assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	1	582714-583885	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Orphan	GTTTCAATCCCTCATAGGTACGATAAAAAC,GTTTCAATCCCTCATAGGTACGATAAAAAC,GTTTCAATCCCTCATAGG------TACGATAAAAAC	30,30,36	0	0	NA	NA	NA:NA:NA	17,17,16	17	Orphan	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA,NA	NA|205aa|up_9|NZ_CP017692.1_570936_571551_-	cd05540, UreG, urease accessory protein UreG	NA|226aa|up_8|NZ_CP017692.1_571600_572278_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|149aa|up_7|NZ_CP017692.1_572270_572717_-	PRK13261, ureE, urease accessory protein UreE; Provisional	NA|570aa|up_6|NZ_CP017692.1_572727_574437_-	PRK13207, ureC, urease subunit alpha; Reviewed	NA|112aa|up_5|NZ_CP017692.1_574433_574769_-	PRK13203, ureB, urease subunit beta; Reviewed	NA|102aa|up_4|NZ_CP017692.1_574813_575119_-	PRK13241, ureA, urease subunit gamma; Provisional	NA|466aa|up_3|NZ_CP017692.1_575723_577121_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|515aa|up_2|NZ_CP017692.1_578118_579663_-	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type	NA|339aa|up_1|NZ_CP017692.1_579680_580697_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|301aa|up_0|NZ_CP017692.1_581636_582539_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|312aa|down_0|NZ_CP017692.1_584067_585003_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|231aa|down_1|NZ_CP017692.1_585196_585889_-	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|537aa|down_2|NZ_CP017692.1_585902_587513_-	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|509aa|down_3|NZ_CP017692.1_587588_589115_-	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|152aa|down_4|NZ_CP017692.1_589128_589584_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|347aa|down_5|NZ_CP017692.1_589636_590677_-	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold	NA|283aa|down_6|NZ_CP017692.1_591058_591907_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|387aa|down_7|NZ_CP017692.1_592883_594044_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|148aa|down_8|NZ_CP017692.1_594043_594487_-	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|697aa|down_9|NZ_CP017692.1_594492_596583_-	COG3711, BglG, Transcriptional antiterminator [Transcription]
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	2	592008-592704	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no		cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Orphan	GTTTCAATCCCTCATAGGTACGATAAAAAC,GTTTCAATCCCTCATAGGTACGATAAAAAC,GTTTCAATCCCTCATAGG------TACGATAAAAAC	30,30,36	0	0	NA	NA	NA:NA:NA	10,10,9	10	Orphan	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA,NA|63aa|down_3|NZ_CP017692.1_596599_596788_-	NA|515aa|up_9|NZ_CP017692.1_578118_579663_-	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type	NA|339aa|up_8|NZ_CP017692.1_579680_580697_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|301aa|up_7|NZ_CP017692.1_581636_582539_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|312aa|up_6|NZ_CP017692.1_584067_585003_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|231aa|up_5|NZ_CP017692.1_585196_585889_-	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|537aa|up_4|NZ_CP017692.1_585902_587513_-	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|509aa|up_3|NZ_CP017692.1_587588_589115_-	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|152aa|up_2|NZ_CP017692.1_589128_589584_-	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family	NA|347aa|up_1|NZ_CP017692.1_589636_590677_-	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold	NA|283aa|up_0|NZ_CP017692.1_591058_591907_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|387aa|down_0|NZ_CP017692.1_592883_594044_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|148aa|down_1|NZ_CP017692.1_594043_594487_-	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|697aa|down_2|NZ_CP017692.1_594492_596583_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|63aa|down_3|NZ_CP017692.1_596599_596788_-	