The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022998	Rhizobium sp. 11515TR strain 10195 chromosome, complete genome	4003789	354671	374526	4003789	transposase,tail	Pseudomonas_phage(20.0%)	13	NA	NA
WP_095433215.1|354671_355890_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	53.0	1.2e-74
WP_095433216.1|356337_358677_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	85.3	1.0e-05
WP_158225400.1|359464_359914_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_095433219.1|359910_360267_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_095433220.1|360338_361871_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	40.4	1.0e-102
WP_095436090.1|361928_362816_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_095433221.1|363036_363492_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_146214366.1|363998_364289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158225401.1|364486_366160_-	flagellin	NA	NA	NA	NA	NA
WP_158225402.1|366893_372170_-	putative Ig domain-containing protein	NA	A0A142KBU8	Gordonia_phage	58.3	1.3e-11
WP_095433225.1|372884_373442_-|tail	tail fiber protein	tail	NA	NA	NA	NA
WP_095433226.1|373452_374001_-|tail	phage tail protein	tail	A0A2R3ZX78	Enterobacter_phage	43.9	9.8e-08
WP_095433227.1|374016_374526_-|tail	phage tail protein	tail	NA	NA	NA	NA
>prophage 2
NZ_CP022998	Rhizobium sp. 11515TR strain 10195 chromosome, complete genome	4003789	486303	496655	4003789	transposase	Escherichia_phage(37.5%)	10	NA	NA
WP_095433318.1|486303_487404_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.5	1.2e-28
WP_174718577.1|487538_488558_+	glycosyl transferase	NA	NA	NA	NA	NA
WP_095433319.1|488586_489384_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_095433320.1|489624_491214_-|transposase	IS66 family transposase	transposase	S5VTP8	Leptospira_phage	38.3	1.4e-25
WP_016557443.1|491267_491621_-	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	47.3	1.2e-19
WP_095433321.1|491601_492024_-|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	37.8	3.7e-07
WP_095433322.1|493111_493660_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	56.5	8.8e-49
WP_095433323.1|493715_494603_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	61.8	1.8e-99
WP_095433324.1|494688_495591_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.6	5.3e-27
WP_095433325.1|495587_496655_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.1	4.9e-88
>prophage 3
NZ_CP022998	Rhizobium sp. 11515TR strain 10195 chromosome, complete genome	4003789	2134161	2139511	4003789		Sinorhizobium_phage(16.67%)	12	NA	NA
WP_095436246.1|2134161_2134551_-	HNH endonuclease	NA	A0A076G6E7	Sinorhizobium_phage	76.0	2.1e-49
WP_095434582.1|2134547_2135303_-	DUF5131 family protein	NA	A0A240F4U9	Ochrobactrum_phage	72.5	3.7e-106
WP_095434583.1|2135304_2136441_-	hypothetical protein	NA	A0A0F6TJP0	Escherichia_coli_O157_typing_phage	34.5	7.2e-29
WP_095434584.1|2136437_2137496_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	A0A141GF09	Brucella_phage	30.4	4.8e-27
WP_095434585.1|2137528_2137738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095434586.1|2137734_2138091_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095434587.1|2138083_2138296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095434588.1|2138292_2138472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095434589.1|2138471_2138744_-	hypothetical protein	NA	A0A0U2BX35	Paracoccus_phage	42.4	3.7e-08
WP_095434590.1|2138809_2139004_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095434591.1|2139000_2139249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_146214379.1|2139289_2139511_-	hypothetical protein	NA	W6E8N4	Rhizobium_phage	63.9	5.5e-18
>prophage 4
NZ_CP022998	Rhizobium sp. 11515TR strain 10195 chromosome, complete genome	4003789	2158713	2187561	4003789	capsid,plate	Burkholderia_phage(22.73%)	33	NA	NA
WP_095434618.1|2158713_2160216_+	DUF1073 domain-containing protein	NA	A0A0U5AT52	Pseudomonas_phage	51.5	1.3e-121
WP_158225421.1|2160202_2161030_+|capsid	minor capsid protein	capsid	Q6IWU3	Burkholderia_phage	34.8	6.4e-35
WP_095434620.1|2161019_2161520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095434621.1|2161549_2161735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095434622.1|2161809_2163525_+	DUF2213 domain-containing protein	NA	Q6IWU4	Burkholderia_phage	40.9	1.3e-74
WP_095434623.1|2163540_2164269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095434624.1|2164283_2165423_+	DUF2184 domain-containing protein	NA	Q6IWU6	Burkholderia_phage	49.0	2.8e-89
WP_095434625.1|2165529_2165919_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095434626.1|2165925_2166348_+	DUF4054 domain-containing protein	NA	A0A0F6WDD5	Pseudomonas_phage	40.4	2.0e-16
WP_095436251.1|2166389_2166902_+	hypothetical protein	NA	Q6IWU9	Burkholderia_phage	33.1	1.2e-15
