The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022989	Paraburkholderia aromaticivorans strain BN5 chromosome 1, complete sequence	4378888	408219	468944	4378888	bacteriocin,transposase,integrase	Escherichia_phage(20.0%)	60	400890:400905	429583:429598
400890:400905	attL	CGACATCGAAGTGTTC	NA	NA	NA	NA
WP_095417295.1|408219_409317_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_095417296.1|409326_409695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417297.1|409728_410751_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.7	6.2e-40
WP_095420176.1|413162_414361_-|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	65.6	5.2e-102
WP_157763702.1|415290_415458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417299.1|416196_418074_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_095417300.1|418079_419120_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_095417301.1|419250_420222_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_095417302.1|420337_421429_+	acyltransferase	NA	A9YX16	Burkholderia_phage	38.1	6.9e-53
WP_095420177.1|421438_422293_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_157763703.1|422511_423255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167397507.1|423353_425273_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_095417305.1|425269_426994_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_167397548.1|427003_427891_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_095417307.1|427939_429034_-	NAD(P)-dependent oxidoreductase	NA	M1IDV7	Acanthocystis_turfacea_Chlorella_virus	23.6	1.3e-11
WP_095417308.1|429114_430494_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
429583:429598	attR	GAACACTTCGATGTCG	NA	NA	NA	NA
WP_095420178.1|430483_431239_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_095417309.1|431380_432283_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	30.9	5.0e-25
WP_095417310.1|432279_432831_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	55.8	5.5e-51
WP_095417311.1|432815_433709_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	58.1	5.9e-95
WP_095417312.1|433719_434781_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	47.2	1.5e-84
WP_095417313.1|435240_436152_-	NAD-dependent epimerase/dehydratase family protein	NA	E5ES47	Bathycoccus_sp._RCC1105_virus	25.9	3.9e-09
WP_095420179.1|436356_437235_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_095417314.1|437321_438132_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_095417315.1|438279_439140_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_095417316.1|439201_440482_-	dihydroorotase	NA	NA	NA	NA	NA
WP_095417317.1|440596_441730_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q9G0F2	Phage_Gifsy-1	57.3	4.1e-117
WP_095417318.1|441872_442898_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.3	3.2e-28
WP_095417319.1|443095_443647_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_095417320.1|443633_444074_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_007178990.1|444070_444649_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_095417321.1|444901_446314_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006047743.1|446578_446749_-	rubredoxin	NA	NA	NA	NA	NA
WP_095417322.1|446816_447041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417323.1|447039_447900_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_095420180.1|448324_448951_+	adenylyl-sulfate kinase	NA	NA	NA	NA	NA
WP_095417324.1|449085_450726_-	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	61.5	3.9e-169
WP_007178996.1|450779_451070_-	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	40.4	3.6e-17
WP_095417325.1|451591_451873_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417326.1|451872_452313_+	DUF2471 domain-containing protein	NA	NA	NA	NA	NA
WP_095417327.1|452917_453250_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_095417328.1|453246_453702_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_157763705.1|453698_453860_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417329.1|453846_454932_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA	NA
WP_095417330.1|454928_455351_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.8	2.5e-51
WP_095417331.1|455350_456115_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	69.9	4.4e-91
WP_095417332.1|456244_456724_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_095417333.1|456758_457289_-	aspartate carbamoyltransferase	NA	NA	NA	NA	NA
WP_095417334.1|457321_457753_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_095417335.1|457754_458189_-	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_095417336.1|458203_458521_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_095420181.1|458755_459655_-	polyphosphate kinase 2 family protein	NA	NA	NA	NA	NA
WP_095417337.1|459755_460232_-	CreA family protein	NA	NA	NA	NA	NA
WP_095417338.1|461301_462267_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_157763706.1|462263_462548_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417341.1|463211_463445_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157763707.1|463533_463749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417343.1|464050_464575_+	universal stress protein	NA	NA	NA	NA	NA
WP_167397508.1|465246_465396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417344.1|468140_468944_+|bacteriocin	bacteriocin family protein	bacteriocin	NA	NA	NA	NA
>prophage 2
NZ_CP022989	Paraburkholderia aromaticivorans strain BN5 chromosome 1, complete sequence	4378888	574125	583321	4378888		Acinetobacter_phage(16.67%)	7	NA	NA
WP_095417413.1|574125_575724_+	polynucleotide adenylyltransferase PcnB	NA	A0A172Q0J1	Acinetobacter_phage	30.6	2.6e-16
WP_095417414.1|575772_576321_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_095417415.1|576317_576998_+	deoxynucleoside kinase	NA	A0A249XZR7	Enterococcus_phage	28.1	5.7e-05