NA	NA|484aa|down_4|NZ_CP017692.1_596894_598346_-	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|168aa|down_5|NZ_CP017692.1_598484_598988_-	COG2405, COG2405, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|97aa|down_6|NZ_CP017692.1_598980_599271_-	pfam03683, UPF0175, Uncharacterized protein family (UPF0175)	NA|487aa|down_7|NZ_CP017692.1_599765_601226_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|397aa|down_8|NZ_CP017692.1_601384_602575_-	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like	NA|570aa|down_9|NZ_CP017692.1_602853_604563_-	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	3	694107-694199	3	CRISPRCasFinder	no	cas14j	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Unclear	GGCTGATGTGCACGAAGGGAATGAACGAT	29	0	0	NA	NA	NA	1	1	TypeV	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA|224aa|up_0|NZ_CP017692.1_692802_693474_+,NA|111aa|down_9|NZ_CP017692.1_706192_706525_+	NA|234aa|up_9|NZ_CP017692.1_683121_683823_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|270aa|up_8|NZ_CP017692.1_683819_684629_-	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|175aa|up_7|NZ_CP017692.1_684764_685289_-	pfam05573, NosL, NosL	NA|427aa|up_6|NZ_CP017692.1_685285_686566_-	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD	cas14j|371aa|up_5|NZ_CP017692.1_686864_687977_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|301aa|up_4|NZ_CP017692.1_688243_689146_-	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase	NA|486aa|up_3|NZ_CP017692.1_689253_690711_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|122aa|up_2|NZ_CP017692.1_691247_691613_+	pfam01638, HxlR, HxlR-like helix-turn-helix	NA|225aa|up_1|NZ_CP017692.1_692112_692787_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|224aa|up_0|NZ_CP017692.1_692802_693474_+	NA	NA|186aa|down_0|NZ_CP017692.1_694370_694928_-	TIGR03127, RuMP_HxlB, 6-phospho 3-hexuloisomerase	NA|212aa|down_1|NZ_CP017692.1_694931_695567_-	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase	NA|36aa|down_2|NZ_CP017692.1_695944_696052_-	pfam13171, DUF4004, Protein of unknown function (DUF4004)	NA|578aa|down_3|NZ_CP017692.1_696247_697981_+	COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism]	cas14j|371aa|down_4|NZ_CP017692.1_699584_700697_-	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|388aa|down_5|NZ_CP017692.1_700906_702070_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|138aa|down_6|NZ_CP017692.1_702312_702726_-	PRK05463, PRK05463, putative hydro-lyase	NA|816aa|down_7|NZ_CP017692.1_702697_705145_-	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|109aa|down_8|NZ_CP017692.1_705137_705464_-	cd11532, NTP-PPase_COG4997, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|111aa|down_9|NZ_CP017692.1_706192_706525_+	NA
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	4	1777469-1777699	4,3,3	CRISPRCasFinder,CRT,PILER-CR	no	csa3	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Type I-A	GTTTCAATCCCTCATAGGTACGATAAAAAC,GTTTCAATCCCTCATAGGTACGATAAAAAC,ATAGTTTCAATCCCTCATAGG------TACGATAAAAAC	30,30,39	0	0	NA	NA	NA:NA:NA	3,3,2	3	Orphan	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA|107aa|up_5|NZ_CP017692.1_1770743_1771064_+,NA|77aa|up_1|NZ_CP017692.1_1775708_1775939_+,NA|27aa|down_4|NZ_CP017692.1_1783580_1783661_-,NA|84aa|down_5|NZ_CP017692.1_1783995_1784247_+	NA|140aa|up_9|NZ_CP017692.1_1766465_1766885_-	PRK13530, PRK13530, arsenate reductase (thioredoxin)	csa3|116aa|up_8|NZ_CP017692.1_1767107_1767455_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|128aa|up_7|NZ_CP017692.1_1767652_1768036_-	pfam07098, DUF1360, Protein of unknown function (DUF1360)	NA|298aa|up_6|NZ_CP017692.1_1769660_1770554_-	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP	NA|107aa|up_5|NZ_CP017692.1_1770743_1771064_+	NA	NA|423aa|up_4|NZ_CP017692.1_1770953_1772222_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|456aa|up_3|NZ_CP017692.1_1772383_1773751_+	pfam06782, UPF0236, Uncharacterized protein family (UPF0236)	NA|151aa|up_2|NZ_CP017692.1_1774696_1775149_-	pfam04892, VanZ, VanZ like family	NA|77aa|up_1|NZ_CP017692.1_1775708_1775939_+	NA	NA|403aa|up_0|NZ_CP017692.1_1776127_1777336_-	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085	NA|375aa|down_0|NZ_CP017692.1_1778071_1779196_-	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|193aa|down_1|NZ_CP017692.1_1779185_1779764_-	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|678aa|down_2|NZ_CP017692.1_1779782_1781816_-	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|561aa|down_3|NZ_CP017692.1_1781831_1783514_-	pfam03814, KdpA, Potassium-transporting ATPase A subunit	NA|27aa|down_4|NZ_CP017692.1_1783580_1783661_-	NA	NA|84aa|down_5|NZ_CP017692.1_1783995_1784247_+	NA	NA|395aa|down_6|NZ_CP017692.1_1785202_1786387_-	cd08021, M20_Acy1_YhaA-like, M20 Peptidase aminoacylase 1 subfamily, includes Bacillus subtilis YhaA and Staphylococcus aureus amidohydrolase, SACOL0085	NA|447aa|down_7|NZ_CP017692.1_1786512_1787853_-	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|437aa|down_8|NZ_CP017692.1_1788093_1789404_-	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein	NA|449aa|down_9|NZ_CP017692.1_1789725_1791072_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	5	1905026-1905112	5	CRISPRCasFinder	no		cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Orphan	GAGAGAATGCAAAAAAACGACCATTC	26	0	0	NA	NA	NA	1	1	Orphan	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA,NA	NA|274aa|up_9|NZ_CP017692.1_1895707_1896529_-	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion]	NA|277aa|up_8|NZ_CP017692.1_1896550_1897381_-	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion]	NA|334aa|up_7|NZ_CP017692.1_1897504_1898506_-	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|88aa|up_6|NZ_CP017692.1_1898609_1898873_-	pfam12116, SpoIIID, Stage III sporulation protein D	NA|170aa|up_5|NZ_CP017692.1_1899184_1899694_+	pfam12690, BsuPI, Intracellular proteinase inhibitor	NA|178aa|up_4|NZ_CP017692.1_1899904_1900438_-	COG2059, ChrA, Chromate transport protein ChrA [Inorganic ion transport and metabolism]	NA|535aa|up_3|NZ_CP017692.1_1900463_1902068_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|150aa|up_2|NZ_CP017692.1_1902230_1902680_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|271aa|up_1|NZ_CP017692.1_1902843_1903656_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|343aa|up_0|NZ_CP017692.1_1903783_1904812_-	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D	NA|435aa|down_0|NZ_CP017692.1_1905150_1906455_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|252aa|down_1|NZ_CP017692.1_1906486_1907242_-	pfam08680, DUF1779, TATA-box binding	NA|80aa|down_2|NZ_CP017692.1_1907518_1907758_-	COG4836, COG4836, Predicted membrane protein [Function unknown]	NA|498aa|down_3|NZ_CP017692.1_1907870_1909364_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|514aa|down_4|NZ_CP017692.1_1909369_1910911_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|618aa|down_5|NZ_CP017692.1_1910907_1912761_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed	NA|102aa|down_6|NZ_CP017692.1_1912779_1913085_-	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK	NA|174aa|down_7|NZ_CP017692.1_1913081_1913603_-	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J	NA|140aa|down_8|NZ_CP017692.1_1913599_1914019_-	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI	NA|334aa|down_9|NZ_CP017692.1_1914280_1915282_-	PRK06076, PRK06076, NADH-quinone oxidoreductase subunit NuoH
