assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002285715.1_ASM228571v1	NZ_CP023147	Mycobacterium marseillense strain FLAC0026 chromosome, complete genome	1	424190-424269	1	CRISPRCasFinder	no	cas3	csa3,DEDDh,cas3,DinG,WYL	Unclear	GCGGGTCGCCGCCATCGGGCTAGTG	25	0	0	NA	NA	NA	1	1	Unclear	csa3,DEDDh,cas3,DinG,WYL	NA|197aa|up_8|NZ_CP023147.1_411192_411783_+,NA|580aa|up_4|NZ_CP023147.1_417943_419683_-,NA|87aa|down_5|NZ_CP023147.1_429754_430015_-	NA|68aa|up_9|NZ_CP023147.1_410815_411019_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|197aa|up_8|NZ_CP023147.1_411192_411783_+	NA	NA|938aa|up_7|NZ_CP023147.1_411986_414800_+	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|554aa|up_6|NZ_CP023147.1_414796_416458_-	cd07302, CHD, cyclase homology domain	NA|411aa|up_5|NZ_CP023147.1_416556_417789_+	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated	NA|580aa|up_4|NZ_CP023147.1_417943_419683_-	NA	NA|315aa|up_3|NZ_CP023147.1_419726_420671_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|114aa|up_2|NZ_CP023147.1_420667_421009_-	pfam10066, DUF2304, Uncharacterized conserved protein (DUF2304)	NA|233aa|up_1|NZ_CP023147.1_421005_421704_-	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|418aa|up_0|NZ_CP023147.1_421748_423002_-	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|462aa|down_0|NZ_CP023147.1_424869_426255_+	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family	NA|349aa|down_1|NZ_CP023147.1_426251_427298_+	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|321aa|down_2|NZ_CP023147.1_427276_428239_+	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|204aa|down_3|NZ_CP023147.1_428289_428901_+	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|248aa|down_4|NZ_CP023147.1_428961_429705_-	COG2968, COG2968, Uncharacterized conserved protein [Function unknown]	NA|87aa|down_5|NZ_CP023147.1_429754_430015_-	NA	NA|268aa|down_6|NZ_CP023147.1_430146_430950_-	pfam17765, MLTR_LBD, MmyB-like transcription regulator ligand binding domain	NA|526aa|down_7|NZ_CP023147.1_431096_432674_-	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|338aa|down_8|NZ_CP023147.1_432707_433721_-	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family	NA|396aa|down_9|NZ_CP023147.1_433720_434908_-	COG2141, COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]
GCF_002285715.1_ASM228571v1	NZ_CP023147	Mycobacterium marseillense strain FLAC0026 chromosome, complete genome	2	1859636-1859713	2	CRISPRCasFinder	no	csa3	csa3,DEDDh,cas3,DinG,WYL	Type I-A	CGCCGCGCTGGCGATCGCCACGG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA|74aa|up_5|NZ_CP023147.1_1852978_1853200_+,NA|93aa|up_0|NZ_CP023147.1_1859241_1859520_-,NA	NA|132aa|up_9|NZ_CP023147.1_1848537_1848933_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	csa3|134aa|up_8|NZ_CP023147.1_1848929_1849331_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|464aa|up_7|NZ_CP023147.1_1849538_1850930_+	PRK04173, PRK04173, glycyl-tRNA synthetase; Provisional	NA|410aa|up_6|NZ_CP023147.1_1851182_1852412_+	pfam00823, PPE, PPE family	NA|74aa|up_5|NZ_CP023147.1_1852978_1853200_+	NA	NA|659aa|up_4|NZ_CP023147.1_1853248_1855225_-	pfam04536, TPM_phosphatase, TPM domain	NA|426aa|up_3|NZ_CP023147.1_1855312_1856590_+	PRK03007, PRK03007, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|206aa|up_2|NZ_CP023147.1_1856657_1857275_+	COG2032, SodC, Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism]	NA|651aa|up_1|NZ_CP023147.1_1857305_1859258_+	PRK05667, dnaG, DNA primase; Validated	NA|93aa|up_0|NZ_CP023147.1_1859241_1859520_-	NA	NA|228aa|down_0|NZ_CP023147.1_1860003_1860687_-	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism]	NA|311aa|down_1|NZ_CP023147.1_1860689_1861622_-	TIGR01136, Cysteine_synthase, cysteine synthase	NA|268aa|down_2|NZ_CP023147.1_1862119_1862923_-	pfam09037, Sulphotransf, Stf0 sulphotransferase	NA|61aa|down_3|NZ_CP023147.1_1863086_1863269_-	TIGR01931, Sulfite_reductase_flavoprotein_alpha-component, sulfite