WP_095417416.1|577035_577851_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	29.6	4.1e-34
WP_095417417.1|577997_579920_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	36.6	2.5e-50
WP_007179199.1|579945_581088_-	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	40.2	3.6e-28
WP_095417418.1|581359_583321_-	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	49.1	3.9e-147
>prophage 3
NZ_CP022989	Paraburkholderia aromaticivorans strain BN5 chromosome 1, complete sequence	4378888	1082558	1149260	4378888	plate,tRNA,protease,integrase,transposase	Streptococcus_phage(16.67%)	60	1115761:1115805	1127574:1127618
WP_095417748.1|1082558_1084046_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_095417749.1|1084239_1084539_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_157763715.1|1084537_1084687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004189550.1|1084919_1085963_+	rod shape-determining protein	NA	NA	NA	NA	NA
WP_095417750.1|1086116_1087259_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_095417751.1|1087255_1087768_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_095417752.1|1087909_1090219_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_095417753.1|1090230_1091379_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_095417754.1|1091468_1092170_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_095417755.1|1092166_1092949_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_167397516.1|1093194_1093641_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_095417756.1|1093647_1094280_-	7-carboxy-7-deazaguanine synthase	NA	R4TAH8	Halovirus	34.2	3.3e-07
WP_095417757.1|1094377_1095109_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A1B0Z0B4	Vibrio_phage	45.6	7.3e-51
WP_095417758.1|1095701_1096391_-	response regulator	NA	NA	NA	NA	NA
WP_095417759.1|1096391_1098806_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_095417760.1|1098795_1099395_-	DUF4390 domain-containing protein	NA	NA	NA	NA	NA
WP_095417761.1|1099391_1100831_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_095417762.1|1101153_1102011_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_095417763.1|1102115_1102757_-	LysE family translocator	NA	NA	NA	NA	NA
WP_095417764.1|1102869_1103856_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	38.9	2.3e-07
WP_095417765.1|1103887_1104391_-	peptide deformylase	NA	A0A0E3FIY1	Synechococcus_phage	35.8	1.4e-13
WP_095417766.1|1104635_1105901_+	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	36.2	9.2e-25
WP_095417767.1|1105990_1106368_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_095417768.1|1106615_1109288_+	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	24.6	1.9e-19
WP_095417769.1|1109439_1110543_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095417770.1|1110882_1112739_-	phosphoenolpyruvate carboxykinase (GTP)	NA	NA	NA	NA	NA
WP_095417771.1|1113119_1114133_+	D-2-hydroxyacid dehydrogenase family protein	NA	M1HBE3	Paramecium_bursaria_Chlorella_virus	24.8	1.6e-11
WP_095417772.1|1114205_1115084_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_011486433.1|1115120_1115525_-	PaaI family thioesterase	NA	NA	NA	NA	NA
1115761:1115805	attL	CTCTTAATCCGTAGGTCGAGTGTTCGAGTCACTCACGCCCCACCA	NA	NA	NA	NA
WP_095417773.1|1115860_1116871_-|integrase	site-specific integrase	integrase	A0A1S5NNJ1	Burkholderia_phage	46.0	9.7e-78
WP_095417774.1|1116768_1117071_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_095417775.1|1117074_1119675_-	conjugative relaxase	NA	NA	NA	NA	NA
WP_157763716.1|1119668_1120907_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_095417777.1|1120911_1121238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417778.1|1121237_1121555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157763717.1|1121863_1122538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157763718.1|1122861_1123056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417781.1|1123268_1124084_+	TIGR04255 family protein	NA	NA	NA	NA	NA
WP_095417782.1|1124085_1124769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417783.1|1124938_1125658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417784.1|1125797_1126979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417785.1|1127782_1128229_+	hypothetical protein	NA	A0A2D1GMX8	Marinobacter_phage	48.9	9.8e-06
1127574:1127618	attR	CTCTTAATCCGTAGGTCGAGTGTTCGAGTCACTCACGCCCCACCA	NA	NA	NA	NA
WP_095417786.1|1128216_1128570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417787.1|1129193_1130258_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_095417788.1|1130254_1131346_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_095417789.1|1131345_1133238_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_095417790.1|1133269_1133818_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_095417791.1|1134220_1134508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417792.1|1134513_1136376_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417793.1|1136500_1137088_+	LysE family translocator	NA	NA	NA	NA	NA
WP_095417794.1|1137108_1137954_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_095417795.1|1138083_1138878_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095417796.1|1138999_1140154_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_095417797.1|1140464_1141868_-	ATP-dependent RNA helicase DbpA	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	30.3	2.3e-45
WP_095417798.1|1141991_1142192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417799.1|1142292_1142724_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_095417801.1|1143073_1145173_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	44.3	3.8e-132
WP_095417802.1|1145235_1146291_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_095417045.1|1147594_1148014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417046.1|1148012_1149260_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	21.0	3.3e-11
>prophage 4