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	6	2425933-2426293	4,6,4	PILER-CR,CRISPRCasFinder,CRT	no	cas6	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Unclear	GTTTCAATCCCTCATAGG------TACGATAAAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC	36,30,30	0	0	NA	NA	NA:NA:NA	5,5,5	5	Unclear	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA,NA|58aa|down_4|NZ_CP017692.1_2433322_2433496_+,NA|71aa|down_5|NZ_CP017692.1_2433656_2433869_+,NA|160aa|down_6|NZ_CP017692.1_2435337_2435817_-	NA|230aa|up_9|NZ_CP017692.1_2410731_2411421_-	TIGR03740, galliderm_ABC, gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit	NA|210aa|up_8|NZ_CP017692.1_2412023_2412653_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|376aa|up_7|NZ_CP017692.1_2412907_2414035_-	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter	NA|293aa|up_6|NZ_CP017692.1_2414713_2415592_+	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|244aa|up_5|NZ_CP017692.1_2416439_2417171_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|497aa|up_4|NZ_CP017692.1_2417315_2418806_+	TIGR02677, conserved_hypothetical_protein, TIGR02677 family protein	NA|399aa|up_3|NZ_CP017692.1_2418808_2420005_+	TIGR02678, hypothetical_protein, TIGR02678 family protein	NA|1374aa|up_2|NZ_CP017692.1_2419964_2424086_+	TIGR02680, conserved_hypothetical_protein, TIGR02680 family protein	NA|407aa|up_1|NZ_CP017692.1_2424082_2425303_+	TIGR02679, conserved_hypothetical_protein, TIGR02679 family protein	NA|122aa|up_0|NZ_CP017692.1_2425370_2425736_+	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|378aa|down_0|NZ_CP017692.1_2427578_2428712_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|116aa|down_1|NZ_CP017692.1_2428828_2429176_+	pfam14079, DUF4260, Domain of unknown function (DUF4260)	NA|186aa|down_2|NZ_CP017692.1_2430581_2431139_+	pfam14690, zf-ISL3, zinc-finger of transposase IS204/IS1001/IS1096/IS1165	NA|267aa|down_3|NZ_CP017692.1_2432526_2433327_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|58aa|down_4|NZ_CP017692.1_2433322_2433496_+	NA	NA|71aa|down_5|NZ_CP017692.1_2433656_2433869_+	NA	NA|160aa|down_6|NZ_CP017692.1_2435337_2435817_-	NA	NA|291aa|down_7|NZ_CP017692.1_2436031_2436904_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	cas6|249aa|down_8|NZ_CP017692.1_2436952_2437699_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|295aa|down_9|NZ_CP017692.1_2438267_2439152_+	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	7	2439698-2440061	5,7,5	PILER-CR,CRISPRCasFinder,CRT	no	cas6	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Unclear	GTTTCAATCCCTCATAGG------TACGATAAAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC	36,30,30	0	0	NA	NA	NA:NA:NA	5,5,5	5	Unclear	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA|58aa|up_5|NZ_CP017692.1_2433322_2433496_+,NA|71aa|up_4|NZ_CP017692.1_2433656_2433869_+,NA|160aa|up_3|NZ_CP017692.1_2435337_2435817_-,NA|175aa|down_3|NZ_CP017692.1_2443510_2444035_-,NA|128aa|down_4|NZ_CP017692.1_2444215_2444599_+	NA|378aa|up_9|NZ_CP017692.1_2427578_2428712_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|116aa|up_8|NZ_CP017692.1_2428828_2429176_+	pfam14079, DUF4260, Domain of unknown function (DUF4260)	NA|186aa|up_7|NZ_CP017692.1_2430581_2431139_+	pfam14690, zf-ISL3, zinc-finger of transposase IS204/IS1001/IS1096/IS1165	NA|267aa|up_6|NZ_CP017692.1_2432526_2433327_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|58aa|up_5|NZ_CP017692.1_2433322_2433496_+	NA	NA|71aa|up_4|NZ_CP017692.1_2433656_2433869_+	NA	NA|160aa|up_3|NZ_CP017692.1_2435337_2435817_-	NA	NA|291aa|up_2|NZ_CP017692.1_2436031_2436904_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	cas6|249aa|up_1|NZ_CP017692.1_2436952_2437699_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|295aa|up_0|NZ_CP017692.1_2438267_2439152_+	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|349aa|down_0|NZ_CP017692.1_2440358_2441405_+	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates	NA|411aa|down_1|NZ_CP017692.1_2441465_2442698_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|218aa|down_2|NZ_CP017692.1_2442897_2443551_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|175aa|down_3|NZ_CP017692.1_2443510_2444035_-	NA	NA|128aa|down_4|NZ_CP017692.1_2444215_2444599_+	NA	NA|770aa|down_5|NZ_CP017692.1_2445696_2448006_-	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|190aa|down_6|NZ_CP017692.1_2448081_2448651_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|458aa|down_7|NZ_CP017692.1_2448821_2450195_-	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK	NA|221aa|down_8|NZ_CP017692.1_2450184_2450847_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|142aa|down_9|NZ_CP017692.1_2451026_2451452_+	pfam03929, PepSY_TM, PepSY-associated TM region
