728851_3730141_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929867.1|3730295_3731291_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807322.1|3731375_3732050_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|3732046_3732997_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068983.1|3732983_3733166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816336.1|3733158_3734400_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.2	4.0e-25
WP_010929866.1|3734396_3735341_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	33.3	9.5e-27
WP_005012067.1|3735459_3736410_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853484.1|3736369_3737299_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807759.1|3737352_3737688_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_010929865.1|3737732_3738497_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929864.1|3738520_3739261_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019248486.1|3739268_3740843_-	acyl--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.6	2.0e-13
WP_010929862.1|3740856_3741834_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929861.1|3742106_3742706_-	ureidoglycolate hydrolase	NA	NA	NA	NA	NA
WP_094145972.1|3742739_3749642_-	autotransporter BatB	NA	NA	NA	NA	NA
WP_003807750.1|3750088_3750220_-	entericidin A/B family lipoprotein	NA	NA	NA	NA	NA
WP_019248159.1|3750251_3750413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929858.1|3750485_3750692_-	DUF3596 domain-containing protein	NA	NA	NA	NA	NA
WP_010929857.1|3751696_3752356_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010929856.1|3752383_3753529_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
3753166:3753183	attL	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_003807743.1|3753669_3754005_+	YegP family protein	NA	NA	NA	NA	NA
WP_010929855.1|3754079_3754940_-	hypothetical protein	NA	A0A2C9D0H9	Yersinia_phage	53.6	1.7e-51
WP_010929854.1|3755203_3755905_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_019248860.1|3756074_3756470_+	RidA family protein	NA	NA	NA	NA	NA
WP_005012067.1|3756579_3757530_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929852.1|3757540_3758182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926414.1|3758348_3758591_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929851.1|3758689_3759640_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929850.1|3759675_3760143_+	hypothetical protein	NA	Q3HQX1	Burkholderia_phage	71.3	2.1e-43
WP_010926411.1|3760376_3760754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926410.1|3760750_3760933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929849.1|3760936_3761923_+	DNA recombinase	NA	H9C0R8	Aeromonas_phage	57.3	2.0e-67
WP_010929848.1|3761919_3762567_+	YqaJ viral recombinase family protein	NA	A0A0U2BXF3	Paracoccus_phage	41.4	2.0e-31
WP_010929847.1|3762624_3763152_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929846.1|3763185_3764373_+	hypothetical protein	NA	A0A291L9X3	Bordetella_phage	37.8	1.5e-24
WP_023853043.1|3764362_3764725_+	hypothetical protein	NA	A0A0H5ARN8	Pseudomonas_phage	47.9	1.8e-13
WP_010929844.1|3764717_3764837_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010926403.1|3764837_3765038_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929843.1|3765034_3766024_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.4	4.4e-75
WP_010929841.1|3767510_3769481_-	DUF3220 domain-containing protein	NA	NA	NA	NA	NA
WP_003814626.1|3769722_3770121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929840.1|3770129_3771053_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3771510_3772461_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927254.1|3772691_3774383_-	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_003816027.1|3774431_3774704_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_003816026.1|3774700_3775072_-	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816025.1|3775167_3775302_-	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_010929554.1|3775707_3777117_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816023.1|3777113_3778229_+	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.6e-41
WP_010929838.1|3778323_3780777_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_023853625.1|3780895_3781687_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929836.1|3781806_3783234_+	amidase	NA	NA	NA	NA	NA
WP_010929835.1|3783272_3784244_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929834.1|3784662_3785826_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929833.1|3785913_3786759_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995443.1|3788188_3788329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3788315_3789266_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818201.1|3789820_3790195_-	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929807.1|3790269_3791328_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005012067.1|3791351_3792302_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929808.1|3795183_3796353_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_003815953.1|3796453_3798061_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
3797806:3797823	attR	CAGCGTGCTGGCCACCGT	NA	NA	NA	NA
WP_010929810.1|3798107_3800129_+	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815955.1|3800157_3800403_-	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_004565905.1|3800416_3801607_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_010929811.1|3801802_3802768_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929812.1|3802790_3803930_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929813.1|3804141_3805104_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929814.1|3805227_3807252_+	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929815.1|3807448_3809692_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_003815964.1|3809970_3810429_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929816.1|3811356_3813978_-	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_010929817.1|3814041_3816669_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929818.1|3816820_3817885_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815975.1|3817881_3818655_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929819.1|3818663_3819497_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003818225.1|3819509_3820289_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003818226.1|3820323_3821796_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929821.1|3821823_3822582_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929822.1|3822637_3824488_-	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929823.1|3824581_3825058_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_023853391.1|3825074_3825995_-	bestrophin	NA	NA	NA	NA	NA
WP_003818232.1|3826101_3826602_+	SET domain-containing protein	NA	NA	NA	NA	NA
WP_010929826.1|3826975_3827668_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_153302770.1|3827822_3827990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3827976_3828927_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931556.1|3828923_3832697_-	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010931557.1|3833033_3834923_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931558.1|3834934_3835828_+	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_003817654.1|3835853_3836729_+	thiazole synthase	NA	NA	NA	NA	NA
WP_010931560.1|3836725_3837577_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003817656.1|3837638_3838319_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_019247189.1|3838346_3838682_+	TolC family protein	NA	NA	NA	NA	NA
WP_019247190.1|3838682_3839642_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_003815102.1|3839662_3840151_-	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_010931561.1|3840432_3841449_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP016958	Bordetella pertussis strain E537, complete genome	4110590	4008609	4073521	4110590	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|4008609_4009095_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4009183_4009321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4009313_4010294_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4010560_4011370_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4011409_4012090_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4012083_4012542_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4012553_4012916_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4012998_4013682_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4013737_4014046_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4014064_4014379_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4014375_4016850_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4016857_4018249_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4018245_4018431_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4018409_4019111_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4019107_4019929_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4019909_4021034_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4021026_4022046_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_024000452.1|4022251_4023286_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4023386_4024178_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4024260_4024635_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4024612_4026022_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4026014_4027397_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4027731_4029336_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077274089.1|4029371_4030385_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4030395_4031322_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4031712_4032663_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4032832_4034059_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4034258_4035125_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4035117_4036080_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4036180_4037131_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4037229_4038180_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4038278_4039229_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4039225_4040719_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4040715_4043823_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4043819_4046888_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4046884_4048135_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4048315_4049077_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4049109_4049760_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4049762_4050602_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4050842_4051586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4051668_4052016_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4052113_4052956_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4053000_4053888_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4053914_4054103_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4054200_4055658_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4055644_4057171_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4057189_4057657_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4057656_4058679_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4058799_4059540_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4059594_4060695_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4060696_4061887_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4062006_4063023_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4063341_4064013_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4064009_4064918_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4065129_4065777_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4069628_4070705_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4070715_4071525_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4071614_4072388_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023996063.1|4072407_4072584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929577.1|4072570_4073521_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