NZ_CP022989	Paraburkholderia aromaticivorans strain BN5 chromosome 1, complete sequence	4378888	1982131	1991887	4378888	protease	Streptococcus_phage(16.67%)	8	NA	NA
WP_095418411.1|1982131_1984237_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.2	9.2e-62
WP_095418412.1|1984679_1985186_-	DUF192 domain-containing protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	39.2	9.4e-13
WP_095418413.1|1985331_1985535_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095418414.1|1985988_1986558_-	pseudouridine synthase	NA	NA	NA	NA	NA
WP_095418415.1|1986892_1988149_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	2.3e-12
WP_007180614.1|1988521_1988728_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	81.8	2.4e-23
WP_006050100.1|1989278_1989593_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	44.6	5.8e-13
WP_011489636.1|1989589_1991887_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.6	7.2e-169
>prophage 5
NZ_CP022989	Paraburkholderia aromaticivorans strain BN5 chromosome 1, complete sequence	4378888	4293866	4313143	4378888	plate,transposase,integrase	Pseudomonas_phage(22.22%)	22	4284041:4284057	4311688:4311704
4284041:4284057	attL	CGATCGCGCGCGGCGAC	NA	NA	NA	NA
WP_095420068.1|4293866_4295066_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	43.3	1.1e-83
WP_095420069.1|4295590_4296721_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_167397546.1|4297056_4298043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095420071.1|4298172_4298526_+	DUF2591 family protein	NA	NA	NA	NA	NA
WP_157763775.1|4298494_4299670_-	acyltransferase family protein	NA	B5WZU0	Pseudomonas_phage	31.4	2.5e-24
WP_095420439.1|4300375_4300552_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_095420074.1|4300609_4301026_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PH90	Moraxella_phage	59.7	5.3e-38
WP_095420075.1|4301099_4301624_-	DUF1353 domain-containing protein	NA	A0A1L2CVI8	Pectobacterium_phage	47.4	5.3e-19
WP_095420076.1|4302023_4302242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095420077.1|4302250_4302736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095420078.1|4302792_4303365_-	chitinase	NA	A0A059VA40	Pseudomonas_phage	45.5	3.7e-34
WP_157763776.1|4303361_4303691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095417514.1|4303817_4305218_-|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_095417314.1|4305791_4306602_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_095420080.1|4306761_4307853_+	acyltransferase	NA	NA	NA	NA	NA
WP_095420081.1|4308029_4308335_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_095420082.1|4308388_4309102_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_095420084.1|4309300_4310263_-	hypothetical protein	NA	A9YX14	Burkholderia_phage	34.7	3.7e-26
WP_095420085.1|4310271_4310874_-	DUF2313 domain-containing protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	34.9	1.0e-26
WP_095420086.1|4310874_4312032_-|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	32.6	1.7e-30
4311688:4311704	attR	GTCGCCGCGCGCGATCG	NA	NA	NA	NA
WP_095420087.1|4312033_4312477_-	phage GP46 family protein	NA	A0A2P9JZK5	Alteromonadaceae_phage	37.9	2.8e-21
WP_095420440.1|4312534_4313143_-|plate	phage baseplate assembly protein	plate	NA	NA	NA	NA
>prophage 6
NZ_CP022989	Paraburkholderia aromaticivorans strain BN5 chromosome 1, complete sequence	4378888	4317758	4328696	4378888	terminase,capsid,head,portal,tail	Pseudomonas_phage(20.0%)	14	NA	NA
WP_095420091.1|4317758_4318103_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_095420092.1|4318106_4318484_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_095420093.1|4318546_4320031_-|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	42.3	4.3e-90
WP_095420094.1|4320027_4320207_-	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_095420095.1|4320216_4320789_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_095420096.1|4320785_4321118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095420097.1|4321118_4321400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095420098.1|4321399_4322458_-|capsid	major capsid protein	capsid	V5Q8G6	Xylella_phage	31.4	2.7e-46
WP_095420099.1|4322535_4323222_-|head	head decoration protein	head	NA	NA	NA	NA
WP_095420100.1|4323251_4323893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095420101.1|4323917_4324805_-	S49 family peptidase	NA	A0A1I9KF73	Aeromonas_phage	39.0	4.7e-52
WP_095420441.1|4324801_4326367_-|portal	phage portal protein	portal	A0A291AUL8	Sinorhizobium_phage	35.3	1.2e-90
WP_095420442.1|4326435_4326666_-|head,tail	phage head-tail adapter protein	head,tail	NA	NA	NA	NA
WP_095420443.1|4326713_4328696_-|terminase	phage terminase large subunit family protein	terminase	G8EXZ6	Synechococcus_phage	44.9	3.5e-140
>prophage 1
NZ_CP022990	Paraburkholderia aromaticivorans strain BN5 chromosome 2, complete sequence	2992211	361813	427033	2992211	holin,transposase,tRNA	Catovirus(28.57%)	53	NA	NA
WP_095420710.1|361813_363202_+|tRNA	cysteine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_095420711.1|363300_363549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095418279.1|363812_365228_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_095420712.1|365492_365885_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_095420713.1|365894_366587_-	HAD family phosphatase	NA	NA	NA	NA	NA
WP_095420714.1|366693_368136_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_095420715.1|368339_370124_-	alkaline phosphatase family protein	NA	NA	NA	NA	NA
WP_157763796.1|370198_370525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095422728.1|370521_370842_+	BcpO-related WXXGXW repeat protein	NA	NA	NA	NA	NA
WP_095420716.1|371200_371761_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_095420717.1|371757_372183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095420718.1|372179_372698_+	periplasmic heavy metal sensor	NA	NA	NA	NA	NA