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	8	2927299-2928461	6,8,6	PILER-CR,CRISPRCasFinder,CRT	no	csx1,cas6,cas10,csx10gr5,csm3gr7,csm6,RT	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Type III-D,Type III-B,Type III-C,Type III-A	CTTTTTGAGAGGTGGCCTCGTTGAGAGGATTGAAAC,CTTTTTGAGAGGTGGCCTCGTTGAGAGGATTGAAAC,CTTTTTGAGAGGTGGCCTCGTTGAGAGGATTGAAACA	36,36,37	0	0	NA	NA	NA:NA:NA	14,15,15	15	TypeIII-D,TypeIII-B,TypeIII-C,TypeIII-A	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA,csx1|440aa|down_0|NZ_CP017692.1_2928734_2930054_+,NA|438aa|down_1|NZ_CP017692.1_2930050_2931364_+,NA|132aa|down_6|NZ_CP017692.1_2935935_2936331_+	NA|86aa|up_9|NZ_CP017692.1_2910454_2910712_+	pfam14069, SpoVIF, Stage VI sporulation protein F	NA|145aa|up_8|NZ_CP017692.1_2910756_2911191_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|175aa|up_7|NZ_CP017692.1_2911187_2911712_-	PRK13679, PRK13679, hypothetical protein; Provisional	NA|243aa|up_6|NZ_CP017692.1_2911750_2912479_-	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]	NA|368aa|up_5|NZ_CP017692.1_2912981_2914085_+	PRK08247, PRK08247, methionine biosynthesis PLP-dependent protein	NA|393aa|up_4|NZ_CP017692.1_2914088_2915267_+	PRK08064, PRK08064, cystathionine beta-lyase MetC	NA|381aa|up_3|NZ_CP017692.1_2915305_2916448_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|440aa|up_2|NZ_CP017692.1_2923292_2924612_-	TIGR01883, Uncharacterized_protein_YqjE, peptidase T-like protein	NA|308aa|up_1|NZ_CP017692.1_2924697_2925621_+	sd00006, TPR, Tetratricopeptide repeat	NA|146aa|up_0|NZ_CP017692.1_2925630_2926068_+	pfam14101, DUF4275, Domain of unknown function (DUF4275)	csx1|440aa|down_0|NZ_CP017692.1_2928734_2930054_+	NA	NA|438aa|down_1|NZ_CP017692.1_2930050_2931364_+	NA	cas6|318aa|down_2|NZ_CP017692.1_2931353_2932307_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	cas10|566aa|down_3|NZ_CP017692.1_2932319_2934017_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	NA|180aa|down_4|NZ_CP017692.1_2934135_2934675_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx10gr5|408aa|down_5|NZ_CP017692.1_2934678_2935902_+	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family	NA|132aa|down_6|NZ_CP017692.1_2935935_2936331_+	NA	csm3gr7|270aa|down_7|NZ_CP017692.1_2936314_2937124_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm3gr7|308aa|down_8|NZ_CP017692.1_2937087_2938011_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	NA|156aa|down_9|NZ_CP017692.1_2938007_2938475_+	TIGR02814, omega-3_polyunsaturated_fatty_acid_synthase_PfaD, PfaD family protein
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	9	2943438-2944446	7,9,7	PILER-CR,CRISPRCasFinder,CRT	no	csx1,cas6,cas10,csx10gr5,csm3gr7,csm6,RT,cas1,cas2	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Type III-D,Type III-B,Type III-C,Type III-A	CTTTTAAAAGACTGACCTCGTTCAGAGGATTAA,CTTTTAAAAGACTGACCTCGTTCAGAGGATTAAGAC,CTTTTAAAAGACTGACCTCGTTCAGAGGATTAAGAC	33,36,36	0	0	NA	NA	NA:NA:NA	13,13,13	13	TypeIII-D,TypeIII-B,TypeIII-C,TypeIII-A	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA|132aa|up_5|NZ_CP017692.1_2935935_2936331_+,NA|431aa|up_0|NZ_CP017692.1_2939588_2940881_+,NA|260aa|down_4|NZ_CP017692.1_2952639_2953419_+,NA|186aa|down_5|NZ_CP017692.1_2954607_2955165_+,NA|56aa|down_7|NZ_CP017692.1_2957351_2957519_+	cas6|318aa|up_9|NZ_CP017692.1_2931353_2932307_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	cas10|566aa|up_8|NZ_CP017692.1_2932319_2934017_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	NA|180aa|up_7|NZ_CP017692.1_2934135_2934675_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx10gr5|408aa|up_6|NZ_CP017692.1_2934678_2935902_+	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family	NA|132aa|up_5|NZ_CP017692.1_2935935_2936331_+	