WP_095434627.1|2166898_2167276_+	hypothetical protein	NA	H9C0W3	Aeromonas_phage	50.0	7.7e-28
WP_095434628.1|2167282_2168014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095434629.1|2168048_2170010_+	DUF3383 domain-containing protein	NA	Q6UKE8	Burkholderia_virus	30.6	2.7e-60
WP_095434630.1|2170033_2170465_+	hypothetical protein	NA	Q2NPD1	Xanthomonas_phage	39.0	5.7e-19
WP_158225434.1|2172187_2173357_+	hypothetical protein	NA	A0A0S2MWG1	Cellulophaga_phage	37.1	4.4e-05
WP_095434632.1|2173356_2173998_+	hypothetical protein	NA	K4IBX5	Acinetobacter_phage	31.8	1.5e-15
WP_095434633.1|2174003_2174306_+	hypothetical protein	NA	A0A077K9U4	Edwardsiella_phage	39.4	3.0e-14
WP_095434634.1|2174312_2174735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_146214383.1|2174771_2175632_+	MBL fold metallo-hydrolase	NA	A0A068CDF8	Acinetobacter_phage	29.7	3.3e-26
WP_095434636.1|2175633_2176293_+|plate	baseplate assembly protein	plate	NA	NA	NA	NA
WP_095434637.1|2176294_2176645_+	hypothetical protein	NA	A0A068CCM1	Acinetobacter_phage	43.5	6.2e-16
WP_095434638.1|2176657_2178091_+|plate	baseplate J/gp47 family protein	plate	E2GM17	Acinetobacter_phage	32.2	2.5e-42
WP_095434639.1|2178090_2178834_+	DUF2612 domain-containing protein	NA	H9C0Y0	Aeromonas_phage	41.7	1.6e-29
WP_095434640.1|2178852_2179851_+	hypothetical protein	NA	H9C0Y2	Aeromonas_phage	31.6	4.7e-16
WP_146214384.1|2179852_2181535_+	hypothetical protein	NA	A0A0U1ZHH3	Ralstonia_phage	40.0	6.3e-05
WP_158225422.1|2181652_2182720_+	acyltransferase family protein	NA	NA	NA	NA	NA
WP_095434643.1|2182787_2184059_+	hypothetical protein	NA	A0A1B1IR31	uncultured_Mediterranean_phage	38.1	1.2e-08
WP_158225423.1|2184149_2184884_+	peptidoglycan-binding protein	NA	E5E3R7	Burkholderia_phage	59.4	1.4e-09
WP_095434645.1|2184935_2185319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_146214386.1|2185331_2185640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095434647.1|2185662_2185917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_146214387.1|2186040_2186337_+	hypothetical protein	NA	B4UTS1	Rhizobium_phage	44.6	9.3e-05
WP_146214388.1|2186466_2187561_+	hypothetical protein	NA	G8DCV8	Silicibacter_phage	38.9	1.2e-52
>prophage 5
NZ_CP022998	Rhizobium sp. 11515TR strain 10195 chromosome, complete genome	4003789	2343637	2356111	4003789	tRNA	uncultured_Mediterranean_phage(88.89%)	12	NA	NA
WP_069612288.1|2343637_2344435_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.9	5.2e-34
WP_095434758.1|2344448_2345171_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	45.3	1.4e-38
WP_095434759.1|2345416_2345617_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	58.5	2.7e-08
WP_095434760.1|2345672_2346398_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_095434761.1|2346394_2347216_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.1	7.5e-52
WP_095434762.1|2347322_2348606_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.4	1.6e-96
WP_095434763.1|2348621_2349386_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	31.3	2.3e-23
WP_092715710.1|2349390_2350044_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	36.5	8.9e-16
WP_095434764.1|2350214_2351903_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	34.2	2.0e-14
WP_095436266.1|2351981_2352854_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_047634659.1|2353060_2353408_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_095434765.1|2353567_2356111_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	47.4	1.1e-56
>prophage 6
NZ_CP022998	Rhizobium sp. 11515TR strain 10195 chromosome, complete genome	4003789	2501170	2515173	4003789	tRNA	uncultured_Mediterranean_phage(62.5%)	11	NA	NA
WP_095434877.1|2501170_2504092_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.2	0.0e+00
WP_095436273.1|2504363_2504930_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	73.7	2.1e-45
WP_095436274.1|2505361_2505994_-	MarC family protein	NA	NA	NA	NA	NA
WP_095434879.1|2506218_2509014_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	34.1	6.2e-98
WP_095436275.1|2509170_2510061_-	NAD(P)-dependent oxidoreductase	NA	A0A2C9DSV6	Western_grey_kangaroopox_virus	34.1	3.0e-06
WP_015339886.1|2510448_2510607_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015339888.1|2511124_2511637_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	36.5	1.8e-24
WP_095434880.1|2511666_2512239_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	57.0	2.5e-46
WP_092715425.1|2512352_2512862_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	62.3	6.9e-48
WP_095434881.1|2512950_2514036_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_095434882.1|2514042_2515173_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	52.5	1.4e-101
>prophage 1
NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	1497349	155095	220248	1497349	plate,transposase	Planktothrix_phage(13.33%)	57	NA	NA