WP_095420719.1|372777_374352_+	DUF1800 domain-containing protein	NA	NA	NA	NA	NA
WP_095422729.1|374357_375506_+	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_095420720.1|375686_376046_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_095420721.1|378405_379179_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_095420722.1|379267_380950_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.0	8.8e-15
WP_167397595.1|381153_381441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095420724.1|381958_383089_+	rubrerythrin family protein	NA	NA	NA	NA	NA
WP_095420725.1|383480_384659_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.9	5.3e-27
WP_095420726.1|384651_385554_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_095420727.1|385561_386563_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_095420728.1|386663_387599_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_095420729.1|387919_389182_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_157763797.1|390196_390619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095422730.1|390740_391823_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_095420731.1|392106_393501_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_095420732.1|393544_394789_+	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA	NA
WP_095420733.1|394810_395149_+	sarcosine oxidase subunit delta	NA	NA	NA	NA	NA
WP_095420734.1|395145_398148_+	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA	NA
WP_095420735.1|398137_398794_+	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
WP_095420736.1|398850_399114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095420737.1|399256_400675_+	MFS transporter	NA	NA	NA	NA	NA
WP_095420738.1|400718_401891_-	class C beta-lactamase	NA	NA	NA	NA	NA
WP_095420739.1|402013_403699_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	29.3	1.5e-51
WP_095420740.1|403710_405180_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_095420741.1|405222_405810_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_095420742.1|406100_407300_+	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	27.2	1.3e-12
WP_095420743.1|408341_409337_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_095420744.1|409780_411055_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	55.1	4.8e-106
WP_012426939.1|411073_412045_+	membrane dipeptidase	NA	NA	NA	NA	NA
WP_095420745.1|412094_412631_+	4-vinyl reductase	NA	NA	NA	NA	NA
WP_095420746.1|412716_414780_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_095420747.1|414782_416696_+	(Fe-S)-binding protein	NA	NA	NA	NA	NA
WP_095420748.1|416700_417870_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_095420749.1|417866_418643_+	drug:proton antiporter	NA	NA	NA	NA	NA
WP_095420750.1|418716_420030_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_095420751.1|420063_421323_+	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_095420752.1|421461_422319_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095420753.1|422402_423278_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_095420754.1|423417_424332_-	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	35.0	1.6e-34
WP_095420755.1|424495_426034_+|holin	choline-sulfatase	holin	A0A2P0VMN7	Tetraselmis_virus	31.7	6.1e-07
WP_095420756.1|426082_427033_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
>prophage 1
NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	664981	568999	608091	664981	plate,integrase,transposase	Leptospira_phage(11.11%)	33	568952:568966	590491:590505
568952:568966	attL	GGTCTCTACGGCAGT	NA	NA	NA	NA
WP_095423325.1|568999_570087_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	36.8	6.0e-41
WP_095423326.1|570439_572647_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_095423327.1|572649_573111_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	30.9	5.2e-10
WP_095423328.1|573296_574241_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_157763856.1|574456_574642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423329.1|575421_575691_-	DUF1488 family protein	NA	NA	NA	NA	NA
WP_095423330.1|575829_576198_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423331.1|576635_577640_-	phospholipase	NA	NA	NA	NA	NA
WP_095423332.1|579595_580087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423434.1|580124_580601_-	CreA family protein	NA	NA	NA	NA	NA
WP_095423334.1|581385_583890_+	cation-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	27.7	1.9e-61
WP_095423335.1|583926_584547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167397612.1|588246_588393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423336.1|588463_589654_-	acetylornithine deacetylase	NA	NA	NA	NA	NA
WP_157763857.1|589675_590422_-	MFS transporter	NA	NA	NA	NA	NA
WP_157763858.1|590445_590907_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	48.0	1.1e-33
590491:590505	attR	ACTGCCGTAGAGACC	NA	NA	NA	NA
WP_095423339.1|591070_592306_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	D2TEZ5	Emiliania_huxleyi_virus	26.7	2.4e-25
WP_095423340.1|592250_593198_-	branched-chain amino acid transferase	NA	NA	NA	NA	NA
WP_095423341.1|593194_593752_-	peptide deformylase	NA	K4JRM9	Caulobacter_phage	33.1	9.6e-11
WP_095423435.1|593748_594879_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095423342.1|595002_595479_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_095423436.1|595543_596275_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	30.3	1.3e-20
WP_095423343.1|596865_597627_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	39.7	8.5e-34
WP_095423344.1|597681_598227_+	DUF3455 domain-containing protein	NA	NA	NA	NA	NA
WP_095423345.1|598296_599721_-	serine/threonine protein kinase	NA	A0A1B1IUU3	uncultured_Mediterranean_phage	28.2	4.2e-18
WP_095423346.1|599717_600638_-	DUF3365 domain-containing protein	NA	NA	NA	NA	NA