NA	csm3gr7|270aa|up_4|NZ_CP017692.1_2936314_2937124_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm3gr7|308aa|up_3|NZ_CP017692.1_2937087_2938011_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	NA|156aa|up_2|NZ_CP017692.1_2938007_2938475_+	TIGR02814, omega-3_polyunsaturated_fatty_acid_synthase_PfaD, PfaD family protein	csm6|331aa|up_1|NZ_CP017692.1_2938570_2939563_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	NA|431aa|up_0|NZ_CP017692.1_2939588_2940881_+	NA	RT|918aa|down_0|NZ_CP017692.1_2945154_2947908_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	cas1|332aa|down_1|NZ_CP017692.1_2947904_2948900_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|95aa|down_2|NZ_CP017692.1_2948865_2949150_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|511aa|down_3|NZ_CP017692.1_2951044_2952577_+	CHL00195, ycf46, Ycf46; Provisional	NA|260aa|down_4|NZ_CP017692.1_2952639_2953419_+	NA	NA|186aa|down_5|NZ_CP017692.1_2954607_2955165_+	NA	NA|267aa|down_6|NZ_CP017692.1_2956549_2957350_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|56aa|down_7|NZ_CP017692.1_2957351_2957519_+	NA	NA|482aa|down_8|NZ_CP017692.1_2957614_2959060_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|495aa|down_9|NZ_CP017692.1_2959265_2960750_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]
GCF_002243605.1_ASM224360v1	NZ_CP017692	Geobacillus lituanicus strain N-3 chromosome, complete genome	10	2949410-2950566	8,10,8	PILER-CR,CRISPRCasFinder,CRT	no	cas6,cas10,csx10gr5,csm3gr7,csm6,RT,cas1,cas2	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	Type III-D,Type III-B,Type III-C,Type III-A	GTTTCAATCCTCTAAACGAGGTCATCTTTTAAAAAG,CTTTTTAAAAGATGACCTCGTTTAGAGGATTGAAAC,CTTTTTAAAAGATGACCTCGTTTAGAGGATTGAAACA	36,36,37	0	0	NA	NA	NA:NA:NA	14,15,15	15	TypeIII-D,TypeIII-B,TypeIII-C,TypeIII-A	cas14k,csa3,DEDDh,c2c4_V-U1,cas3,DinG,cas14j,RT,cas6,csx1,cas10,csx10gr5,csm3gr7,csm6,cas1,cas2	NA|132aa|up_8|NZ_CP017692.1_2935935_2936331_+,NA|431aa|up_3|NZ_CP017692.1_2939588_2940881_+,NA|260aa|down_1|NZ_CP017692.1_2952639_2953419_+,NA|186aa|down_2|NZ_CP017692.1_2954607_2955165_+,NA|56aa|down_4|NZ_CP017692.1_2957351_2957519_+	csx10gr5|408aa|up_9|NZ_CP017692.1_2934678_2935902_+	TIGR02674, cas_cyan_RAMP_2, CRISPR-associated RAMP protein, Csx10 family	NA|132aa|up_8|NZ_CP017692.1_2935935_2936331_+	NA	csm3gr7|270aa|up_7|NZ_CP017692.1_2936314_2937124_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm3gr7|308aa|up_6|NZ_CP017692.1_2937087_2938011_+	cd09683, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	NA|156aa|up_5|NZ_CP017692.1_2938007_2938475_+	TIGR02814, omega-3_polyunsaturated_fatty_acid_synthase_PfaD, PfaD family protein	csm6|331aa|up_4|NZ_CP017692.1_2938570_2939563_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	NA|431aa|up_3|NZ_CP017692.1_2939588_2940881_+	NA	RT|918aa|up_2|NZ_CP017692.1_2945154_2947908_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	cas1|332aa|up_1|NZ_CP017692.1_2947904_2948900_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|95aa|up_0|NZ_CP017692.1_2948865_2949150_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|511aa|down_0|NZ_CP017692.1_2951044_2952577_+	CHL00195, ycf46, Ycf46; Provisional	NA|260aa|down_1|NZ_CP017692.1_2952639_2953419_+	NA	NA|186aa|down_2|NZ_CP017692.1_2954607_2955165_+	NA	NA|267aa|down_3|NZ_CP017692.1_2956549_2957350_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|56aa|down_4|NZ_CP017692.1_2957351_2957519_+	NA	NA|482aa|down_5|NZ_CP017692.1_2957614_2959060_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|495aa|down_6|NZ_CP017692.1_2959265_2960750_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|368aa|down_7|NZ_CP017692.1_2960739_2961843_+	cd17266, RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Staphylococcus aureus subsp	NA|483aa|down_8|NZ_CP017692.1_2961911_2963360_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|985aa|down_9|NZ_CP017692.1_2963526_2966481_+	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]