WP_095433215.1|155095_156314_+|transposase	IS3 family transposase	transposase	A0A1B0Z042	Pseudomonas_phage	53.0	1.2e-74
WP_095437852.1|156328_157666_-	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
WP_095437853.1|157745_157859_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_095437854.1|157881_159036_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_095437855.1|159041_160637_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_095437856.1|160718_162407_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_095437857.1|162403_164164_-	thiol reductant ABC exporter subunit CydD	NA	G9BWD6	Planktothrix_phage	33.2	1.5e-12
WP_095437858.1|164620_165334_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_095438908.1|165565_166858_-	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_095437859.1|166875_167580_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	28.9	6.3e-07
WP_095437860.1|167671_167983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095437861.1|168124_170059_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	26.7	1.9e-50
WP_095437862.1|170239_170995_-	glycosyltransferase family 25 protein	NA	A0A1S5NQ44	Burkholderia_phage	26.6	1.0e-07
WP_095437863.1|170998_171853_-	glycosyltransferase family 25 protein	NA	A0A1S5NQ44	Burkholderia_phage	27.2	1.7e-11
WP_095437865.1|172218_172896_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.6	1.6e-20
WP_095437866.1|172892_174230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095437867.1|174438_175086_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_095437868.1|175118_175418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_095437869.1|175427_175856_+	universal stress protein	NA	NA	NA	NA	NA
WP_095437870.1|176199_176595_+	cytochrome c	NA	NA	NA	NA	NA
WP_095437872.1|177425_178127_-|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
WP_095437873.1|178802_179066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095437874.1|179070_180603_-	RHS repeat protein	NA	NA	NA	NA	NA
WP_095437872.1|180588_181290_+|transposase	IS6 family transposase	transposase	NA	NA	NA	NA
WP_095437875.1|181974_182961_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_095437876.1|183064_184471_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_095437877.1|184474_186070_+	GMC family oxidoreductase N-terminal domain-containing protein	NA	A0A1V0SI18	Klosneuvirus	31.5	2.2e-55
WP_095437878.1|186128_187382_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095437879.1|187444_188311_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_095437880.1|188307_189345_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_095437881.1|189341_190046_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	26.1	1.4e-06
WP_095437882.1|190047_190764_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.4	9.2e-06
WP_095437883.1|190778_191495_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.4	5.4e-14
WP_095438909.1|191506_192451_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_095437884.1|192493_192883_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_095437885.1|192890_193670_-	MoaF N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_095437886.1|193689_194478_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.5	2.2e-08
WP_095437887.1|195041_195827_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_095437888.1|195839_197231_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_095437889.1|197267_197603_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095438910.1|197602_198469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_095437890.1|198526_199672_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	27.9	9.8e-34
WP_095437891.1|199811_200570_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_095437892.1|200566_201355_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_095437893.1|201457_202705_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_095437894.1|202715_203639_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_095437895.1|203635_204484_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_095437896.1|204497_205574_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	1.4e-26
WP_095437897.1|206443_207586_+	polysaccharide export protein	NA	NA	NA	NA	NA
WP_095437898.1|207597_208509_-	protein kinase	NA	NA	NA	NA	NA
WP_095437899.1|208505_209891_-	type VI secretion system-associated protein TagF	NA	I6PCV8	Cronobacter_phage	34.6	6.8e-05
WP_095437900.1|209901_213384_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_095437901.1|213380_214904_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_095437902.1|214900_216241_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_158225463.1|216237_217431_-	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_095437904.1|217420_218446_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_095437905.1|218466_220248_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