WP_095423437.1|600634_601546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423348.1|601917_602439_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_095423438.1|602447_603950_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_095423349.1|604032_604536_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_095423350.1|604670_605183_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_095423351.1|605188_607087_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_095423352.1|607050_608091_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 1
NZ_CP022992	Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence	489416	126423	191634	489416	transposase,integrase	Acidithiobacillus_phage(22.22%)	51	137094:137153	174586:176503
WP_095423523.1|126423_127596_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423524.1|127797_127998_-	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
WP_095423525.1|128001_129297_-	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA	NA
WP_028206235.1|129306_129579_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA	NA
WP_095423526.1|129929_131471_-	carbohydrate porin	NA	NA	NA	NA	NA
WP_095423528.1|133200_134862_+	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_095423529.1|135138_136086_+	cation transporter	NA	NA	NA	NA	NA
WP_095211915.1|136624_136828_-	hypothetical protein	NA	NA	NA	NA	NA
137094:137153	attL	CTCGAGAGTGCCGACTTCTCGCTTGTTTTTTCTCGGACTCGCTCCGGCCTCGGCGCTTTT	NA	NA	NA	NA
WP_095417514.1|137574_138975_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_095423530.1|140325_140535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423531.1|140742_142185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423532.1|142181_143171_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_095423533.1|143175_145149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423534.1|145145_145799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157763876.1|146191_147460_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423536.1|147658_148129_+	DUF2844 domain-containing protein	NA	NA	NA	NA	NA
WP_095423537.1|148140_149400_+	DUF3443 family protein	NA	NA	NA	NA	NA
WP_095423538.1|149604_151215_-	replication initiation protein	NA	NA	NA	NA	NA
WP_095423539.1|151817_152342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423540.1|152856_153141_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423542.1|153424_154462_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_095423543.1|154468_155134_-	ParA family protein	NA	E5FFJ3	Burkholderia_phage	26.8	4.0e-11
WP_095423784.1|156101_157439_-	replication initiation protein	NA	NA	NA	NA	NA
WP_095423544.1|158501_158705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423545.1|158840_159419_+	YcbK family protein	NA	A0A2K9VAY0	Citrobacter_phage	47.1	8.2e-05
WP_095423546.1|159430_160333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423547.1|160457_160859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423548.1|160860_161610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423549.1|161675_162968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157763877.1|163268_163886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423551.1|163882_164572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423552.1|165958_166357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423553.1|166399_168241_-	ATP-dependent helicase	NA	S5MMD7	Bacillus_phage	23.9	2.9e-19
WP_095423554.1|168244_168988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423555.1|169663_169927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423556.1|169923_170547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423557.1|170605_171721_+	AAA domain-containing protein	NA	A0A142EZN6	Stenotrophomonas_phage	29.2	3.6e-09
WP_167397614.1|171723_172329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423558.1|172339_173368_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423559.1|173384_173858_+	single-stranded DNA-binding protein	NA	A0A1X9SGJ7	Bradyrhizobium_phage	36.1	3.7e-11
WP_095423786.1|173970_174198_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095417514.1|175066_176467_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_006400877.1|178924_179674_-	ATP-binding protein	NA	K4HZD4	Acidithiobacillus_phage	61.2	1.8e-81
174586:176503	attR	CTCGAGAGTGCCGACTTCTCGCTTGTTTTTTCTCGGACTCGCTCCGGCCTCGGCGCTTTTCATCTGAACACCGATCCATTTCCTGGTGATGTGATCCGGCGTGGCCGGTTGCCTTCGTGCACCAGATTCATCGTCAGGCGGCAGTGATCAAACTCACGTTGCTCTATTCCTCAATCAATGCCTTGTTGATGCTCTCGTAGTTGACTTGCAGGGGCTCACATCGCTCAGCGCATCGCCCACGAAGGACTCAGTGCGGATCTTCCTGTCCCGCGTATCGCTCGTCTGTCAGTATGCCCCGAACTGGTTCGGGAGGGCCTTGCAATGGGGGGGGGGTGAGTGACCCCGCGCGTCTTTCATCTATCGCGGCGAGCATCGCCTTGATCGTCTCAATGAGTCTTTCGATTTGAAGGAGCCGTTTGTGCTGCCTATATTGCATATTCTATGCGATACTTCGTAGTGCAAAATAATGTAGAGAACAACAATGAAACTCTGGACGGCTTGGTGGGACGCGATCTGGCTGCTACGCCCAGCGTTTTCTCGCCTGCGCAGCTTCATGTGGTTCGCAACTGTCGTCGCTGGCTTGACTGTGCGCACCGAGTTGCTGGGCGTGACCAGCATCGTGCGGGCTCTCAAACTGCGGCCAGCCCTGTACAACAAGCTGCGTGACAGCCTGCATAGCGACGCCGTGCAGCTCGATCAGCTTTCAGCGCTGTGGACCCAGACGGTGCTGCGCCTGTTCCCTGACCCGCTACGCGTCAATGGCCGACTGGTTTTGGTCGGCGATGGCATCAAGGTGGCCAAGAGCGGCAGGAAGATGCCCGGCGTCAAGCTGCTGCATCAACAGTCCGACTCCAACACCAAGCCCGAATACATCATGGGGCACTCGATGCAGGCGGTCAGTATGCTTGTGCGGGCCGCCCAGAGCGTCTTCGCCGTACCGCTGGCCGTGCGTATTCACGAAGGTCTGGTGTGGTCCAACCGCGATCGGCGTACCTTGCTCGACAAGATGATCTCGCTGCTTGGCATCGTCTCGGTGCAGCAGCCGTTCTACTTCGTGGCCGATGCCTACTACGCTGCTGGCAAGATCGTCAAAGGCCTGCGCGATCGGGACAACCACCTGGTCACACGCGTGAAGTCCAATGCAGTCGCCTGTGCCCCGTACGTGCAGCAGGGACCGCGCAAACGGGGGCGTCCCAGGCGCTACGGTGAGAAGATCAAACTCAAATCGCTACTGGCTGATCCCCAGGCCTTGCAATCCGCCCCCAGTCCGGTCTATGGCGAGCACAATGTCACCATTCACTATCGGGTCTGCGATCTGCTGTGGCCGGCGTACGGTCAGCTGGTTCGCTTCGTGGCAGTGACTCACCCAAGCAGGGGTTCGTGTCTGCTGATGTGCACCGACCTCAGTCTGGATGCCGTCGAGATCATCCGCCTGTATGGATTGCGCTTCAAGATCGAGTACAGCTTCAAACAGGCGGTGCATCGGATCGGCACATTCGCGTACCACTTCTGGATGCAGGACATGAAGCCGCTCGCCCGCCGAAACGGCGATCAATACCTTCATCGCGAGTCACTCGAGTACCGCAACGCCGTCAAGCGCAAGATCCACGCGTACCACGTCTTTATGCACGCTGGCATCGTCTGTCAGGGACTGCTTCACTATCTGGCAGCGGTGTTCCCTTCACAGGTCTGGAGTTCCTTTGGATCCTGGCTGCGCACTATCCGCCCCGGCATCCCTCCATCGGAGTTGGTCGTCGCCAACGCACTACGTCAATGCCTGCCCGAATTTCTCGTGAATAGCGCCAAAACCCATTTCTTCGCAAAATTCATCGCAGAAAGGCAGGACCCCGACACATTCGAGATGTTCCGCCTGGGCACATAGCCGAAAAACCACGCCTGAATTCGGCACTCTCGAGTT	NA	NA	NA	NA