reductase [NADPH] flavoprotein, alpha-component	NA|1415aa|down_4|NZ_CP023147.1_1863491_1867736_-	cd02754, MopB_Nitrate-R-NapA-like, Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite	NA|156aa|down_5|NZ_CP023147.1_1868066_1868534_+	pfam14041, Lipoprotein_21, LppP/LprE lipoprotein	NA|473aa|down_6|NZ_CP023147.1_1868864_1870283_+	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|651aa|down_7|NZ_CP023147.1_1870272_1872225_-	cd01150, AXO, Peroxisomal acyl-CoA oxidase	NA|790aa|down_8|NZ_CP023147.1_1872274_1874644_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|163aa|down_9|NZ_CP023147.1_1874757_1875246_-	pfam01047, MarR, MarR family
GCF_002285715.1_ASM228571v1	NZ_CP023147	Mycobacterium marseillense strain FLAC0026 chromosome, complete genome	3	2444941-2445053	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	GCCAGCGGCTGTGGGCCGACGCCGAGCGGTCGGCAGAC	38	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA|203aa|up_8|NZ_CP023147.1_2437856_2438465_-,NA|113aa|up_4|NZ_CP023147.1_2440687_2441026_+,NA|205aa|down_4|NZ_CP023147.1_2447775_2448390_+	NA|273aa|up_9|NZ_CP023147.1_2436951_2437770_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|203aa|up_8|NZ_CP023147.1_2437856_2438465_-	NA	NA|160aa|up_7|NZ_CP023147.1_2438698_2439178_-	pfam11578, DUF3237, Protein of unknown function (DUF3237)	NA|205aa|up_6|NZ_CP023147.1_2439274_2439889_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|143aa|up_5|NZ_CP023147.1_2439958_2440387_-	pfam00553, CBM_2, Cellulose binding domain	NA|113aa|up_4|NZ_CP023147.1_2440687_2441026_+	NA	NA|262aa|up_3|NZ_CP023147.1_2441220_2442006_-	COG3971, COG3971, 2-keto-4-pentenoate hydratase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|194aa|up_2|NZ_CP023147.1_2442188_2442770_-	pfam01872, RibD_C, RibD C-terminal domain	NA|217aa|up_1|NZ_CP023147.1_2443088_2443739_+	pfam01083, Cutinase, Cutinase	NA|275aa|up_0|NZ_CP023147.1_2443873_2444698_-	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family	NA|218aa|down_0|NZ_CP023147.1_2445301_2445955_-	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|119aa|down_1|NZ_CP023147.1_2445968_2446325_-	TIGR01552, Hypothetical_protein_Rv3357/MT3465/Mb3392	NA|189aa|down_2|NZ_CP023147.1_2446515_2447082_+	COG0545, FkpA, FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones]	NA|148aa|down_3|NZ_CP023147.1_2447111_2447555_-	pfam12680, SnoaL_2, SnoaL-like domain	NA|205aa|down_4|NZ_CP023147.1_2447775_2448390_+	NA	NA|254aa|down_5|NZ_CP023147.1_2448420_2449182_-	PRK06500, PRK06500, SDR family oxidoreductase	NA|153aa|down_6|NZ_CP023147.1_2449246_2449705_-	pfam13924, Lipocalin_5, Lipocalin-like domain	NA|228aa|down_7|NZ_CP023147.1_2449977_2450661_+	pfam11139, SfLAP, Sap, sulfolipid-1-addressing protein	NA|256aa|down_8|NZ_CP023147.1_2450712_2451480_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|412aa|down_9|NZ_CP023147.1_2451476_2452712_-	TIGR03106, trio_M42_hydro, hydrolase, peptidase M42 family
GCF_002285715.1_ASM228571v1	NZ_CP023147	Mycobacterium marseillense strain FLAC0026 chromosome, complete genome	4	4695777-4695855	4	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	CAGTGATGGCGGCGACCCGCTGCGC	25	1	2	4695802-4695830|4695802-4695830	NZ_CP023147.1_428932-428904|NZ_CP023147.1_1255898-1255926	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA|294aa|up_0|NZ_CP023147.1_4694861_4695743_+,NA|92aa|down_2|NZ_CP023147.1_4701869_4702145_+	NA|207aa|up_9|NZ_CP023147.1_4688198_4688819_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|273aa|up_8|NZ_CP023147.1_4688828_4689647_-	PRK08260, PRK08260, enoyl-CoA hydratase; Provisional	NA|341aa|up_7|NZ_CP023147.1_4689643_4690666_-	TIGR03617, F420_MSMEG_2256, probable F420-dependent oxidoreductase, MSMEG_2256 family	NA|213aa|up_6|NZ_CP023147.1_4690688_4691327_-	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only]	NA|377aa|up_5|NZ_CP023147.1_4691326_4692457_-	PRK13517, PRK13517, glutamate--cysteine