WP_095423560.1|179689_181240_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.0	1.5e-157
WP_095423561.1|182147_183221_+	ribonucleotide-diphosphate reductase subunit beta	NA	K4K678	Caulobacter_phage	29.7	1.5e-36
WP_095423562.1|183307_183742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423563.1|184164_185493_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423564.1|185705_186806_+	DUF3150 domain-containing protein	NA	NA	NA	NA	NA
WP_095423565.1|186864_189054_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_095418116.1|189325_190144_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	35.5	9.4e-31
WP_095418115.1|190140_191634_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP022992	Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence	489416	236439	258383	489416	transposase,integrase	uncultured_virus(100.0%)	16	232776:232790	262001:262015
232776:232790	attL	GAGCGTGAGATGCGC	NA	NA	NA	NA
WP_095423477.1|236439_237257_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_095423600.1|238121_239150_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_095423601.1|239910_240282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423602.1|240648_241782_-	TDT family transporter	NA	NA	NA	NA	NA
WP_095423603.1|241889_242786_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095423605.1|243357_243792_-	cytochrome c	NA	NA	NA	NA	NA
WP_095423606.1|243807_245049_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_095423607.1|245062_247354_-	cation-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	28.3	5.3e-55
WP_095423608.1|247372_247960_-	cytochrome c	NA	NA	NA	NA	NA
WP_095423609.1|247956_248553_-	cytochrome-c oxidase	NA	NA	NA	NA	NA
WP_095423610.1|248555_250220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423600.1|251400_252429_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_167397613.1|254744_255023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423792.1|255152_256055_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423611.1|256051_257392_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423612.1|257378_258383_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
262001:262015	attR	GAGCGTGAGATGCGC	NA	NA	NA	NA
>prophage 1
NZ_CP022993	Paraburkholderia aromaticivorans strain BN5 plasmid pBN3, complete sequence	162757	3098	63973	162757	integrase,transposase	Leptospira_phage(19.05%)	50	10522:10581	51010:52127
WP_095423817.1|3098_4094_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	25.2	8.3e-21
WP_095423818.1|4426_4720_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423819.1|4754_5216_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_095423820.1|5196_5544_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	43.5	1.0e-18
WP_095423821.1|5628_7233_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	38.2	6.1e-74
WP_095423822.1|7264_8062_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1P8DJ76	Virus_Rctr85	26.9	4.9e-08
WP_095423823.1|8058_8967_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B1P7C7	Bacillus_phage	26.5	2.8e-07
WP_095423824.1|8936_10208_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A142K7N4	Mycobacterium_phage	27.9	1.6e-13
10522:10581	attL	GGGCTTTGTTCGGATGGGGGGTATTGCAAAGTGGCCGCAGTTTGTGTAAAAGCGCAACAT	NA	NA	NA	NA
WP_095423817.1|10600_11596_+|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	25.2	8.3e-21
WP_095423825.1|11582_12059_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_157763860.1|13818_14349_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423507.1|14485_17491_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_011875611.1|17477_17825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011875610.1|17821_19027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423363.1|19132_20824_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2K9VH72	Gordonia_phage	23.7	1.4e-07
WP_095423826.1|20904_22056_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_095423827.1|22064_22943_-|integrase	site-specific integrase	integrase	S5W9T9	Leptospira_phage	31.4	2.4e-32
WP_095423828.1|23555_24893_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.9	1.0e-37
WP_095423829.1|25017_26262_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423926.1|26258_27218_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423830.1|27210_28215_+|integrase	site-specific integrase	integrase	A0A1P8DJ76	Virus_Rctr85	24.2	6.4e-05
WP_095423828.1|28397_29735_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.9	1.0e-37
WP_095423827.1|30347_31226_+|integrase	site-specific integrase	integrase	S5W9T9	Leptospira_phage	31.4	2.4e-32
WP_095423831.1|31234_32440_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_095423832.1|32751_33360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423833.1|33486_34641_-	porin	NA	NA	NA	NA	NA
WP_095423834.1|34704_35724_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_157763909.1|36106_36730_-	FCD domain-containing protein	NA	NA	NA	NA	NA
WP_095423836.1|36947_38294_-|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	46.8	1.1e-105
WP_095423837.1|38344_39043_-	hypothetical protein	NA	A0A0U4J920	Pseudomonas_phage	61.5	2.6e-74
WP_095423838.1|39590_40841_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.4	5.5e-30
WP_095423839.1|41826_43107_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_095423840.1|43147_44365_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095423841.1|44370_45240_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_095423842.1|45236_46127_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_095423843.1|46126_46888_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.4	7.7e-11
WP_095423844.1|46884_47643_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	26.9	5.3e-12
WP_157763910.1|47804_48227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167397620.1|48244_49282_+	EamA family transporter	NA	NA	NA	NA	NA
WP_095423847.1|49278_49821_+	flavin reductase	NA	NA	NA	NA	NA
WP_095423817.1|49994_50990_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	25.2	8.3e-21
WP_095423848.1|50988_51999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423849.1|52066_52327_+	hypothetical protein	NA	NA	NA	NA	NA
51010:52127	attR	ATGTTGCGCTTTTACACAAACTGCGGCCACTTTGCAATACCCCCCATCCGAACAAAGCCCTTCTTCGCGCCTTCGTGGCGCACGGTCATCAGCATATTGTCCAGCCTGACGCAATTGCACGACGCCGTACACGTCGATACCTTTTTGTCAGCGATTTCCGCCAAAGGGCTTTATCACGACAGCGAGAATGAAGCGTTGACACGTGCGTTCGGGCTTCTTGCGCCAGCGCGCACGGCTGAACTCATGGAGCAGATTATCTCTGCGAACGCGCAGATGATGCCGGGCGCCTGCGCCGGCCTGCTGGCCCGGACCAGTGAAGGTACTCCGCCCGCCTGTCCCCCGGCGCTCCTTCACCCGGTTGCCACGTCGCTGGTCGAAACGCTTCTGGGACAACGCTCGAGCGCTTCCCGCCCTGATTGCCTGCGACGGCCAGACCCAATCAAACCCACCCTGATTGTCGGCCTGCTGACAGCTCTTGACCGGATTGACTCGCCATTACTCGCCGACCGTGTTGTCGAACACGTGTTGGGAAACCCGGCCTCTTTCGGCATGGACGCCATCATCGTTCCTGCCGTCCTGGGTTTGACTGAATGGGCGCCGACGTTGAGTGTCGCGTCGGTCCAGCGCCTGCGTGCCGCATGCCTGGCCCATCTGCACGGTCGTATCGCCGAGCCCCTGGAACCACCAGCCGATTTCGCGCGTGTGAATACCGTCAGTTGCCGCTGCGTCCATTGCGCTGAGCTCGGCCGGTTTCTGGTCGATCCCGGGCGCAAGGAATGGGCGTTAAAGGCGGCCCAGCACTCCCGCAGTCACGTCGAGAGTGCCATCAGGCAGACCGGTTGCGATCTGGACTGTGCGACGCGCAGGGTCGGTAGTCCTCACAGCCTGATATGCACAAAAAATCAGGCGAGCTATGAACGGCGTGTGCGACAACGCAAGGACGATCTGCGAAACGCGGAGCGGCTTGATGTCCTTTCGGAACACGGATGACAAGTCGGCGATGTATTGGCCCAGGCGGGTGACGAGGCCATGAGAACTGGCATTTGAGGGAAGTGCGATGGATATCGATACCGGGGCAGTCGACGAAGTGGTCCTGGCTCTGCTTTACCTGAATCTAT	NA	NA	NA	NA
WP_095423927.1|53478_55917_+	DEAD/DEAH box helicase family protein	NA	A0A2K9R7J3	Dishui_lake_phycodnavirus	30.6	9.0e-37
WP_095423850.1|56100_57093_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_095423851.1|57448_58777_-	4-hydroxybutyrate CoA-transferase	NA	NA	NA	NA	NA
WP_095423852.1|59078_59855_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_095423853.1|59957_61616_-	cyclohexanecarboxylate-CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	26.8	1.7e-31
WP_095423854.1|61650_62802_-	cyclohexanecarboxyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_095423834.1|62953_63973_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP022993	Paraburkholderia aromaticivorans strain BN5 plasmid pBN3, complete sequence	162757	72721	147590	162757	integrase,transposase	Ralstonia_virus(15.38%)	56	125674:125688	147601:147615
WP_095417046.1|72721_73969_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	29.3	1.6e-42
WP_095417045.1|73967_74387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423862.1|75581_76169_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_095423863.1|76194_77568_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_095423864.1|77869_79354_-	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_095423865.1|79343_80792_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_157763911.1|80803_81199_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_095423867.1|81195_82563_-	FAD-binding protein	NA	NA	NA	NA	NA
WP_095423817.1|82576_83572_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	25.2	8.3e-21
WP_095417514.1|84211_85612_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_095423817.1|86403_87399_+|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	25.2	8.3e-21
WP_095423868.1|88393_89584_-	porin	NA	NA	NA	NA	NA
WP_095417030.1|89845_90802_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_095423869.1|92933_94085_-	CoA transferase	NA	NA	NA	NA	NA
WP_095423870.1|94170_94818_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095423928.1|96217_96445_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_095423871.1|96526_96808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423872.1|96868_97267_-	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA	NA
WP_157763913.1|97229_97748_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_095423874.1|97744_99325_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	23.2	7.7e-21
WP_095423875.1|99364_99739_-	OB-fold domain-containing protein	NA	NA	NA	NA	NA
WP_095423876.1|99754_100930_-	thiolase family protein	NA	NA	NA	NA	NA
WP_095423877.1|102286_102829_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423878.1|102893_104216_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_095423828.1|104989_106327_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.9	1.0e-37
WP_095423828.1|106848_108186_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.9	1.0e-37
WP_095423827.1|108798_109677_+|integrase	site-specific integrase	integrase	S5W9T9	Leptospira_phage	31.4	2.4e-32
WP_095423831.1|109685_110891_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_095423879.1|111141_111522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157763914.1|112839_113298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423881.1|115496_116945_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_095423882.1|116941_118822_+|integrase	integrase	integrase	A0A2H4J9J6	uncultured_Caudovirales_phage	27.3	7.7e-20
WP_095423883.1|118818_120702_+|integrase	integrase	integrase	A0A2H4J185	uncultured_Caudovirales_phage	26.7	2.2e-38
WP_095423884.1|120698_121061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423885.1|122084_122726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423929.1|123476_125408_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
125674:125688	attL	TTCAGTATATAAGGT	NA	NA	NA	NA
WP_095423886.1|125687_126260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157763915.1|126323_127499_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_095423889.1|128195_129299_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA	NA
WP_157763916.1|129291_130377_-	AAA family ATPase	NA	A0A1X9I765	Streptococcus_phage	27.4	4.6e-09
WP_095423891.1|130976_131678_+	type IV secretion system protein	NA	NA	NA	NA	NA