ligase	NA|228aa|up_4|NZ_CP023147.1_4692446_4693130_-	COG2032, SodC, Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism]	NA|158aa|up_3|NZ_CP023147.1_4693263_4693737_-	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|103aa|up_2|NZ_CP023147.1_4693756_4694065_-	pfam11662, DUF3263, Protein of unknown function (DUF3263)	NA|198aa|up_1|NZ_CP023147.1_4694268_4694862_+	PRK00150, def, peptide deformylase; Reviewed	NA|294aa|up_0|NZ_CP023147.1_4694861_4695743_+	NA	NA|158aa|down_0|NZ_CP023147.1_4696807_4697281_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|1482aa|down_1|NZ_CP023147.1_4697302_4701748_+	cd07539, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporters	NA|92aa|down_2|NZ_CP023147.1_4701869_4702145_+	NA	NA|119aa|down_3|NZ_CP023147.1_4702173_4702530_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|236aa|down_4|NZ_CP023147.1_4702665_4703373_-	pfam03861, ANTAR, ANTAR domain	NA|543aa|down_5|NZ_CP023147.1_4703592_4705221_+	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|265aa|down_6|NZ_CP023147.1_4705357_4706152_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|210aa|down_7|NZ_CP023147.1_4706151_4706781_+	COG3571, COG3571, Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]	NA|145aa|down_8|NZ_CP023147.1_4706827_4707262_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|292aa|down_9|NZ_CP023147.1_4707279_4708155_+	TIGR03560, F420_Rv1855c, probable F420-dependent oxidoreductase, Rv1855c family
GCF_002285715.1_ASM228571v1	NZ_CP023147	Mycobacterium marseillense strain FLAC0026 chromosome, complete genome	5	4993668-4993748	5	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL	Orphan	AGTCATCGGCGCCGTTCCTCCTCATCGC	28	1	3	4993696-4993720|4993696-4993720|4993696-4993720	NZ_CP023147.1_1886656-1886632|NZ_CP023147.1_3397566-3397590|NZ_CP023147.1_3397619-3397643	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL	NA|49aa|up_2|NZ_CP023147.1_4990112_4990259_+,NA|474aa|down_2|NZ_CP023147.1_4995755_4997177_+,NA|237aa|down_9|NZ_CP023147.1_5003537_5004248_-	NA|347aa|up_9|NZ_CP023147.1_4983067_4984108_-	cd13431, LDT_IgD_like_1, IgD-like repeat domain of mycobacterial L,D-transpeptidases	NA|415aa|up_8|NZ_CP023147.1_4984226_4985471_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|97aa|up_7|NZ_CP023147.1_4985589_4985880_-	COG1937, COG1937, Uncharacterized protein conserved in bacteria [Function unknown]	NA|571aa|up_6|NZ_CP023147.1_4985988_4987701_+	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional	NA|147aa|up_5|NZ_CP023147.1_4987766_4988207_-	pfam03779, SPW, SPW repeat	NA|328aa|up_4|NZ_CP023147.1_4988322_4989306_+	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|219aa|up_3|NZ_CP023147.1_4989308_4989965_-	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only]	NA|49aa|up_2|NZ_CP023147.1_4990112_4990259_+	NA	NA|692aa|up_1|NZ_CP023147.1_4990300_4992376_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|171aa|up_0|NZ_CP023147.1_4992414_4992927_-	TIGR04338, hypothetical_protein, putative metallohydrolase, TIGR04338 family	NA|278aa|down_0|NZ_CP023147.1_4993796_4994630_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|344aa|down_1|NZ_CP023147.1_4994710_4995742_+	PRK08241, PRK08241, RNA polymerase subunit sigma-70	NA|474aa|down_2|NZ_CP023147.1_4995755_4997177_+	NA	NA|397aa|down_3|NZ_CP023147.1_4997262_4998453_-	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|293aa|down_4|NZ_CP023147.1_4998527_4999406_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|242aa|down_5|NZ_CP023147.1_4999431_5000157_+	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain	NA|468aa|down_6|NZ_CP023147.1_5000214_5001618_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|370aa|down_7|NZ_CP023147.1_5001697_5002807_+	pfam09992, NAGPA, Phosphodiester glycosidase	NA|234aa|down_8|NZ_CP023147.1_5002799_5003501_-	pfam06912, DUF1275, Protein of unknown function (DUF1275)	NA|237aa|down_9|NZ_CP023147.1_5003537_5004248_-	NA