WP_095423892.1|131674_132550_+	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA	NA
WP_095423893.1|132558_133851_+	TrbI/VirB10 family protein	NA	NA	NA	NA	NA
WP_095423930.1|133843_134650_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_095423894.1|134646_135954_+	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA	NA
WP_095423895.1|135950_136385_+	lytic transglycosylase domain-containing protein	NA	A0A0K2QQJ4	Ralstonia_phage	32.5	5.9e-08
WP_095423896.1|136381_136966_+	pilus assembly protein	NA	NA	NA	NA	NA
WP_095423897.1|136968_138579_+	type II secretory pathway protein	NA	NA	NA	NA	NA
WP_095423898.1|138587_139916_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423899.1|139902_140670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423900.1|140686_142813_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA	NA
WP_095417046.1|142818_144066_-|transposase	ISL3 family transposase	transposase	A4PE56	Ralstonia_virus	29.3	1.6e-42
WP_095417045.1|144064_144484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423901.1|144490_145972_-	ATP-dependent helicase	NA	A0A126DN25	Acinetobacter_phage	33.1	2.7e-68
WP_095423902.1|146132_146600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423903.1|146672_147590_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
147601:147615	attR	ACCTTATATACTGAA	NA	NA	NA	NA
>prophage 1
NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	152437	30270	64313	152437	integrase,transposase	Gordonia_phage(12.5%)	28	20873:20887	64934:64948
20873:20887	attL	GCGCGCGCTCGCCGA	NA	NA	NA	NA
WP_007180429.1|30270_31962_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A2K9VH72	Gordonia_phage	23.4	4.0e-07
WP_007181927.1|32105_35132_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_156903410.1|35128_35491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007180432.1|35487_35751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_007180433.1|35827_36400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423935.1|36731_37730_-	formamidase	NA	NA	NA	NA	NA
WP_095423936.1|37995_39456_-	amidase	NA	NA	NA	NA	NA
WP_095423937.1|39504_40659_-	porin	NA	NA	NA	NA	NA
WP_095423938.1|40793_41810_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_095423939.1|41891_43220_-	cytosine permease	NA	NA	NA	NA	NA
WP_095423940.1|43647_44685_+	aliphatic amidase	NA	NA	NA	NA	NA
WP_095423941.1|44737_45547_+	CbbQ/NirQ/NorQ/GpvN family protein	NA	R4TG24	Halovirus	29.7	9.1e-10
WP_095423942.1|45552_47298_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_095423943.1|47355_48561_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_095423944.1|48577_49219_+	ANTAR domain-containing protein	NA	NA	NA	NA	NA
WP_095423945.1|49731_50082_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_095423946.1|50110_51349_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	57.5	1.5e-133
WP_095423947.1|51430_52120_-	urea ABC transporter ATP-binding subunit UrtE	NA	G9BWD6	Planktothrix_phage	32.5	8.5e-17
WP_095423948.1|52131_52875_-	urea ABC transporter ATP-binding protein UrtD	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	1.3e-15
WP_095423949.1|52871_54050_-	urea ABC transporter permease subunit UrtC	NA	NA	NA	NA	NA
WP_095423950.1|54135_55053_-	urea ABC transporter permease subunit UrtB	NA	NA	NA	NA	NA
WP_095423951.1|55115_56393_-	urea ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095423952.1|56579_60011_+	response regulator	NA	A0A1V0SGX0	Hokovirus	28.9	1.5e-32
WP_095423953.1|60003_60984_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_157763922.1|61182_61335_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_157763925.1|61480_62284_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	27.4	2.3e-13
WP_095423955.1|63045_63762_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	46.4	2.0e-45
WP_095423956.1|63776_64313_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
64934:64948	attR	GCGCGCGCTCGCCGA	NA	NA	NA	NA
>prophage 2
NZ_CP022994	Paraburkholderia aromaticivorans strain BN5 plasmid pBN4, complete sequence	152437	84316	115274	152437	integrase,transposase	Salmonella_phage(40.0%)	20	107046:107060	115527:115541
WP_095423975.1|84316_85678_+|transposase	IS110 family transposase	transposase	M1NSC9	Streptococcus_phage	19.9	2.6e-09
WP_095423997.1|85652_85907_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_095423976.1|85964_87139_-|transposase	IS3-like element ISBxe1 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	43.0	1.8e-62
WP_095423998.1|87384_87783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095423977.1|87874_88588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423978.1|88690_89599_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_095423979.1|89709_91518_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA	NA
WP_095423980.1|92343_93363_-	YecA family protein	NA	NA	NA	NA	NA
WP_095423982.1|94028_95708_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_095423983.1|95704_98686_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	27.1	2.9e-77
WP_095423985.1|99419_100352_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095423986.1|100711_101476_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095423987.1|101628_102492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095423988.1|102517_103972_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_095423989.1|103968_107100_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
107046:107060	attL	TCACGAGGGCGATCA	NA	NA	NA	NA
WP_095423999.1|107111_108260_-	efflux RND transporter periplasmic adaptor subunit	NA	S5VL44	Leptospira_phage	22.0	3.0e-06
WP_088176911.1|109100_109337_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060090756.1|109406_110060_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_095423990.1|110447_113414_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	69.5	0.0e+00
WP_046565383.1|113567_115274_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
115527:115541	attR	TCACGAGGGCGATCA	NA	NA	NA	NA
